RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 MLECQ14165 292 aa23.21■■□□□ 1.31
CDK3-202ENST00000448471 SCAPERQ9BY12 1400 aa23.19■■□□□ 1.3
CDK3-202ENST00000448471 PLCH2O75038 1416 aa23.18■■□□□ 1.3
CDK3-202ENST00000448471 FER1L4A9Z1Z3 1794 aa23.17■■□□□ 1.3
CDK3-202ENST00000448471 CERKQ8TCT0 537 aa23.14■■□□□ 1.3
CDK3-202ENST00000448471 ATP10AO60312 1499 aa23.12■■□□□ 1.29
CDK3-202ENST00000448471 ARHGEF12Q9NZN5 1544 aa23.12■■□□□ 1.29
CDK3-202ENST00000448471 C9orf84Q5VXU9 1444 aa23.11■■□□□ 1.29
CDK3-202ENST00000448471 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
CDK3-202ENST00000448471 EFCAB2Q5VUJ9 269 aa23.08■■□□□ 1.29
CDK3-202ENST00000448471 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
CDK3-202ENST00000448471 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
CDK3-202ENST00000448471 PREX1Q8TCU6 1659 aa23.06■■□□□ 1.28
CDK3-202ENST00000448471 FMN1Q68DA7 1419 aa23.05■■□□□ 1.28
CDK3-202ENST00000448471 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
CDK3-202ENST00000448471 ZNF518AQ6AHZ1 1483 aa23.03■■□□□ 1.28
CDK3-202ENST00000448471 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
CDK3-202ENST00000448471 KIF14Q15058 1648 aa23.02■■□□□ 1.28
CDK3-202ENST00000448471 ARHGAP5Q13017 1502 aa22.99■■□□□ 1.27
CDK3-202ENST00000448471 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
CDK3-202ENST00000448471 KDM5CP41229 1560 aa22.99■■□□□ 1.27
CDK3-202ENST00000448471 ARHGAP35Q9NRY4 1499 aa22.99■■□□□ 1.27
CDK3-202ENST00000448471 AFAP1Q8N556 730 aa22.98■■□□□ 1.27
CDK3-202ENST00000448471 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
CDK3-202ENST00000448471 UHRF1BP1Q6BDS2 1440 aa22.97■■□□□ 1.27
CDK3-202ENST00000448471 MYT1LQ9UL68 1186 aa22.97■■□□□ 1.27
CDK3-202ENST00000448471 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
CDK3-202ENST00000448471 CEP162Q5TB80 1403 aa22.95■■□□□ 1.27
CDK3-202ENST00000448471 DIP2CQ9Y2E4 1556 aa22.95■■□□□ 1.26
CDK3-202ENST00000448471 CLIP1P30622 1438 aa22.95■■□□□ 1.26
CDK3-202ENST00000448471 STRCQ7RTU9 1775 aa22.95■■□□□ 1.26
CDK3-202ENST00000448471 REREQ9P2R6 1566 aa22.92■■□□□ 1.26
CDK3-202ENST00000448471 ABCA6Q8N139 1617 aa22.9■■□□□ 1.26
CDK3-202ENST00000448471 MLH3Q9UHC1 1453 aa22.89■■□□□ 1.25
CDK3-202ENST00000448471 DISP3Q9P2K9 1392 aa22.87■■□□□ 1.25
CDK3-202ENST00000448471 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
CDK3-202ENST00000448471 CDC42BPBQ9Y5S2 1711 aa22.86■■□□□ 1.25
CDK3-202ENST00000448471 C3P01024 1663 aa22.86■■□□□ 1.25
CDK3-202ENST00000448471 PTPRTO14522 1441 aa22.85■■□□□ 1.25
CDK3-202ENST00000448471 ABCC1P33527 1531 aa22.85■■□□□ 1.25
CDK3-202ENST00000448471 AGLP35573 1532 aa22.85■■□□□ 1.25
CDK3-202ENST00000448471 ESF1Q9H501 851 aaKnown RBP22.84■■□□□ 1.25
CDK3-202ENST00000448471 TRAPPC8Q9Y2L5 1435 aa22.84■■□□□ 1.25
CDK3-202ENST00000448471 SETD1BQ9UPS6 1966 aaKnown RBP22.84■■□□□ 1.25
CDK3-202ENST00000448471 PREX2Q70Z35 1606 aa22.84■■□□□ 1.25
CDK3-202ENST00000448471 ILDR2Q71H61 639 aa22.81■■□□□ 1.24
CDK3-202ENST00000448471 ITSN2Q9NZM3 1697 aa22.81■■□□□ 1.24
CDK3-202ENST00000448471 CCDC18Q5T9S5 1454 aa22.78■■□□□ 1.24
CDK3-202ENST00000448471 CNTLNQ9NXG0 1405 aa22.77■■□□□ 1.24
CDK3-202ENST00000448471 KIDINS220Q9ULH0 1771 aa22.77■■□□□ 1.23
CDK3-202ENST00000448471 LTBP4Q8N2S1 1624 aa22.76■■□□□ 1.23
CDK3-202ENST00000448471 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
CDK3-202ENST00000448471 CASKIN1Q8WXD9 1431 aa22.75■■□□□ 1.23
CDK3-202ENST00000448471 SOCS7O14512 581 aa22.74■■□□□ 1.23
CDK3-202ENST00000448471 SPATA31D1Q6ZQQ2 1576 aa22.72■■□□□ 1.23
CDK3-202ENST00000448471 IQSEC2Q5JU85 1478 aa22.71■■□□□ 1.23
CDK3-202ENST00000448471 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
CDK3-202ENST00000448471 SAMD9LQ8IVG5 1584 aa22.71■■□□□ 1.23
CDK3-202ENST00000448471 NPATQ14207 1427 aa22.69■■□□□ 1.22
CDK3-202ENST00000448471 ZNF777Q9ULD5 760 aaPredicted RBP22.68■■□□□ 1.22
CDK3-202ENST00000448471 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
CDK3-202ENST00000448471 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
CDK3-202ENST00000448471 SYCP2Q9BX26 1530 aa22.67■■□□□ 1.22
CDK3-202ENST00000448471 ZMYM3Q14202 1370 aa22.66■■□□□ 1.22
CDK3-202ENST00000448471 SPAG9O60271 1321 aaKnown RBP22.64■■□□□ 1.22
CDK3-202ENST00000448471 FYCO1Q9BQS8 1478 aa22.64■■□□□ 1.21
CDK3-202ENST00000448471 TRIM26Q12899 539 aaPredicted RBP22.63■■□□□ 1.21
CDK3-202ENST00000448471 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
CDK3-202ENST00000448471 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
CDK3-202ENST00000448471 HNRNPMP52272 730 aaKnown RBP eCLIP22.62■■□□□ 1.21
CDK3-202ENST00000448471 NCKAP5LQ9HCH0 1330 aa22.61■■□□□ 1.21
CDK3-202ENST00000448471 ATP7AQ04656 1500 aa22.61■■□□□ 1.21
CDK3-202ENST00000448471 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
CDK3-202ENST00000448471 ZNF335Q9H4Z2 1342 aaPredicted RBP22.59■■□□□ 1.21
CDK3-202ENST00000448471 CLTCQ00610 1675 aaKnown RBP22.59■■□□□ 1.21
CDK3-202ENST00000448471 PLXNC1O60486 1568 aa22.58■■□□□ 1.21
CDK3-202ENST00000448471 INO80Q9ULG1 1556 aaPredicted RBP22.58■■□□□ 1.2
CDK3-202ENST00000448471 A2MP01023 1474 aa22.57■■□□□ 1.2
CDK3-202ENST00000448471 MYO3AQ8NEV4 1616 aa22.57■■□□□ 1.2
CDK3-202ENST00000448471 ZNF142P52746 1687 aaPredicted RBP22.57■■□□□ 1.2
CDK3-202ENST00000448471 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
CDK3-202ENST00000448471 PCGF6Q9BYE7 350 aa22.56■■□□□ 1.2
CDK3-202ENST00000448471 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
CDK3-202ENST00000448471 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
CDK3-202ENST00000448471 PTPRKQ15262 1439 aa22.55■■□□□ 1.2
CDK3-202ENST00000448471 PKD2Q13563 968 aa22.55■■□□□ 1.2
CDK3-202ENST00000448471 CFDP1Q9UEE9 299 aaPredicted RBP22.55■■□□□ 1.2
CDK3-202ENST00000448471 CEP170BQ9Y4F5 1589 aaPredicted RBP22.54■■□□□ 1.2
CDK3-202ENST00000448471 UBAP1LF5GYI3 381 aa22.54■■□□□ 1.2
CDK3-202ENST00000448471 GGT6Q6P531 493 aa22.54■■□□□ 1.2
CDK3-202ENST00000448471 CCNB3Q8WWL7 1395 aa22.53■■□□□ 1.2
CDK3-202ENST00000448471 TCOF1Q13428 1488 aaKnown RBP22.53■■□□□ 1.2
CDK3-202ENST00000448471 PPP6R1Q9UPN7 881 aa22.46■■□□□ 1.19
CDK3-202ENST00000448471 ADGBQ8N7X0 1667 aa22.46■■□□□ 1.19
CDK3-202ENST00000448471 MTUS2Q5JR59 1369 aa22.46■■□□□ 1.19
CDK3-202ENST00000448471 A2ML1A8K2U0 1454 aa22.43■■□□□ 1.18
CDK3-202ENST00000448471 ZNF644Q9H582 1327 aaPredicted RBP22.42■■□□□ 1.18
CDK3-202ENST00000448471 DNMT1P26358 1616 aaKnown RBP22.42■■□□□ 1.18
CDK3-202ENST00000448471 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
CDK3-202ENST00000448471 MBD5Q9P267 1494 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms