RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 HNRNPUL2Q1KMD3 747 aaKnown RBP17.08■□□□□ 0.32
LINC02561-201ENST00000449457 SAMD9Q5K651 1589 aa17.07■□□□□ 0.32
LINC02561-201ENST00000449457 RICTORQ6R327 1708 aa17.06■□□□□ 0.32
LINC02561-201ENST00000449457 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
LINC02561-201ENST00000449457 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
LINC02561-201ENST00000449457 NEO1Q92859 1461 aa17.05■□□□□ 0.32
LINC02561-201ENST00000449457 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
LINC02561-201ENST00000449457 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.32
LINC02561-201ENST00000449457 MLECQ14165 292 aa17.01■□□□□ 0.31
LINC02561-201ENST00000449457 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
LINC02561-201ENST00000449457 DENND4BO75064 1496 aaPredicted RBP16.98■□□□□ 0.31
LINC02561-201ENST00000449457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC02561-201ENST00000449457 FER1L4A9Z1Z3 1794 aa16.97■□□□□ 0.31
LINC02561-201ENST00000449457 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
LINC02561-201ENST00000449457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
LINC02561-201ENST00000449457 FANCAO15360 1455 aa16.96■□□□□ 0.31
LINC02561-201ENST00000449457 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.3
LINC02561-201ENST00000449457 ZFYVE16Q7Z3T8 1539 aa16.96■□□□□ 0.3
LINC02561-201ENST00000449457 PHLDB1Q86UU1 1377 aa16.95■□□□□ 0.3
LINC02561-201ENST00000449457 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
LINC02561-201ENST00000449457 ZMYM4Q5VZL5 1548 aa16.92■□□□□ 0.3
LINC02561-201ENST00000449457 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
LINC02561-201ENST00000449457 CFAP74Q9C0B2 1584 aa16.9■□□□□ 0.3
LINC02561-201ENST00000449457 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
LINC02561-201ENST00000449457 EFCAB5A4FU69 1503 aa16.89■□□□□ 0.29
LINC02561-201ENST00000449457 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
LINC02561-201ENST00000449457 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
LINC02561-201ENST00000449457 POGZQ7Z3K3 1410 aa16.85■□□□□ 0.29
LINC02561-201ENST00000449457 PLEKHD1A6NEE1 506 aa16.84■□□□□ 0.29
LINC02561-201ENST00000449457 DISP3Q9P2K9 1392 aa16.84■□□□□ 0.29
LINC02561-201ENST00000449457 KIF14Q15058 1648 aa16.83■□□□□ 0.28
LINC02561-201ENST00000449457 PREX1Q8TCU6 1659 aa16.83■□□□□ 0.28
LINC02561-201ENST00000449457 SCAPERQ9BY12 1400 aa16.83■□□□□ 0.28
LINC02561-201ENST00000449457 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.28
LINC02561-201ENST00000449457 STRCQ7RTU9 1775 aa16.82■□□□□ 0.28
LINC02561-201ENST00000449457 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
LINC02561-201ENST00000449457 C9orf84Q5VXU9 1444 aa16.78■□□□□ 0.28
LINC02561-201ENST00000449457 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
LINC02561-201ENST00000449457 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.27
LINC02561-201ENST00000449457 PLCH2O75038 1416 aa16.76■□□□□ 0.27
LINC02561-201ENST00000449457 ATP10AO60312 1499 aa16.75■□□□□ 0.27
LINC02561-201ENST00000449457 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
LINC02561-201ENST00000449457 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
LINC02561-201ENST00000449457 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
LINC02561-201ENST00000449457 ABCA6Q8N139 1617 aa16.74■□□□□ 0.27
LINC02561-201ENST00000449457 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
LINC02561-201ENST00000449457 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
LINC02561-201ENST00000449457 C3P01024 1663 aa16.72■□□□□ 0.27
LINC02561-201ENST00000449457 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
LINC02561-201ENST00000449457 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
LINC02561-201ENST00000449457 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
LINC02561-201ENST00000449457 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
LINC02561-201ENST00000449457 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
LINC02561-201ENST00000449457 KDM5CP41229 1560 aa16.68■□□□□ 0.26
LINC02561-201ENST00000449457 SOCS7O14512 581 aa16.67■□□□□ 0.26
LINC02561-201ENST00000449457 ZNF518AQ6AHZ1 1483 aa16.66■□□□□ 0.26
LINC02561-201ENST00000449457 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
LINC02561-201ENST00000449457 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
LINC02561-201ENST00000449457 LTBP4Q8N2S1 1624 aa16.65■□□□□ 0.26
LINC02561-201ENST00000449457 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
LINC02561-201ENST00000449457 EFCAB2Q5VUJ9 269 aa16.64■□□□□ 0.25
LINC02561-201ENST00000449457 EEA1Q15075 1411 aa16.62■□□□□ 0.25
LINC02561-201ENST00000449457 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
LINC02561-201ENST00000449457 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
LINC02561-201ENST00000449457 ABCC1P33527 1531 aa16.6■□□□□ 0.25
LINC02561-201ENST00000449457 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
LINC02561-201ENST00000449457 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
LINC02561-201ENST00000449457 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
LINC02561-201ENST00000449457 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
LINC02561-201ENST00000449457 NCOA1Q15788 1441 aa16.58■□□□□ 0.24
LINC02561-201ENST00000449457 CAMSAP1Q5T5Y3 1602 aa16.57■□□□□ 0.24
LINC02561-201ENST00000449457 REREQ9P2R6 1566 aa16.57■□□□□ 0.24
LINC02561-201ENST00000449457 PTPRTO14522 1441 aa16.57■□□□□ 0.24
LINC02561-201ENST00000449457 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
LINC02561-201ENST00000449457 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
LINC02561-201ENST00000449457 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
LINC02561-201ENST00000449457 CLIP1P30622 1438 aa16.54■□□□□ 0.24
LINC02561-201ENST00000449457 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
LINC02561-201ENST00000449457 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
LINC02561-201ENST00000449457 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
LINC02561-201ENST00000449457 SETD1BQ9UPS6 1966 aaKnown RBP16.54■□□□□ 0.24
LINC02561-201ENST00000449457 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
LINC02561-201ENST00000449457 AGLP35573 1532 aa16.52■□□□□ 0.24
LINC02561-201ENST00000449457 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
LINC02561-201ENST00000449457 SYCP2Q9BX26 1530 aa16.51■□□□□ 0.23
LINC02561-201ENST00000449457 ESF1Q9H501 851 aaKnown RBP16.51■□□□□ 0.23
LINC02561-201ENST00000449457 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
LINC02561-201ENST00000449457 SAMD9LQ8IVG5 1584 aa16.51■□□□□ 0.23
LINC02561-201ENST00000449457 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
LINC02561-201ENST00000449457 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
LINC02561-201ENST00000449457 UBAP1LF5GYI3 381 aa16.47■□□□□ 0.23
LINC02561-201ENST00000449457 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
LINC02561-201ENST00000449457 ZNF142P52746 1687 aaPredicted RBP16.44■□□□□ 0.22
LINC02561-201ENST00000449457 CEP170BQ9Y4F5 1589 aaPredicted RBP16.44■□□□□ 0.22
LINC02561-201ENST00000449457 ZMYM3Q14202 1370 aa16.43■□□□□ 0.22
LINC02561-201ENST00000449457 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC02561-201ENST00000449457 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
LINC02561-201ENST00000449457 IQSEC2Q5JU85 1478 aa16.42■□□□□ 0.22
LINC02561-201ENST00000449457 ATP7AQ04656 1500 aa16.42■□□□□ 0.22
LINC02561-201ENST00000449457 INO80Q9ULG1 1556 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms