RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
PRDM15-208ENST00000449395 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
PRDM15-208ENST00000449395 ANP32EQ9BTT0 268 aa13.66□□□□□ -0.22
PRDM15-208ENST00000449395 TRIM44Q96DX7 344 aaPredicted RBP13.66□□□□□ -0.22
PRDM15-208ENST00000449395 CDK11BP21127 795 aaKnown RBP13.65□□□□□ -0.22
PRDM15-208ENST00000449395 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
PRDM15-208ENST00000449395 UBAP1LF5GYI3 381 aa13.64□□□□□ -0.23
PRDM15-208ENST00000449395 TNNT2P45379 298 aaPredicted RBP13.64□□□□□ -0.23
PRDM15-208ENST00000449395 CASC1Q6TDU7 716 aa13.63□□□□□ -0.23
PRDM15-208ENST00000449395 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
PRDM15-208ENST00000449395 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
PRDM15-208ENST00000449395 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
PRDM15-208ENST00000449395 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
PRDM15-208ENST00000449395 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
PRDM15-208ENST00000449395 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
PRDM15-208ENST00000449395 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
PRDM15-208ENST00000449395 USP35Q9P2H5 1018 aa13.6□□□□□ -0.23
PRDM15-208ENST00000449395 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
PRDM15-208ENST00000449395 SPAG9O60271 1321 aaKnown RBP13.59□□□□□ -0.23
PRDM15-208ENST00000449395 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
PRDM15-208ENST00000449395 PPP4R2Q9NY27 417 aa13.58□□□□□ -0.24
PRDM15-208ENST00000449395 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
PRDM15-208ENST00000449395 PTPRGP23470 1445 aa13.56□□□□□ -0.24
PRDM15-208ENST00000449395 KRI1Q8N9T8 703 aaKnown RBP13.56□□□□□ -0.24
PRDM15-208ENST00000449395 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
PRDM15-208ENST00000449395 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
PRDM15-208ENST00000449395 CWC22Q9HCG8 908 aaKnown RBP13.56□□□□□ -0.24
PRDM15-208ENST00000449395 ZRSR1Q15695 479 aaKnown RBP13.56□□□□□ -0.24
PRDM15-208ENST00000449395 PSME1Q06323 249 aa13.55□□□□□ -0.24
PRDM15-208ENST00000449395 PTMAP06454 111 aaKnown RBP13.55□□□□□ -0.24
PRDM15-208ENST00000449395 RGS3P49796 1198 aa13.55□□□□□ -0.24
PRDM15-208ENST00000449395 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
PRDM15-208ENST00000449395 TPRNQ4KMQ1 711 aa13.54□□□□□ -0.24
PRDM15-208ENST00000449395 HNRNPMP52272 730 aaKnown RBP eCLIP13.54□□□□□ -0.243e-8■■■■■ 32
PRDM15-208ENST00000449395 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
PRDM15-208ENST00000449395 U2SURPO15042 1029 aaKnown RBP13.51□□□□□ -0.25
PRDM15-208ENST00000449395 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
PRDM15-208ENST00000449395 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
PRDM15-208ENST00000449395 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
PRDM15-208ENST00000449395 TMF1P82094 1093 aa13.5□□□□□ -0.25
PRDM15-208ENST00000449395 DCAF11Q8TEB1 546 aa13.5□□□□□ -0.25
PRDM15-208ENST00000449395 MS4A1P11836 297 aa13.5□□□□□ -0.25
PRDM15-208ENST00000449395 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
PRDM15-208ENST00000449395 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
PRDM15-208ENST00000449395 DNTTIP2Q5QJE6 756 aaKnown RBP13.49□□□□□ -0.25
PRDM15-208ENST00000449395 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
PRDM15-208ENST00000449395 CLSTN1O94985 981 aa13.49□□□□□ -0.25
PRDM15-208ENST00000449395 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
PRDM15-208ENST00000449395 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
PRDM15-208ENST00000449395 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
PRDM15-208ENST00000449395 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
PRDM15-208ENST00000449395 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
PRDM15-208ENST00000449395 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
PRDM15-208ENST00000449395 C16orf71Q8IYS4 520 aaPredicted RBP13.46□□□□□ -0.25
PRDM15-208ENST00000449395 HDGFL2Q7Z4V5 671 aaPredicted RBP13.45□□□□□ -0.26
PRDM15-208ENST00000449395 NGLY1Q96IV0 654 aa13.45□□□□□ -0.26
PRDM15-208ENST00000449395 ERICH6BQ5W0A0 696 aa13.44□□□□□ -0.26
PRDM15-208ENST00000449395 TOM1O60784 492 aa13.44□□□□□ -0.26
PRDM15-208ENST00000449395 PDE3BQ13370 1112 aa13.44□□□□□ -0.26
PRDM15-208ENST00000449395 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
PRDM15-208ENST00000449395 AMPHP49418 695 aa13.44□□□□□ -0.26
PRDM15-208ENST00000449395 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
PRDM15-208ENST00000449395 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
PRDM15-208ENST00000449395 POGZQ7Z3K3 1410 aa13.42□□□□□ -0.26
PRDM15-208ENST00000449395 FGD1P98174 961 aa13.42□□□□□ -0.26
PRDM15-208ENST00000449395 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
PRDM15-208ENST00000449395 KCNJ4P48050 445 aa13.41□□□□□ -0.26
PRDM15-208ENST00000449395 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
PRDM15-208ENST00000449395 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
PRDM15-208ENST00000449395 SETD5Q9C0A6 1442 aa13.4□□□□□ -0.26
PRDM15-208ENST00000449395 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
PRDM15-208ENST00000449395 CCER2I3L3R5 266 aa13.4□□□□□ -0.26
PRDM15-208ENST00000449395 GRM1Q13255 1194 aa13.4□□□□□ -0.27
PRDM15-208ENST00000449395 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
PRDM15-208ENST00000449395 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
PRDM15-208ENST00000449395 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
PRDM15-208ENST00000449395 ESCO1Q5FWF5 840 aa13.39□□□□□ -0.27
PRDM15-208ENST00000449395 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.277e-7■■■■■ 44.7
PRDM15-208ENST00000449395 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
PRDM15-208ENST00000449395 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
PRDM15-208ENST00000449395 CHMP3Q9Y3E7 222 aa13.38□□□□□ -0.27
PRDM15-208ENST00000449395 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
PRDM15-208ENST00000449395 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
PRDM15-208ENST00000449395 TAF7LQ5H9L4 462 aa13.37□□□□□ -0.27
PRDM15-208ENST00000449395 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
PRDM15-208ENST00000449395 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
PRDM15-208ENST00000449395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRDM15-208ENST00000449395 PKD2Q13563 968 aa13.35□□□□□ -0.27
PRDM15-208ENST00000449395 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
PRDM15-208ENST00000449395 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
PRDM15-208ENST00000449395 DISP3Q9P2K9 1392 aa13.34□□□□□ -0.27
PRDM15-208ENST00000449395 MCCP23508 829 aa13.33□□□□□ -0.28
PRDM15-208ENST00000449395 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
PRDM15-208ENST00000449395 VPS8Q8N3P4 1428 aa13.33□□□□□ -0.28
PRDM15-208ENST00000449395 HSPA2P54652 639 aa13.32□□□□□ -0.28
PRDM15-208ENST00000449395 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
PRDM15-208ENST00000449395 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
PRDM15-208ENST00000449395 NRDCO43847 1150 aa13.3□□□□□ -0.28
PRDM15-208ENST00000449395 RAPGEF3O95398 923 aa13.3□□□□□ -0.28
PRDM15-208ENST00000449395 CCAR1Q8IX12 1150 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms