RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 PRKRIP1Q9H875 184 aaPredicted RBP22.62■■□□□ 1.21
PBX3-207ENST00000447726 ANKRD30BQ9BXX2 1392 aa22.62■■□□□ 1.21
PBX3-207ENST00000447726 NCOA1Q15788 1441 aa22.62■■□□□ 1.21
PBX3-207ENST00000447726 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
PBX3-207ENST00000447726 FAM9BQ8IZU0 186 aa22.6■■□□□ 1.21
PBX3-207ENST00000447726 DAPK1P53355 1430 aa22.59■■□□□ 1.21
PBX3-207ENST00000447726 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
PBX3-207ENST00000447726 RPRD2Q5VT52 1461 aaKnown RBP22.57■■□□□ 1.2
PBX3-207ENST00000447726 ABCC5O15440 1437 aa22.57■■□□□ 1.2
PBX3-207ENST00000447726 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
PBX3-207ENST00000447726 MRS2Q9HD23 443 aa22.56■■□□□ 1.2
PBX3-207ENST00000447726 ROCK1Q13464 1354 aa22.56■■□□□ 1.2
PBX3-207ENST00000447726 TEX14Q8IWB6 1497 aa22.55■■□□□ 1.2
PBX3-207ENST00000447726 KIF7Q2M1P5 1343 aa22.53■■□□□ 1.2
PBX3-207ENST00000447726 MSH5O43196 834 aa22.53■■□□□ 1.2
PBX3-207ENST00000447726 CDK11AQ9UQ88 783 aaPredicted RBP22.52■■□□□ 1.2
PBX3-207ENST00000447726 SPATA31E1Q6ZUB1 1445 aa22.51■■□□□ 1.19
PBX3-207ENST00000447726 NUP153P49790 1475 aaKnown RBP22.49■■□□□ 1.19
PBX3-207ENST00000447726 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
PBX3-207ENST00000447726 DISP1Q96F81 1524 aa22.48■■□□□ 1.19
PBX3-207ENST00000447726 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
PBX3-207ENST00000447726 PPP4R2Q9NY27 417 aa22.46■■□□□ 1.19
PBX3-207ENST00000447726 ZBED9Q6R2W3 1325 aa22.46■■□□□ 1.19
PBX3-207ENST00000447726 ERICH6BQ5W0A0 696 aa22.45■■□□□ 1.18
PBX3-207ENST00000447726 KIAA0556O60303 1618 aa22.43■■□□□ 1.18
PBX3-207ENST00000447726 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
PBX3-207ENST00000447726 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
PBX3-207ENST00000447726 KIAA0586Q9BVV6 1533 aa22.43■■□□□ 1.18
PBX3-207ENST00000447726 PZPP20742 1482 aa22.42■■□□□ 1.18
PBX3-207ENST00000447726 PRG4Q92954 1404 aaPredicted RBP22.41■■□□□ 1.18
PBX3-207ENST00000447726 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
PBX3-207ENST00000447726 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
PBX3-207ENST00000447726 CFDP1Q9UEE9 299 aaPredicted RBP22.4■■□□□ 1.18
PBX3-207ENST00000447726 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.18
PBX3-207ENST00000447726 ZNF777Q9ULD5 760 aaPredicted RBP22.38■■□□□ 1.17
PBX3-207ENST00000447726 POLR3GLQ9BT43 218 aa22.38■■□□□ 1.17
PBX3-207ENST00000447726 RAPGEF6Q8TEU7 1601 aa22.38■■□□□ 1.17
PBX3-207ENST00000447726 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
PBX3-207ENST00000447726 TROQ12816 1431 aaPredicted RBP22.34■■□□□ 1.17
PBX3-207ENST00000447726 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
PBX3-207ENST00000447726 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
PBX3-207ENST00000447726 PKD2Q13563 968 aa22.34■■□□□ 1.17
PBX3-207ENST00000447726 USP47Q96K76 1375 aa22.33■■□□□ 1.17
PBX3-207ENST00000447726 KIAA1107Q9UPP5 1409 aa22.32■■□□□ 1.16
PBX3-207ENST00000447726 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
PBX3-207ENST00000447726 MBD5Q9P267 1494 aa22.32■■□□□ 1.16
PBX3-207ENST00000447726 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
PBX3-207ENST00000447726 PLB1Q6P1J6 1458 aa22.31■■□□□ 1.16
PBX3-207ENST00000447726 POLR1AO95602 1720 aaPredicted RBP22.31■■□□□ 1.16
PBX3-207ENST00000447726 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
PBX3-207ENST00000447726 BCORL1Q5H9F3 1711 aa22.28■■□□□ 1.16
PBX3-207ENST00000447726 KIF14Q15058 1648 aa22.26■■□□□ 1.15
PBX3-207ENST00000447726 ADGRL2O95490 1459 aa22.24■■□□□ 1.15
PBX3-207ENST00000447726 ANKRD30AQ9BXX3 1397 aa22.24■■□□□ 1.15
PBX3-207ENST00000447726 SMG6Q86US8 1419 aaKnown RBP22.24■■□□□ 1.15
PBX3-207ENST00000447726 ERICH6Q7L0X2 663 aa22.23■■□□□ 1.15
PBX3-207ENST00000447726 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
PBX3-207ENST00000447726 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
PBX3-207ENST00000447726 ADGBQ8N7X0 1667 aa22.21■■□□□ 1.15
PBX3-207ENST00000447726 BCL11AQ9H165 835 aa22.21■■□□□ 1.15
PBX3-207ENST00000447726 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
PBX3-207ENST00000447726 FBLN2P98095 1184 aa22.21■■□□□ 1.15
PBX3-207ENST00000447726 ITSN2Q9NZM3 1697 aa22.2■■□□□ 1.14
PBX3-207ENST00000447726 EIF4G3O43432 1585 aaKnown RBP22.2■■□□□ 1.14
PBX3-207ENST00000447726 KDM5CP41229 1560 aa22.19■■□□□ 1.14
PBX3-207ENST00000447726 NUP155O75694 1391 aa22.19■■□□□ 1.14
PBX3-207ENST00000447726 PNISRQ8TF01 805 aaKnown RBP22.18■■□□□ 1.14
PBX3-207ENST00000447726 CARD11Q9BXL7 1154 aa22.18■■□□□ 1.14
PBX3-207ENST00000447726 ARID4BQ4LE39 1312 aaPredicted RBP22.17■■□□□ 1.14
PBX3-207ENST00000447726 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
PBX3-207ENST00000447726 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
PBX3-207ENST00000447726 CROCC2H7BZ55 1655 aa22.16■■□□□ 1.14
PBX3-207ENST00000447726 TMC1Q8TDI8 760 aa22.16■■□□□ 1.14
PBX3-207ENST00000447726 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
PBX3-207ENST00000447726 RNF123Q5XPI4 1314 aa22.15■■□□□ 1.14
PBX3-207ENST00000447726 UHRF1BP1Q6BDS2 1440 aa22.15■■□□□ 1.14
PBX3-207ENST00000447726 ADCY10Q96PN6 1610 aa22.14■■□□□ 1.14
PBX3-207ENST00000447726 RALGAPBQ86X10 1494 aa22.13■■□□□ 1.13
PBX3-207ENST00000447726 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
PBX3-207ENST00000447726 PLEKHD1A6NEE1 506 aa22.13■■□□□ 1.13
PBX3-207ENST00000447726 C9orf84Q5VXU9 1444 aa22.12■■□□□ 1.13
PBX3-207ENST00000447726 ROCK2O75116 1388 aaKnown RBP22.11■■□□□ 1.13
PBX3-207ENST00000447726 CARMIL2Q6F5E8 1435 aa22.1■■□□□ 1.13
PBX3-207ENST00000447726 DCAF11Q8TEB1 546 aa22.1■■□□□ 1.13
PBX3-207ENST00000447726 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
PBX3-207ENST00000447726 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
PBX3-207ENST00000447726 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
PBX3-207ENST00000447726 TSPY4P0CV99 314 aa22.08■■□□□ 1.13
PBX3-207ENST00000447726 TSPY10P0CW01 314 aa22.08■■□□□ 1.13
PBX3-207ENST00000447726 HNRNPMP52272 730 aaKnown RBP eCLIP22.08■■□□□ 1.12
PBX3-207ENST00000447726 KIF15Q9NS87 1388 aa22.07■■□□□ 1.12
PBX3-207ENST00000447726 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
PBX3-207ENST00000447726 ATP10BO94823 1461 aa22.05■■□□□ 1.12
PBX3-207ENST00000447726 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
PBX3-207ENST00000447726 ARHGEF12Q9NZN5 1544 aa22.05■■□□□ 1.12
PBX3-207ENST00000447726 SHANK2Q9UPX8 1470 aa22.04■■□□□ 1.12
PBX3-207ENST00000447726 LRPPRCP42704 1394 aaKnown RBP22.03■■□□□ 1.12
PBX3-207ENST00000447726 NUP160Q12769 1436 aa22.02■■□□□ 1.12
PBX3-207ENST00000447726 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
PBX3-207ENST00000447726 BRD4O60885 1362 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms