RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 FHOD3Q2V2M9 1422 aa13.59□□□□□ -0.23
LINC00578-204ENST00000446548 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
LINC00578-204ENST00000446548 CEP170Q5SW79 1584 aa13.58□□□□□ -0.23
LINC00578-204ENST00000446548 NUBP1P53384 320 aa13.58□□□□□ -0.24
LINC00578-204ENST00000446548 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
LINC00578-204ENST00000446548 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
LINC00578-204ENST00000446548 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
LINC00578-204ENST00000446548 UGGT2Q9NYU1 1516 aa13.57□□□□□ -0.24
LINC00578-204ENST00000446548 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
LINC00578-204ENST00000446548 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
LINC00578-204ENST00000446548 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
LINC00578-204ENST00000446548 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
LINC00578-204ENST00000446548 CHD1O14646 1710 aa13.54□□□□□ -0.24
LINC00578-204ENST00000446548 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
LINC00578-204ENST00000446548 FYCO1Q9BQS8 1478 aa13.54□□□□□ -0.24
LINC00578-204ENST00000446548 CLCN6P51797 869 aa13.53□□□□□ -0.24
LINC00578-204ENST00000446548 NUP160Q12769 1436 aa13.53□□□□□ -0.24
LINC00578-204ENST00000446548 P3H3Q8IVL6 736 aa13.52□□□□□ -0.25
LINC00578-204ENST00000446548 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.25
LINC00578-204ENST00000446548 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.25
LINC00578-204ENST00000446548 KIAA0556O60303 1618 aa13.51□□□□□ -0.25
LINC00578-204ENST00000446548 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
LINC00578-204ENST00000446548 DISP1Q96F81 1524 aa13.49□□□□□ -0.25
LINC00578-204ENST00000446548 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
LINC00578-204ENST00000446548 GSE1Q14687 1217 aa13.48□□□□□ -0.25
LINC00578-204ENST00000446548 KANK4Q5T7N3 995 aaPredicted RBP13.48□□□□□ -0.25
LINC00578-204ENST00000446548 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
LINC00578-204ENST00000446548 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.25
LINC00578-204ENST00000446548 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
LINC00578-204ENST00000446548 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
LINC00578-204ENST00000446548 HECW1Q76N89 1606 aa13.43□□□□□ -0.26
LINC00578-204ENST00000446548 GABBR2O75899 941 aa13.43□□□□□ -0.26
LINC00578-204ENST00000446548 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
LINC00578-204ENST00000446548 HRCP23327 699 aa13.4□□□□□ -0.26
LINC00578-204ENST00000446548 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
LINC00578-204ENST00000446548 RAPGEF6Q8TEU7 1601 aa13.39□□□□□ -0.27
LINC00578-204ENST00000446548 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
LINC00578-204ENST00000446548 CCDC18Q5T9S5 1454 aa13.37□□□□□ -0.27
LINC00578-204ENST00000446548 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
LINC00578-204ENST00000446548 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
LINC00578-204ENST00000446548 EHBP1L1Q8N3D4 1523 aa13.35□□□□□ -0.27
LINC00578-204ENST00000446548 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
LINC00578-204ENST00000446548 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
LINC00578-204ENST00000446548 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
LINC00578-204ENST00000446548 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.27
LINC00578-204ENST00000446548 JPH4Q96JJ6 628 aa13.33□□□□□ -0.28
LINC00578-204ENST00000446548 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
LINC00578-204ENST00000446548 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
LINC00578-204ENST00000446548 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
LINC00578-204ENST00000446548 NUP153P49790 1475 aaKnown RBP13.32□□□□□ -0.28
LINC00578-204ENST00000446548 ARHGEF11O15085 1522 aa13.31□□□□□ -0.28
LINC00578-204ENST00000446548 MAP3K13O43283 966 aa13.31□□□□□ -0.28
LINC00578-204ENST00000446548 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
LINC00578-204ENST00000446548 PYGBP11216 843 aa13.31□□□□□ -0.28
LINC00578-204ENST00000446548 ABCA8O94911 1581 aa13.31□□□□□ -0.28
LINC00578-204ENST00000446548 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
LINC00578-204ENST00000446548 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
LINC00578-204ENST00000446548 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
LINC00578-204ENST00000446548 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
LINC00578-204ENST00000446548 PRG4Q92954 1404 aaPredicted RBP13.29□□□□□ -0.28
LINC00578-204ENST00000446548 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
LINC00578-204ENST00000446548 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
LINC00578-204ENST00000446548 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
LINC00578-204ENST00000446548 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
LINC00578-204ENST00000446548 NCOA2Q15596 1464 aa13.27□□□□□ -0.29
LINC00578-204ENST00000446548 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
LINC00578-204ENST00000446548 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
LINC00578-204ENST00000446548 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
LINC00578-204ENST00000446548 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
LINC00578-204ENST00000446548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00578-204ENST00000446548 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.3
LINC00578-204ENST00000446548 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
LINC00578-204ENST00000446548 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
LINC00578-204ENST00000446548 KIF14Q15058 1648 aa13.18□□□□□ -0.3
LINC00578-204ENST00000446548 PTPRGP23470 1445 aa13.18□□□□□ -0.3
LINC00578-204ENST00000446548 ATP10BO94823 1461 aa13.17□□□□□ -0.3
LINC00578-204ENST00000446548 TCOF1Q13428 1488 aaKnown RBP13.17□□□□□ -0.3
LINC00578-204ENST00000446548 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
LINC00578-204ENST00000446548 ARID3CA6NKF2 412 aa13.17□□□□□ -0.3
LINC00578-204ENST00000446548 ABCC2Q92887 1545 aa13.15□□□□□ -0.3
LINC00578-204ENST00000446548 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
LINC00578-204ENST00000446548 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.31
LINC00578-204ENST00000446548 UACAQ9BZF9 1416 aa13.14□□□□□ -0.31
LINC00578-204ENST00000446548 TIE1P35590 1138 aa13.14□□□□□ -0.31
LINC00578-204ENST00000446548 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
LINC00578-204ENST00000446548 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
LINC00578-204ENST00000446548 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
LINC00578-204ENST00000446548 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
LINC00578-204ENST00000446548 FAM50AQ14320 339 aaKnown RBP13.12□□□□□ -0.31
LINC00578-204ENST00000446548 MIA2Q96PC5 1412 aa13.12□□□□□ -0.31
LINC00578-204ENST00000446548 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
LINC00578-204ENST00000446548 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
LINC00578-204ENST00000446548 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
LINC00578-204ENST00000446548 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
LINC00578-204ENST00000446548 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
LINC00578-204ENST00000446548 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
LINC00578-204ENST00000446548 ITGAEP38570 1179 aa13.09□□□□□ -0.31
LINC00578-204ENST00000446548 PKD2Q13563 968 aa13.09□□□□□ -0.31
LINC00578-204ENST00000446548 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
LINC00578-204ENST00000446548 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms