RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ABCA9Q8IUA7 1624 aa11.58□□□□□ -0.56
SF3A3P1-201ENST00000446317 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
SF3A3P1-201ENST00000446317 HNRNPMP52272 730 aaKnown RBP eCLIP11.57□□□□□ -0.56
SF3A3P1-201ENST00000446317 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
SF3A3P1-201ENST00000446317 CDC42BPBQ9Y5S2 1711 aa11.56□□□□□ -0.56
SF3A3P1-201ENST00000446317 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
SF3A3P1-201ENST00000446317 PREX2Q70Z35 1606 aa11.56□□□□□ -0.56
SF3A3P1-201ENST00000446317 MAP3K4Q9Y6R4 1608 aa11.56□□□□□ -0.56
SF3A3P1-201ENST00000446317 CHIC2Q9UKJ5 165 aa11.55□□□□□ -0.56
SF3A3P1-201ENST00000446317 PLCH2O75038 1416 aa11.55□□□□□ -0.56
SF3A3P1-201ENST00000446317 FANCAO15360 1455 aa11.54□□□□□ -0.56
SF3A3P1-201ENST00000446317 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
SF3A3P1-201ENST00000446317 PTPN23Q9H3S7 1636 aa11.54□□□□□ -0.56
SF3A3P1-201ENST00000446317 GLI2P10070 1586 aa11.54□□□□□ -0.56
SF3A3P1-201ENST00000446317 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
SF3A3P1-201ENST00000446317 ITSN2Q9NZM3 1697 aa11.53□□□□□ -0.56
SF3A3P1-201ENST00000446317 EFCAB2Q5VUJ9 269 aa11.53□□□□□ -0.56
SF3A3P1-201ENST00000446317 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
SF3A3P1-201ENST00000446317 PCGF6Q9BYE7 350 aa11.53□□□□□ -0.56
SF3A3P1-201ENST00000446317 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
SF3A3P1-201ENST00000446317 PPRC1Q5VV67 1664 aaKnown RBP11.53□□□□□ -0.56
SF3A3P1-201ENST00000446317 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.57
SF3A3P1-201ENST00000446317 RAPGEF3O95398 923 aa11.51□□□□□ -0.57
SF3A3P1-201ENST00000446317 ARHGEF12Q9NZN5 1544 aa11.51□□□□□ -0.57
SF3A3P1-201ENST00000446317 AKNAQ7Z591 1439 aa11.51□□□□□ -0.57
SF3A3P1-201ENST00000446317 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
SF3A3P1-201ENST00000446317 SCAPERQ9BY12 1400 aa11.5□□□□□ -0.57
SF3A3P1-201ENST00000446317 ADGRL1O94910 1474 aa11.5□□□□□ -0.57
SF3A3P1-201ENST00000446317 TRAPPC8Q9Y2L5 1435 aa11.49□□□□□ -0.57
SF3A3P1-201ENST00000446317 RRBP1Q9P2E9 1410 aaKnown RBP11.49□□□□□ -0.57
SF3A3P1-201ENST00000446317 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
SF3A3P1-201ENST00000446317 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
SF3A3P1-201ENST00000446317 RRP7BPQ9NSQ0 103 aa11.47□□□□□ -0.57
SF3A3P1-201ENST00000446317 MIA2Q96PC5 1412 aa11.47□□□□□ -0.57
SF3A3P1-201ENST00000446317 COL17A1Q9UMD9 1497 aaPredicted RBP11.47□□□□□ -0.57
SF3A3P1-201ENST00000446317 ABCC1P33527 1531 aa11.47□□□□□ -0.57
SF3A3P1-201ENST00000446317 TCOF1Q13428 1488 aaKnown RBP11.46□□□□□ -0.57
SF3A3P1-201ENST00000446317 ABCC5O15440 1437 aa11.45□□□□□ -0.58
SF3A3P1-201ENST00000446317 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
SF3A3P1-201ENST00000446317 DAPK1P53355 1430 aa11.45□□□□□ -0.58
SF3A3P1-201ENST00000446317 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
SF3A3P1-201ENST00000446317 CFAP74Q9C0B2 1584 aa11.43□□□□□ -0.58
SF3A3P1-201ENST00000446317 NEO1Q92859 1461 aa11.43□□□□□ -0.58
SF3A3P1-201ENST00000446317 ARAP3Q8WWN8 1544 aa11.43□□□□□ -0.58
SF3A3P1-201ENST00000446317 DENND4BO75064 1496 aaPredicted RBP11.42□□□□□ -0.58
SF3A3P1-201ENST00000446317 SPAG9O60271 1321 aaKnown RBP11.42□□□□□ -0.58
SF3A3P1-201ENST00000446317 CCDC141Q6ZP82 1450 aa11.42□□□□□ -0.58
SF3A3P1-201ENST00000446317 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
SF3A3P1-201ENST00000446317 FRMPD1Q5SYB0 1578 aa11.41□□□□□ -0.58
SF3A3P1-201ENST00000446317 C9orf84Q5VXU9 1444 aa11.41□□□□□ -0.58
SF3A3P1-201ENST00000446317 DNMT1P26358 1616 aaKnown RBP11.41□□□□□ -0.58
SF3A3P1-201ENST00000446317 PLEKHH2Q8IVE3 1493 aa11.4□□□□□ -0.58
SF3A3P1-201ENST00000446317 TSPY4P0CV99 314 aa11.4□□□□□ -0.58
SF3A3P1-201ENST00000446317 TSPY10P0CW01 314 aa11.4□□□□□ -0.58
SF3A3P1-201ENST00000446317 KDM6BO15054 1643 aa11.4□□□□□ -0.58
SF3A3P1-201ENST00000446317 YEATS2Q9ULM3 1422 aa11.39□□□□□ -0.59
SF3A3P1-201ENST00000446317 KIAA1107Q9UPP5 1409 aa11.38□□□□□ -0.59
SF3A3P1-201ENST00000446317 CROCC2H7BZ55 1655 aa11.38□□□□□ -0.59
SF3A3P1-201ENST00000446317 RICTORQ6R327 1708 aa11.38□□□□□ -0.59
SF3A3P1-201ENST00000446317 ARHGEF5Q12774 1597 aa11.38□□□□□ -0.59
SF3A3P1-201ENST00000446317 ZNF518AQ6AHZ1 1483 aa11.37□□□□□ -0.59
SF3A3P1-201ENST00000446317 ZFYVE16Q7Z3T8 1539 aa11.36□□□□□ -0.59
SF3A3P1-201ENST00000446317 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
SF3A3P1-201ENST00000446317 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
SF3A3P1-201ENST00000446317 MLECQ14165 292 aa11.35□□□□□ -0.59
SF3A3P1-201ENST00000446317 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
SF3A3P1-201ENST00000446317 HECW2Q9P2P5 1572 aa11.34□□□□□ -0.59
SF3A3P1-201ENST00000446317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.34□□□□□ -0.59
SF3A3P1-201ENST00000446317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
SF3A3P1-201ENST00000446317 INO80Q9ULG1 1556 aaPredicted RBP11.34□□□□□ -0.59
SF3A3P1-201ENST00000446317 ANKRD30AQ9BXX3 1397 aa11.33□□□□□ -0.6
SF3A3P1-201ENST00000446317 KIDINS220Q9ULH0 1771 aa11.33□□□□□ -0.6
SF3A3P1-201ENST00000446317 ADGBQ8N7X0 1667 aa11.33□□□□□ -0.6
SF3A3P1-201ENST00000446317 KDM5CP41229 1560 aa11.33□□□□□ -0.6
SF3A3P1-201ENST00000446317 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
SF3A3P1-201ENST00000446317 NCOA1Q15788 1441 aa11.32□□□□□ -0.6
SF3A3P1-201ENST00000446317 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
SF3A3P1-201ENST00000446317 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
SF3A3P1-201ENST00000446317 DIP2CQ9Y2E4 1556 aa11.31□□□□□ -0.6
SF3A3P1-201ENST00000446317 NAIPQ13075 1403 aa11.31□□□□□ -0.6
SF3A3P1-201ENST00000446317 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
SF3A3P1-201ENST00000446317 SIGLEC1Q9BZZ2 1709 aa11.3□□□□□ -0.6
SF3A3P1-201ENST00000446317 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
SF3A3P1-201ENST00000446317 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
SF3A3P1-201ENST00000446317 ADGRL2O95490 1459 aa11.29□□□□□ -0.6
SF3A3P1-201ENST00000446317 MLH3Q9UHC1 1453 aa11.29□□□□□ -0.6
SF3A3P1-201ENST00000446317 KIF3BO15066 747 aa11.29□□□□□ -0.6
SF3A3P1-201ENST00000446317 GGT6Q6P531 493 aa11.29□□□□□ -0.6
SF3A3P1-201ENST00000446317 ZMYM4Q5VZL5 1548 aa11.29□□□□□ -0.6
SF3A3P1-201ENST00000446317 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
SF3A3P1-201ENST00000446317 A2MP01023 1474 aa11.28□□□□□ -0.6
SF3A3P1-201ENST00000446317 ARHGEF40Q8TER5 1519 aa11.27□□□□□ -0.6
SF3A3P1-201ENST00000446317 ROCK1Q13464 1354 aa11.27□□□□□ -0.61
SF3A3P1-201ENST00000446317 HFM1A2PYH4 1435 aa11.27□□□□□ -0.61
SF3A3P1-201ENST00000446317 RTEL1-TNFRSF6BF6WH68 1400 aa11.27□□□□□ -0.61
SF3A3P1-201ENST00000446317 ANKRD50Q9ULJ7 1429 aa11.27□□□□□ -0.61
SF3A3P1-201ENST00000446317 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
SF3A3P1-201ENST00000446317 ATP10AO60312 1499 aa11.26□□□□□ -0.61
SF3A3P1-201ENST00000446317 GCC2Q8IWJ2 1684 aa11.26□□□□□ -0.61
SF3A3P1-201ENST00000446317 DHX29Q7Z478 1369 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms