RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 TCOF1Q13428 1488 aaKnown RBP12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 SIGLEC1Q9BZZ2 1709 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
BRAFP1-201ENST00000445336 CAMSAP1Q5T5Y3 1602 aa12.58□□□□□ -0.39
BRAFP1-201ENST00000445336 C3P01024 1663 aa12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 RNF17Q9BXT8 1623 aaKnown RBP12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 DISP1Q96F81 1524 aa12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 SYNMO15061 1565 aa12.57□□□□□ -0.4
BRAFP1-201ENST00000445336 ABCA8O94911 1581 aa12.56□□□□□ -0.4
BRAFP1-201ENST00000445336 AGLP35573 1532 aa12.56□□□□□ -0.4
BRAFP1-201ENST00000445336 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
BRAFP1-201ENST00000445336 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
BRAFP1-201ENST00000445336 POTEAQ6S8J7 498 aa12.54□□□□□ -0.4
BRAFP1-201ENST00000445336 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
BRAFP1-201ENST00000445336 ATP10AO60312 1499 aa12.51□□□□□ -0.41
BRAFP1-201ENST00000445336 RAPGEF3O95398 923 aa12.51□□□□□ -0.41
BRAFP1-201ENST00000445336 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
BRAFP1-201ENST00000445336 ZNF335Q9H4Z2 1342 aaPredicted RBP12.5□□□□□ -0.41
BRAFP1-201ENST00000445336 SHANK2Q9UPX8 1470 aa12.48□□□□□ -0.41
BRAFP1-201ENST00000445336 POLR1AO95602 1720 aaPredicted RBP12.46□□□□□ -0.42
BRAFP1-201ENST00000445336 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
BRAFP1-201ENST00000445336 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
BRAFP1-201ENST00000445336 SUPT6HQ7KZ85 1726 aaKnown RBP12.44□□□□□ -0.42
BRAFP1-201ENST00000445336 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
BRAFP1-201ENST00000445336 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
BRAFP1-201ENST00000445336 VWDEQ8N2E2 1590 aa12.42□□□□□ -0.42
BRAFP1-201ENST00000445336 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
BRAFP1-201ENST00000445336 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
BRAFP1-201ENST00000445336 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 KDM5CP41229 1560 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 PPP6R1Q9UPN7 881 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 GOLGA3Q08378 1498 aa12.37□□□□□ -0.43
BRAFP1-201ENST00000445336 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
BRAFP1-201ENST00000445336 SLC34A2O95436 690 aa12.37□□□□□ -0.43
BRAFP1-201ENST00000445336 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
BRAFP1-201ENST00000445336 DEPDC5O75140 1603 aa12.36□□□□□ -0.43
BRAFP1-201ENST00000445336 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
BRAFP1-201ENST00000445336 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
BRAFP1-201ENST00000445336 SETBP1Q9Y6X0 1596 aa12.33□□□□□ -0.44
BRAFP1-201ENST00000445336 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
BRAFP1-201ENST00000445336 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
BRAFP1-201ENST00000445336 MED14O60244 1454 aa12.32□□□□□ -0.44
BRAFP1-201ENST00000445336 IGF1RP08069 1367 aa12.3□□□□□ -0.44
BRAFP1-201ENST00000445336 KIF14Q15058 1648 aa12.29□□□□□ -0.44
BRAFP1-201ENST00000445336 CCDC125Q86Z20 511 aa12.28□□□□□ -0.44
BRAFP1-201ENST00000445336 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
BRAFP1-201ENST00000445336 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
BRAFP1-201ENST00000445336 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.45
BRAFP1-201ENST00000445336 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
BRAFP1-201ENST00000445336 KDM5DQ9BY66 1539 aa12.25□□□□□ -0.45
BRAFP1-201ENST00000445336 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
BRAFP1-201ENST00000445336 ATP10BO94823 1461 aa12.24□□□□□ -0.45
BRAFP1-201ENST00000445336 NWD1Q149M9 1564 aa12.23□□□□□ -0.45
BRAFP1-201ENST00000445336 DIP2CQ9Y2E4 1556 aa12.23□□□□□ -0.45
BRAFP1-201ENST00000445336 ATAD2Q6PL18 1390 aa12.23□□□□□ -0.45
BRAFP1-201ENST00000445336 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 JCADQ9P266 1359 aa12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 SPATA31A6Q5VVP1 1343 aa12.21□□□□□ -0.45
BRAFP1-201ENST00000445336 SHPRHQ149N8 1683 aa12.21□□□□□ -0.45
BRAFP1-201ENST00000445336 FAM135AQ9P2D6 1515 aa12.19□□□□□ -0.46
BRAFP1-201ENST00000445336 RXRBP28702 533 aa12.18□□□□□ -0.46
BRAFP1-201ENST00000445336 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 MLECQ14165 292 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 MLH3Q9UHC1 1453 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
BRAFP1-201ENST00000445336 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
BRAFP1-201ENST00000445336 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
BRAFP1-201ENST00000445336 CTTNBP2Q8WZ74 1663 aa12.15□□□□□ -0.46
BRAFP1-201ENST00000445336 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
BRAFP1-201ENST00000445336 YY1P25490 414 aa12.14□□□□□ -0.47
BRAFP1-201ENST00000445336 ESF1Q9H501 851 aaKnown RBP12.14□□□□□ -0.47
BRAFP1-201ENST00000445336 PHLPP1O60346 1717 aa12.13□□□□□ -0.47
BRAFP1-201ENST00000445336 ROBO1Q9Y6N7 1651 aa12.13□□□□□ -0.47
BRAFP1-201ENST00000445336 ABCC3O15438 1527 aa12.11□□□□□ -0.47
BRAFP1-201ENST00000445336 NPHP4O75161 1426 aaPredicted RBP12.1□□□□□ -0.47
BRAFP1-201ENST00000445336 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
BRAFP1-201ENST00000445336 RGS12O14924 1447 aa12.09□□□□□ -0.47
BRAFP1-201ENST00000445336 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
BRAFP1-201ENST00000445336 COL16A1Q07092 1604 aaPredicted RBP12.09□□□□□ -0.47
BRAFP1-201ENST00000445336 ATP7AQ04656 1500 aa12.08□□□□□ -0.48
BRAFP1-201ENST00000445336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
BRAFP1-201ENST00000445336 ZMYM3Q14202 1370 aa12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 PLCH2O75038 1416 aa12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 ZC3H13Q5T200 1668 aaKnown RBP12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
BRAFP1-201ENST00000445336 LRP6O75581 1613 aa12.05□□□□□ -0.48
BRAFP1-201ENST00000445336 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
BRAFP1-201ENST00000445336 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
BRAFP1-201ENST00000445336 UNC13BO14795 1591 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms