RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 TIAM1Q13009 1591 aa27.77■■■□□ 2.04
HLCS-205ENST00000448340 ARHGEF40Q8TER5 1519 aa27.76■■■□□ 2.03
HLCS-205ENST00000448340 FANCAO15360 1455 aa27.74■■■□□ 2.03
HLCS-205ENST00000448340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.73■■■□□ 2.03
HLCS-205ENST00000448340 APLP2Q06481 763 aa27.73■■■□□ 2.03
HLCS-205ENST00000448340 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
HLCS-205ENST00000448340 RICTORQ6R327 1708 aa27.72■■■□□ 2.03
HLCS-205ENST00000448340 KIF14Q15058 1648 aa27.71■■■□□ 2.03
HLCS-205ENST00000448340 EHBP1L1Q8N3D4 1523 aa27.68■■■□□ 2.02
HLCS-205ENST00000448340 ZMYM4Q5VZL5 1548 aa27.67■■■□□ 2.02
HLCS-205ENST00000448340 YEATS2Q9ULM3 1422 aa27.67■■■□□ 2.02
HLCS-205ENST00000448340 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
HLCS-205ENST00000448340 TTC37Q6PGP7 1564 aa27.65■■■□□ 2.02
HLCS-205ENST00000448340 RIMS1Q86UR5 1692 aaKnown RBP27.64■■■□□ 2.02
HLCS-205ENST00000448340 HSPA2P54652 639 aa27.63■■■□□ 2.01
HLCS-205ENST00000448340 MAGI2Q86UL8 1455 aa27.63■■■□□ 2.01
HLCS-205ENST00000448340 SIGLEC1Q9BZZ2 1709 aa27.62■■■□□ 2.01
HLCS-205ENST00000448340 CFAP74Q9C0B2 1584 aa27.62■■■□□ 2.01
HLCS-205ENST00000448340 POGZQ7Z3K3 1410 aa27.61■■■□□ 2.01
HLCS-205ENST00000448340 KANK4Q5T7N3 995 aaPredicted RBP27.61■■■□□ 2.01
HLCS-205ENST00000448340 ZFYVE16Q7Z3T8 1539 aa27.6■■■□□ 2.01
HLCS-205ENST00000448340 PLCH2O75038 1416 aa27.59■■■□□ 2.01
HLCS-205ENST00000448340 SUPT6HQ7KZ85 1726 aaKnown RBP27.56■■■□□ 2
HLCS-205ENST00000448340 SCAPERQ9BY12 1400 aa27.56■■■□□ 2
HLCS-205ENST00000448340 MYO5CQ9NQX4 1742 aa27.55■■■□□ 2
HLCS-205ENST00000448340 MLECQ14165 292 aa27.52■■■□□ 2
HLCS-205ENST00000448340 PLPPR3Q6T4P5 718 aa27.52■■■□□ 2
HLCS-205ENST00000448340 NCOA2Q15596 1464 aa27.51■■■□□ 2
HLCS-205ENST00000448340 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
HLCS-205ENST00000448340 GPATCH8Q9UKJ3 1502 aaKnown RBP27.49■■□□□ 1.99
HLCS-205ENST00000448340 CDC42BPAQ5VT25 1732 aa27.49■■□□□ 1.99
HLCS-205ENST00000448340 ATP10AO60312 1499 aa27.48■■□□□ 1.99
HLCS-205ENST00000448340 PREX2Q70Z35 1606 aa27.48■■□□□ 1.99
HLCS-205ENST00000448340 EFCAB2Q5VUJ9 269 aa27.47■■□□□ 1.99
HLCS-205ENST00000448340 CDC42BPBQ9Y5S2 1711 aa27.47■■□□□ 1.99
HLCS-205ENST00000448340 ARHGEF12Q9NZN5 1544 aa27.46■■□□□ 1.99
HLCS-205ENST00000448340 CERKQ8TCT0 537 aa27.45■■□□□ 1.98
HLCS-205ENST00000448340 ARHGAP5Q13017 1502 aa27.45■■□□□ 1.98
HLCS-205ENST00000448340 C9orf84Q5VXU9 1444 aa27.42■■□□□ 1.98
HLCS-205ENST00000448340 ITSN2Q9NZM3 1697 aa27.42■■□□□ 1.98
HLCS-205ENST00000448340 CFDP1Q9UEE9 299 aaPredicted RBP27.4■■□□□ 1.98
HLCS-205ENST00000448340 CEBPAP49715 358 aaPredicted RBP27.39■■□□□ 1.98
HLCS-205ENST00000448340 FER1L4A9Z1Z3 1794 aa27.39■■□□□ 1.98
HLCS-205ENST00000448340 AFAP1Q8N556 730 aa27.37■■□□□ 1.97
HLCS-205ENST00000448340 ZNF518AQ6AHZ1 1483 aa27.34■■□□□ 1.97
HLCS-205ENST00000448340 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.97
HLCS-205ENST00000448340 ZNF777Q9ULD5 760 aaPredicted RBP27.32■■□□□ 1.96
HLCS-205ENST00000448340 KDM5CP41229 1560 aa27.31■■□□□ 1.96
HLCS-205ENST00000448340 PPARGC1BQ86YN6 1023 aaKnown RBP27.31■■□□□ 1.96
HLCS-205ENST00000448340 MIA2Q96PC5 1412 aa27.3■■□□□ 1.96
HLCS-205ENST00000448340 SAMD9LQ8IVG5 1584 aa27.3■■□□□ 1.96
HLCS-205ENST00000448340 PLEKHH2Q8IVE3 1493 aa27.28■■□□□ 1.96
HLCS-205ENST00000448340 ABCC1P33527 1531 aa27.27■■□□□ 1.96
HLCS-205ENST00000448340 PREX1Q8TCU6 1659 aa27.27■■□□□ 1.96
HLCS-205ENST00000448340 KIAA1107Q9UPP5 1409 aa27.25■■□□□ 1.95
HLCS-205ENST00000448340 ZNF644Q9H582 1327 aaPredicted RBP27.24■■□□□ 1.95
HLCS-205ENST00000448340 MLH3Q9UHC1 1453 aa27.24■■□□□ 1.95
HLCS-205ENST00000448340 DIP2CQ9Y2E4 1556 aa27.23■■□□□ 1.95
HLCS-205ENST00000448340 DMRT2Q9Y5R5 561 aa27.23■■□□□ 1.95
HLCS-205ENST00000448340 REREQ9P2R6 1566 aa27.22■■□□□ 1.95
HLCS-205ENST00000448340 FGD6Q6ZV73 1430 aa27.22■■□□□ 1.95
HLCS-205ENST00000448340 STRCQ7RTU9 1775 aa27.22■■□□□ 1.95
HLCS-205ENST00000448340 CAMSAP2Q08AD1 1489 aa27.21■■□□□ 1.95
HLCS-205ENST00000448340 UHRF1BP1Q6BDS2 1440 aa27.21■■□□□ 1.95
HLCS-205ENST00000448340 SYCP2Q9BX26 1530 aa27.2■■□□□ 1.94
HLCS-205ENST00000448340 TRAPPC8Q9Y2L5 1435 aa27.19■■□□□ 1.94
HLCS-205ENST00000448340 HNRNPMP52272 730 aaKnown RBP eCLIP27.19■■□□□ 1.94
HLCS-205ENST00000448340 PTPN23Q9H3S7 1636 aa27.17■■□□□ 1.94
HLCS-205ENST00000448340 AGLP35573 1532 aa27.16■■□□□ 1.94
HLCS-205ENST00000448340 MBD5Q9P267 1494 aa27.16■■□□□ 1.94
HLCS-205ENST00000448340 SETD1BQ9UPS6 1966 aaKnown RBP27.16■■□□□ 1.94
HLCS-205ENST00000448340 MYT1LQ9UL68 1186 aa27.15■■□□□ 1.94
HLCS-205ENST00000448340 ABCA6Q8N139 1617 aa27.15■■□□□ 1.94
HLCS-205ENST00000448340 RSPH4AQ5TD94 716 aa27.14■■□□□ 1.94
HLCS-205ENST00000448340 PTPRTO14522 1441 aa27.14■■□□□ 1.93
HLCS-205ENST00000448340 TCOF1Q13428 1488 aaKnown RBP27.13■■□□□ 1.93
HLCS-205ENST00000448340 ARHGEF5Q12774 1597 aa27.1■■□□□ 1.93
HLCS-205ENST00000448340 C3P01024 1663 aa27.09■■□□□ 1.93
HLCS-205ENST00000448340 CCDC141Q6ZP82 1450 aa27.08■■□□□ 1.93
HLCS-205ENST00000448340 ILDR2Q71H61 639 aa27.06■■□□□ 1.92
HLCS-205ENST00000448340 SPAG9O60271 1321 aaKnown RBP27.05■■□□□ 1.92
HLCS-205ENST00000448340 FAM50AQ14320 339 aaKnown RBP27.04■■□□□ 1.92
HLCS-205ENST00000448340 KIDINS220Q9ULH0 1771 aa27.04■■□□□ 1.92
HLCS-205ENST00000448340 ESF1Q9H501 851 aaKnown RBP27.03■■□□□ 1.92
HLCS-205ENST00000448340 CNTLNQ9NXG0 1405 aa27.03■■□□□ 1.92
HLCS-205ENST00000448340 LTBP4Q8N2S1 1624 aa27.02■■□□□ 1.92
HLCS-205ENST00000448340 RRBP1Q9P2E9 1410 aaKnown RBP27.02■■□□□ 1.92
HLCS-205ENST00000448340 NCOA1Q15788 1441 aa27.01■■□□□ 1.91
HLCS-205ENST00000448340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.01■■□□□ 1.91
HLCS-205ENST00000448340 DISP3Q9P2K9 1392 aa27.01■■□□□ 1.91
HLCS-205ENST00000448340 TSPY4P0CV99 314 aa27.01■■□□□ 1.91
HLCS-205ENST00000448340 TSPY10P0CW01 314 aa27.01■■□□□ 1.91
HLCS-205ENST00000448340 DNMT1P26358 1616 aaKnown RBP26.99■■□□□ 1.91
HLCS-205ENST00000448340 RTEL1-TNFRSF6BF6WH68 1400 aa26.99■■□□□ 1.91
HLCS-205ENST00000448340 ABCC5O15440 1437 aa26.99■■□□□ 1.91
HLCS-205ENST00000448340 INO80Q9ULG1 1556 aaPredicted RBP26.98■■□□□ 1.91
HLCS-205ENST00000448340 ATP7AQ04656 1500 aa26.98■■□□□ 1.91
HLCS-205ENST00000448340 DAPK1P53355 1430 aa26.97■■□□□ 1.91
HLCS-205ENST00000448340 NPATQ14207 1427 aa26.97■■□□□ 1.91
HLCS-205ENST00000448340 ZMYM3Q14202 1370 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms