RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
ATRN-202ENST00000446916 CCDC18Q5T9S5 1454 aa19.68■□□□□ 0.74
ATRN-202ENST00000446916 ARID4BQ4LE39 1312 aaPredicted RBP19.67■□□□□ 0.74
ATRN-202ENST00000446916 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
ATRN-202ENST00000446916 LRRC9Q6ZRR7 1453 aa19.66■□□□□ 0.74
ATRN-202ENST00000446916 MPHOSPH9Q99550 1183 aa19.66■□□□□ 0.74
ATRN-202ENST00000446916 EIF4G2P78344 907 aaKnown RBP eCLIP19.63■□□□□ 0.73
ATRN-202ENST00000446916 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
ATRN-202ENST00000446916 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
ATRN-202ENST00000446916 NUP155O75694 1391 aa19.61■□□□□ 0.73
ATRN-202ENST00000446916 PAK3O75914 559 aaPredicted RBP19.6■□□□□ 0.73
ATRN-202ENST00000446916 DCAF11Q8TEB1 546 aa19.6■□□□□ 0.73
ATRN-202ENST00000446916 DHX57Q6P158 1386 aaKnown RBP19.59■□□□□ 0.73
ATRN-202ENST00000446916 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
ATRN-202ENST00000446916 KIF3BO15066 747 aa19.57■□□□□ 0.72
ATRN-202ENST00000446916 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
ATRN-202ENST00000446916 NCOA2Q15596 1464 aa19.55■□□□□ 0.72
ATRN-202ENST00000446916 CARD11Q9BXL7 1154 aa19.54■□□□□ 0.72
ATRN-202ENST00000446916 NEFMP07197 916 aa19.54■□□□□ 0.72
ATRN-202ENST00000446916 ANKRD30AQ9BXX3 1397 aa19.54■□□□□ 0.72
ATRN-202ENST00000446916 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
ATRN-202ENST00000446916 SPAG9O60271 1321 aaKnown RBP19.53■□□□□ 0.72
ATRN-202ENST00000446916 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
ATRN-202ENST00000446916 MYOM3Q5VTT5 1437 aa19.52■□□□□ 0.72
ATRN-202ENST00000446916 KIAA0586Q9BVV6 1533 aa19.52■□□□□ 0.72
ATRN-202ENST00000446916 PLB1Q6P1J6 1458 aa19.51■□□□□ 0.71
ATRN-202ENST00000446916 FYCO1Q9BQS8 1478 aa19.5■□□□□ 0.71
ATRN-202ENST00000446916 L3MBTL2Q969R5 705 aa19.5■□□□□ 0.71
ATRN-202ENST00000446916 SYNJ2O15056 1496 aa19.48■□□□□ 0.71
ATRN-202ENST00000446916 AFAP1Q8N556 730 aa19.48■□□□□ 0.71
ATRN-202ENST00000446916 IQGAP2Q13576 1575 aa19.47■□□□□ 0.71
ATRN-202ENST00000446916 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
ATRN-202ENST00000446916 PCF11O94913 1555 aaKnown RBP19.45■□□□□ 0.7
ATRN-202ENST00000446916 PPP1R15AO75807 674 aaPredicted RBP19.44■□□□□ 0.7
ATRN-202ENST00000446916 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
ATRN-202ENST00000446916 NUTM2DQ5VT03 806 aaPredicted RBP19.43■□□□□ 0.7
ATRN-202ENST00000446916 CUL7Q14999 1698 aa19.43■□□□□ 0.7
ATRN-202ENST00000446916 MRS2Q9HD23 443 aa19.42■□□□□ 0.7
ATRN-202ENST00000446916 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
ATRN-202ENST00000446916 HSPA5P11021 654 aaKnown RBP19.4■□□□□ 0.7
ATRN-202ENST00000446916 FAM69CQ0P6D2 419 aa19.4■□□□□ 0.7
ATRN-202ENST00000446916 FANCIQ9NVI1 1328 aa19.4■□□□□ 0.7
ATRN-202ENST00000446916 TMC1Q8TDI8 760 aa19.4■□□□□ 0.7
ATRN-202ENST00000446916 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.7
ATRN-202ENST00000446916 EPRSP07814 1512 aaKnown RBP19.39■□□□□ 0.69
ATRN-202ENST00000446916 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
ATRN-202ENST00000446916 SAFB2Q14151 953 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATRN-202ENST00000446916 PPP4R2Q9NY27 417 aa19.37■□□□□ 0.69
ATRN-202ENST00000446916 BRPF3Q9ULD4 1205 aa19.36■□□□□ 0.69
ATRN-202ENST00000446916 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
ATRN-202ENST00000446916 KANK1Q14678 1352 aa19.34■□□□□ 0.69
ATRN-202ENST00000446916 TROQ12816 1431 aaPredicted RBP19.33■□□□□ 0.68
ATRN-202ENST00000446916 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
ATRN-202ENST00000446916 WASHC2CQ9Y4E1 1318 aa19.31■□□□□ 0.68
ATRN-202ENST00000446916 STK26Q9P289 416 aa19.29■□□□□ 0.68
ATRN-202ENST00000446916 UACAQ9BZF9 1416 aa19.28■□□□□ 0.68
ATRN-202ENST00000446916 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
ATRN-202ENST00000446916 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
ATRN-202ENST00000446916 RAPGEF3O95398 923 aa19.26■□□□□ 0.67
ATRN-202ENST00000446916 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
ATRN-202ENST00000446916 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
ATRN-202ENST00000446916 HECW1Q76N89 1606 aa19.25■□□□□ 0.67
ATRN-202ENST00000446916 EIF4G3O43432 1585 aaKnown RBP19.25■□□□□ 0.67
ATRN-202ENST00000446916 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
ATRN-202ENST00000446916 TNNT2P45379 298 aaPredicted RBP19.24■□□□□ 0.67
ATRN-202ENST00000446916 EHBP1L1Q8N3D4 1523 aa19.23■□□□□ 0.67
ATRN-202ENST00000446916 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
ATRN-202ENST00000446916 SLC24A1O60721 1099 aa19.23■□□□□ 0.67
ATRN-202ENST00000446916 WDR62O43379 1518 aa19.21■□□□□ 0.67
ATRN-202ENST00000446916 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
ATRN-202ENST00000446916 ERICH6BQ5W0A0 696 aa19.2■□□□□ 0.66
ATRN-202ENST00000446916 PKNOX2Q96KN3 472 aa19.2■□□□□ 0.66
ATRN-202ENST00000446916 POGKQ9P215 609 aa19.19■□□□□ 0.66
ATRN-202ENST00000446916 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
ATRN-202ENST00000446916 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
ATRN-202ENST00000446916 ROCK2O75116 1388 aaKnown RBP19.18■□□□□ 0.66
ATRN-202ENST00000446916 GLIPR1L2Q4G1C9 344 aa19.16■□□□□ 0.66
ATRN-202ENST00000446916 SCAPERQ9BY12 1400 aa19.16■□□□□ 0.66
ATRN-202ENST00000446916 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
ATRN-202ENST00000446916 NAP1L5Q96NT1 182 aaPredicted RBP19.15■□□□□ 0.66
ATRN-202ENST00000446916 CCDC144AA2RUR9 1427 aa19.15■□□□□ 0.66
ATRN-202ENST00000446916 C14orf37Q86TY3 774 aa19.14■□□□□ 0.66
ATRN-202ENST00000446916 KNSTRNQ9Y448 316 aa19.14■□□□□ 0.66
ATRN-202ENST00000446916 C9orf84Q5VXU9 1444 aa19.14■□□□□ 0.65
ATRN-202ENST00000446916 NAIPQ13075 1403 aa19.13■□□□□ 0.65
ATRN-202ENST00000446916 SUPT6HQ7KZ85 1726 aaKnown RBP19.13■□□□□ 0.65
ATRN-202ENST00000446916 MIA2Q96PC5 1412 aa19.13■□□□□ 0.65
ATRN-202ENST00000446916 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
ATRN-202ENST00000446916 DAPK1P53355 1430 aa19.13■□□□□ 0.65
ATRN-202ENST00000446916 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
ATRN-202ENST00000446916 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
ATRN-202ENST00000446916 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
ATRN-202ENST00000446916 UBE2Q2Q8WVN8 375 aa19.11■□□□□ 0.65
ATRN-202ENST00000446916 HFM1A2PYH4 1435 aa19.11■□□□□ 0.65
ATRN-202ENST00000446916 WDR43Q15061 677 aaKnown RBP eCLIP19.1■□□□□ 0.65
ATRN-202ENST00000446916 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
ATRN-202ENST00000446916 TMF1P82094 1093 aa19.1■□□□□ 0.65
ATRN-202ENST00000446916 ATP10BO94823 1461 aa19.09■□□□□ 0.65
ATRN-202ENST00000446916 PTPRKQ15262 1439 aa19.09■□□□□ 0.65
ATRN-202ENST00000446916 CANXP27824 592 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms