RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 MLECQ14165 292 aa24.96■■□□□ 1.59
UBE2F-216ENST00000445676 PREX1Q8TCU6 1659 aa24.96■■□□□ 1.59
UBE2F-216ENST00000445676 SCAPERQ9BY12 1400 aa24.95■■□□□ 1.59
UBE2F-216ENST00000445676 MYO5CQ9NQX4 1742 aa24.95■■□□□ 1.59
UBE2F-216ENST00000445676 PLCH2O75038 1416 aa24.95■■□□□ 1.58
UBE2F-216ENST00000445676 CERKQ8TCT0 537 aa24.93■■□□□ 1.58
UBE2F-216ENST00000445676 C9orf84Q5VXU9 1444 aa24.9■■□□□ 1.58
UBE2F-216ENST00000445676 ATP10AO60312 1499 aa24.89■■□□□ 1.58
UBE2F-216ENST00000445676 STRCQ7RTU9 1775 aa24.88■■□□□ 1.57
UBE2F-216ENST00000445676 KIF14Q15058 1648 aa24.87■■□□□ 1.57
UBE2F-216ENST00000445676 SETD1BQ9UPS6 1966 aaKnown RBP24.84■■□□□ 1.57
UBE2F-216ENST00000445676 KDM5CP41229 1560 aa24.83■■□□□ 1.57
UBE2F-216ENST00000445676 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
UBE2F-216ENST00000445676 ZNF518AQ6AHZ1 1483 aa24.8■■□□□ 1.56
UBE2F-216ENST00000445676 LRRIQ1Q96JM4 1722 aa24.8■■□□□ 1.56
UBE2F-216ENST00000445676 EFCAB2Q5VUJ9 269 aa24.79■■□□□ 1.56
UBE2F-216ENST00000445676 DIP2CQ9Y2E4 1556 aa24.79■■□□□ 1.56
UBE2F-216ENST00000445676 FMN1Q68DA7 1419 aa24.78■■□□□ 1.56
UBE2F-216ENST00000445676 ARHGAP5Q13017 1502 aa24.76■■□□□ 1.55
UBE2F-216ENST00000445676 ARHGAP35Q9NRY4 1499 aa24.76■■□□□ 1.55
UBE2F-216ENST00000445676 ABCA6Q8N139 1617 aa24.75■■□□□ 1.55
UBE2F-216ENST00000445676 C3P01024 1663 aa24.75■■□□□ 1.55
UBE2F-216ENST00000445676 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
UBE2F-216ENST00000445676 UHRF1BP1Q6BDS2 1440 aa24.75■■□□□ 1.55
UBE2F-216ENST00000445676 REREQ9P2R6 1566 aa24.75■■□□□ 1.55
UBE2F-216ENST00000445676 TROQ12816 1431 aaPredicted RBP24.74■■□□□ 1.55
UBE2F-216ENST00000445676 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
UBE2F-216ENST00000445676 AFAP1Q8N556 730 aa24.71■■□□□ 1.55
UBE2F-216ENST00000445676 CDK11AQ9UQ88 783 aaPredicted RBP24.68■■□□□ 1.54
UBE2F-216ENST00000445676 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
UBE2F-216ENST00000445676 ITSN2Q9NZM3 1697 aa24.67■■□□□ 1.54
UBE2F-216ENST00000445676 DMRT2Q9Y5R5 561 aa24.67■■□□□ 1.54
UBE2F-216ENST00000445676 MLH3Q9UHC1 1453 aa24.66■■□□□ 1.54
UBE2F-216ENST00000445676 CLIP1P30622 1438 aa24.66■■□□□ 1.54
UBE2F-216ENST00000445676 DISP3Q9P2K9 1392 aa24.66■■□□□ 1.54
UBE2F-216ENST00000445676 ABCC1P33527 1531 aa24.66■■□□□ 1.54
UBE2F-216ENST00000445676 ILDR2Q71H61 639 aa24.65■■□□□ 1.54
UBE2F-216ENST00000445676 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
UBE2F-216ENST00000445676 AGLP35573 1532 aa24.65■■□□□ 1.54
UBE2F-216ENST00000445676 PTPRTO14522 1441 aa24.63■■□□□ 1.53
UBE2F-216ENST00000445676 UBTFP17480 764 aaKnown RBP24.63■■□□□ 1.53
UBE2F-216ENST00000445676 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
UBE2F-216ENST00000445676 TRAPPC8Q9Y2L5 1435 aa24.61■■□□□ 1.53
UBE2F-216ENST00000445676 MYT1LQ9UL68 1186 aa24.61■■□□□ 1.53
UBE2F-216ENST00000445676 LTBP4Q8N2S1 1624 aa24.6■■□□□ 1.53
UBE2F-216ENST00000445676 SPATA31D1Q6ZQQ2 1576 aa24.59■■□□□ 1.53
UBE2F-216ENST00000445676 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
UBE2F-216ENST00000445676 NCOA1Q15788 1441 aa24.55■■□□□ 1.52
UBE2F-216ENST00000445676 MROH2AA6NES4 1674 aa24.53■■□□□ 1.52
UBE2F-216ENST00000445676 SOCS7O14512 581 aa24.53■■□□□ 1.52
UBE2F-216ENST00000445676 CNTLNQ9NXG0 1405 aa24.52■■□□□ 1.52
UBE2F-216ENST00000445676 IQSEC2Q5JU85 1478 aa24.51■■□□□ 1.51
UBE2F-216ENST00000445676 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
UBE2F-216ENST00000445676 ESF1Q9H501 851 aaKnown RBP24.5■■□□□ 1.51
UBE2F-216ENST00000445676 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
UBE2F-216ENST00000445676 CAMSAP1Q5T5Y3 1602 aa24.49■■□□□ 1.51
UBE2F-216ENST00000445676 CASKIN1Q8WXD9 1431 aa24.48■■□□□ 1.51
UBE2F-216ENST00000445676 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
UBE2F-216ENST00000445676 NPATQ14207 1427 aa24.45■■□□□ 1.51
UBE2F-216ENST00000445676 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
UBE2F-216ENST00000445676 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
UBE2F-216ENST00000445676 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
UBE2F-216ENST00000445676 MYO3AQ8NEV4 1616 aa24.42■■□□□ 1.5
UBE2F-216ENST00000445676 PLXNC1O60486 1568 aa24.4■■□□□ 1.5
UBE2F-216ENST00000445676 ZMYM3Q14202 1370 aa24.39■■□□□ 1.49
UBE2F-216ENST00000445676 INO80Q9ULG1 1556 aaPredicted RBP24.38■■□□□ 1.49
UBE2F-216ENST00000445676 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
UBE2F-216ENST00000445676 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
UBE2F-216ENST00000445676 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
UBE2F-216ENST00000445676 CEP170BQ9Y4F5 1589 aaPredicted RBP24.35■■□□□ 1.49
UBE2F-216ENST00000445676 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
UBE2F-216ENST00000445676 SPAG9O60271 1321 aaKnown RBP24.34■■□□□ 1.49
UBE2F-216ENST00000445676 ZNF335Q9H4Z2 1342 aaPredicted RBP24.34■■□□□ 1.49
UBE2F-216ENST00000445676 NCKAP5LQ9HCH0 1330 aa24.34■■□□□ 1.49
UBE2F-216ENST00000445676 PLA2R1Q13018 1463 aa24.33■■□□□ 1.49
UBE2F-216ENST00000445676 PTPRKQ15262 1439 aa24.31■■□□□ 1.48
UBE2F-216ENST00000445676 A2MP01023 1474 aa24.31■■□□□ 1.48
UBE2F-216ENST00000445676 TCOF1Q13428 1488 aaKnown RBP24.31■■□□□ 1.48
UBE2F-216ENST00000445676 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.482e-6■■■□□ 16.1
UBE2F-216ENST00000445676 CHIC1Q5VXU3 224 aa24.29■■□□□ 1.48
UBE2F-216ENST00000445676 KIAA1107Q9UPP5 1409 aa24.28■■□□□ 1.48
UBE2F-216ENST00000445676 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
UBE2F-216ENST00000445676 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
UBE2F-216ENST00000445676 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
UBE2F-216ENST00000445676 PKD2Q13563 968 aa24.25■■□□□ 1.47
UBE2F-216ENST00000445676 POLR1AO95602 1720 aaPredicted RBP24.21■■□□□ 1.47
UBE2F-216ENST00000445676 DNMT1P26358 1616 aaKnown RBP24.21■■□□□ 1.47
UBE2F-216ENST00000445676 GGT6Q6P531 493 aa24.2■■□□□ 1.46
UBE2F-216ENST00000445676 CFDP1Q9UEE9 299 aaPredicted RBP24.2■■□□□ 1.46
UBE2F-216ENST00000445676 CCNB3Q8WWL7 1395 aa24.19■■□□□ 1.46
UBE2F-216ENST00000445676 A2ML1A8K2U0 1454 aa24.19■■□□□ 1.46
UBE2F-216ENST00000445676 TIAM1Q13009 1591 aa24.18■■□□□ 1.46
UBE2F-216ENST00000445676 PPP6R1Q9UPN7 881 aa24.16■■□□□ 1.46
UBE2F-216ENST00000445676 NEURL4Q96JN8 1562 aa24.16■■□□□ 1.46
UBE2F-216ENST00000445676 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
UBE2F-216ENST00000445676 MTUS2Q5JR59 1369 aa24.12■■□□□ 1.45
UBE2F-216ENST00000445676 ZNF644Q9H582 1327 aaPredicted RBP24.11■■□□□ 1.45
UBE2F-216ENST00000445676 MED1Q15648 1581 aaPredicted RBP24.11■■□□□ 1.45
UBE2F-216ENST00000445676 CPS1P31327 1500 aa24.09■■□□□ 1.45
UBE2F-216ENST00000445676 EHBP1L1Q8N3D4 1523 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms