RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 HAX1O00165 279 aa11.29□□□□□ -0.6
TRIM4-204ENST00000447480 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
TRIM4-204ENST00000447480 NEUROD1Q13562 356 aa11.28□□□□□ -0.6
TRIM4-204ENST00000447480 CCER1Q8TC90 406 aaPredicted RBP11.28□□□□□ -0.6
TRIM4-204ENST00000447480 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
TRIM4-204ENST00000447480 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
TRIM4-204ENST00000447480 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
TRIM4-204ENST00000447480 CLIP1P30622 1438 aa11.26□□□□□ -0.61
TRIM4-204ENST00000447480 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
TRIM4-204ENST00000447480 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
TRIM4-204ENST00000447480 PTPRGP23470 1445 aa11.25□□□□□ -0.61
TRIM4-204ENST00000447480 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
TRIM4-204ENST00000447480 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
TRIM4-204ENST00000447480 CEP162Q5TB80 1403 aa11.24□□□□□ -0.61
TRIM4-204ENST00000447480 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
TRIM4-204ENST00000447480 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
TRIM4-204ENST00000447480 C19orf67A6NJJ6 358 aa11.21□□□□□ -0.61
TRIM4-204ENST00000447480 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRIM4-204ENST00000447480 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
TRIM4-204ENST00000447480 EVX2Q03828 476 aa11.2□□□□□ -0.62
TRIM4-204ENST00000447480 HECW1Q76N89 1606 aa11.2□□□□□ -0.62
TRIM4-204ENST00000447480 UHRF1BP1LA0JNW5 1464 aa11.19□□□□□ -0.62
TRIM4-204ENST00000447480 ARHGAP35Q9NRY4 1499 aa11.19□□□□□ -0.62
TRIM4-204ENST00000447480 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
TRIM4-204ENST00000447480 RAPGEF6Q8TEU7 1601 aa11.18□□□□□ -0.62
TRIM4-204ENST00000447480 RANGAP1P46060 587 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-204ENST00000447480 CDK11AQ9UQ88 783 aaPredicted RBP11.17□□□□□ -0.62
TRIM4-204ENST00000447480 ABCC2Q92887 1545 aa11.17□□□□□ -0.62
TRIM4-204ENST00000447480 CCDC18Q5T9S5 1454 aa11.17□□□□□ -0.62
TRIM4-204ENST00000447480 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
TRIM4-204ENST00000447480 FYCO1Q9BQS8 1478 aa11.17□□□□□ -0.62
TRIM4-204ENST00000447480 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
TRIM4-204ENST00000447480 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
TRIM4-204ENST00000447480 ABCA8O94911 1581 aa11.15□□□□□ -0.62
TRIM4-204ENST00000447480 ERCC6L2Q5T890 1561 aa11.15□□□□□ -0.62
TRIM4-204ENST00000447480 CYB5RLQ6IPT4 315 aa11.14□□□□□ -0.63
TRIM4-204ENST00000447480 VPS8Q8N3P4 1428 aa11.14□□□□□ -0.63
TRIM4-204ENST00000447480 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
TRIM4-204ENST00000447480 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
TRIM4-204ENST00000447480 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
TRIM4-204ENST00000447480 KDM5BQ9UGL1 1544 aa11.1□□□□□ -0.63
TRIM4-204ENST00000447480 SP7Q8TDD2 431 aaPredicted RBP11.1□□□□□ -0.63
TRIM4-204ENST00000447480 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
TRIM4-204ENST00000447480 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
TRIM4-204ENST00000447480 PLB1Q6P1J6 1458 aa11.09□□□□□ -0.63
TRIM4-204ENST00000447480 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
TRIM4-204ENST00000447480 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.64
TRIM4-204ENST00000447480 ZCCHC11Q5TAX3 1644 aaKnown RBP11.07□□□□□ -0.64
TRIM4-204ENST00000447480 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
TRIM4-204ENST00000447480 ZRANB1Q9UGI0 708 aa11.07□□□□□ -0.64
TRIM4-204ENST00000447480 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
TRIM4-204ENST00000447480 EPRSP07814 1512 aaKnown RBP11.06□□□□□ -0.64
TRIM4-204ENST00000447480 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
TRIM4-204ENST00000447480 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
TRIM4-204ENST00000447480 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
TRIM4-204ENST00000447480 RASEFQ8IZ41 740 aa11.05□□□□□ -0.64
TRIM4-204ENST00000447480 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
TRIM4-204ENST00000447480 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
TRIM4-204ENST00000447480 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
TRIM4-204ENST00000447480 WDR7Q9Y4E6 1490 aa11.02□□□□□ -0.65
TRIM4-204ENST00000447480 NUBP1P53384 320 aa11.02□□□□□ -0.65
TRIM4-204ENST00000447480 EHBP1L1Q8N3D4 1523 aa11.02□□□□□ -0.65
TRIM4-204ENST00000447480 ATP10BO94823 1461 aa11.01□□□□□ -0.65
TRIM4-204ENST00000447480 TIAM1Q13009 1591 aa11.01□□□□□ -0.65
TRIM4-204ENST00000447480 KIF14Q15058 1648 aa11.01□□□□□ -0.65
TRIM4-204ENST00000447480 MTUS2Q5JR59 1369 aa11.01□□□□□ -0.65
TRIM4-204ENST00000447480 ASXL2Q76L83 1435 aa11□□□□□ -0.65
TRIM4-204ENST00000447480 SUPT6HQ7KZ85 1726 aaKnown RBP10.99□□□□□ -0.65
TRIM4-204ENST00000447480 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
TRIM4-204ENST00000447480 GLI2P10070 1586 aa10.99□□□□□ -0.65
TRIM4-204ENST00000447480 ZNF579Q8NAF0 562 aaKnown RBP10.98□□□□□ -0.65
TRIM4-204ENST00000447480 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
TRIM4-204ENST00000447480 CFAP74Q9C0B2 1584 aa10.97□□□□□ -0.65
TRIM4-204ENST00000447480 LRRIQ1Q96JM4 1722 aa10.96□□□□□ -0.65
TRIM4-204ENST00000447480 ITSN2Q9NZM3 1697 aa10.96□□□□□ -0.65
TRIM4-204ENST00000447480 CDK13Q14004 1512 aaKnown RBP10.96□□□□□ -0.65
TRIM4-204ENST00000447480 ABCC10Q5T3U5 1492 aa10.96□□□□□ -0.65
TRIM4-204ENST00000447480 TEX14Q8IWB6 1497 aa10.96□□□□□ -0.65
TRIM4-204ENST00000447480 PHLDB1Q86UU1 1377 aa10.95□□□□□ -0.66
TRIM4-204ENST00000447480 GABBR2O75899 941 aa10.95□□□□□ -0.66
TRIM4-204ENST00000447480 ABCA9Q8IUA7 1624 aa10.95□□□□□ -0.66
TRIM4-204ENST00000447480 ARAP3Q8WWN8 1544 aa10.94□□□□□ -0.66
TRIM4-204ENST00000447480 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
TRIM4-204ENST00000447480 SPOCK2Q92563 424 aa10.94□□□□□ -0.66
TRIM4-204ENST00000447480 MYO5CQ9NQX4 1742 aa10.94□□□□□ -0.66
TRIM4-204ENST00000447480 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
TRIM4-204ENST00000447480 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
TRIM4-204ENST00000447480 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
TRIM4-204ENST00000447480 MAP3K4Q9Y6R4 1608 aa10.91□□□□□ -0.66
TRIM4-204ENST00000447480 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
TRIM4-204ENST00000447480 CCNB3Q8WWL7 1395 aa10.9□□□□□ -0.66
TRIM4-204ENST00000447480 ARID3CA6NKF2 412 aa10.9□□□□□ -0.66
TRIM4-204ENST00000447480 FAM69CQ0P6D2 419 aa10.9□□□□□ -0.66
TRIM4-204ENST00000447480 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.66
TRIM4-204ENST00000447480 PLEKHH2Q8IVE3 1493 aa10.89□□□□□ -0.67
TRIM4-204ENST00000447480 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
TRIM4-204ENST00000447480 CD109Q6YHK3 1445 aa10.89□□□□□ -0.67
TRIM4-204ENST00000447480 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
TRIM4-204ENST00000447480 PREX2Q70Z35 1606 aa10.87□□□□□ -0.67
TRIM4-204ENST00000447480 NEO1Q92859 1461 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms