RNA–Protein interactions for RNA: ENST00000445186.5

GLI2-209, Transcript of GLI family zinc finger 2, humanhuman

TSL 5

Gene GLI2, Length 4,955 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI2-209ENST00000445186 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
GLI2-209ENST00000445186 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
GLI2-209ENST00000445186 CFTRP13569 1480 aa21.91■■□□□ 1.1
GLI2-209ENST00000445186 IGF1RP08069 1367 aa21.9■■□□□ 1.1
GLI2-209ENST00000445186 NBR1Q14596 966 aa21.9■■□□□ 1.1
GLI2-209ENST00000445186 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.1
GLI2-209ENST00000445186 TNNT2P45379 298 aaPredicted RBP21.89■■□□□ 1.09
GLI2-209ENST00000445186 BECN1Q14457 450 aa21.89■■□□□ 1.09
GLI2-209ENST00000445186 TMF1P82094 1093 aa21.88■■□□□ 1.09
GLI2-209ENST00000445186 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
GLI2-209ENST00000445186 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
GLI2-209ENST00000445186 U2SURPO15042 1029 aaKnown RBP21.85■■□□□ 1.09
GLI2-209ENST00000445186 CC2D1BQ5T0F9 858 aaKnown RBP21.83■■□□□ 1.08
GLI2-209ENST00000445186 SUPT16HQ9Y5B9 1047 aaKnown RBP21.82■■□□□ 1.08
GLI2-209ENST00000445186 EIF5BO60841 1220 aaKnown RBP21.82■■□□□ 1.08
GLI2-209ENST00000445186 DDRGK1Q96HY6 314 aa21.82■■□□□ 1.08
GLI2-209ENST00000445186 SOX12O15370 315 aa21.81■■□□□ 1.08
GLI2-209ENST00000445186 PNNQ9H307 717 aaKnown RBP21.8■■□□□ 1.08
GLI2-209ENST00000445186 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
GLI2-209ENST00000445186 NCLP19338 710 aaKnown RBP21.8■■□□□ 1.08
GLI2-209ENST00000445186 CHMP4BQ9H444 224 aaKnown RBP21.78■■□□□ 1.08
GLI2-209ENST00000445186 NPHP1O15259 732 aa21.78■■□□□ 1.08
GLI2-209ENST00000445186 CASC1Q6TDU7 716 aa21.77■■□□□ 1.08
GLI2-209ENST00000445186 FRAT1Q92837 279 aaPredicted RBP21.77■■□□□ 1.08
GLI2-209ENST00000445186 PRG4Q92954 1404 aaPredicted RBP21.77■■□□□ 1.08
GLI2-209ENST00000445186 GOLGA6L22H0YM25 854 aa21.76■■□□□ 1.07
GLI2-209ENST00000445186 MS4A1P11836 297 aa21.75■■□□□ 1.07
GLI2-209ENST00000445186 HDGFL2Q7Z4V5 671 aaPredicted RBP21.75■■□□□ 1.07
GLI2-209ENST00000445186 SETD5Q9C0A6 1442 aa21.75■■□□□ 1.07
GLI2-209ENST00000445186 CDK11BP21127 795 aaKnown RBP21.74■■□□□ 1.07
GLI2-209ENST00000445186 CCDC9Q9Y3X0 531 aaKnown RBP21.73■■□□□ 1.07
GLI2-209ENST00000445186 MPHOSPH9Q99550 1183 aa21.72■■□□□ 1.07
GLI2-209ENST00000445186 ANP32EQ9BTT0 268 aa21.71■■□□□ 1.07
GLI2-209ENST00000445186 CSB-PGBD3P0DP91 1061 aa21.71■■□□□ 1.07
GLI2-209ENST00000445186 FOXD1Q16676 465 aa21.7■■□□□ 1.06
GLI2-209ENST00000445186 MORC1Q86VD1 984 aa21.7■■□□□ 1.06
GLI2-209ENST00000445186 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
GLI2-209ENST00000445186 NUTM2DQ5VT03 806 aaPredicted RBP21.69■■□□□ 1.06
GLI2-209ENST00000445186 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
GLI2-209ENST00000445186 RGS3P49796 1198 aa21.66■■□□□ 1.06
GLI2-209ENST00000445186 PPP4R2Q9NY27 417 aa21.66■■□□□ 1.06
GLI2-209ENST00000445186 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
GLI2-209ENST00000445186 OS9Q13438 667 aaPredicted RBP21.65■■□□□ 1.06
GLI2-209ENST00000445186 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.06
GLI2-209ENST00000445186 ZRSR1Q15695 479 aaKnown RBP21.63■■□□□ 1.05
GLI2-209ENST00000445186 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
GLI2-209ENST00000445186 HSPA5P11021 654 aaKnown RBP21.61■■□□□ 1.05
GLI2-209ENST00000445186 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
GLI2-209ENST00000445186 VGFO15240 615 aaPredicted RBP21.61■■□□□ 1.05
GLI2-209ENST00000445186 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
GLI2-209ENST00000445186 SYNJ2O15056 1496 aa21.59■■□□□ 1.05
GLI2-209ENST00000445186 TRIM44Q96DX7 344 aaPredicted RBP21.56■■□□□ 1.04
GLI2-209ENST00000445186 EIF3AQ14152 1382 aaKnown RBP21.56■■□□□ 1.04
GLI2-209ENST00000445186 RTF1Q92541 710 aaKnown RBP21.56■■□□□ 1.04
GLI2-209ENST00000445186 FGD1P98174 961 aa21.55■■□□□ 1.04
GLI2-209ENST00000445186 ROCK2O75116 1388 aaKnown RBP21.54■■□□□ 1.04
GLI2-209ENST00000445186 NUTM2FA1L443 756 aa21.54■■□□□ 1.04
GLI2-209ENST00000445186 CCER2I3L3R5 266 aa21.54■■□□□ 1.04
GLI2-209ENST00000445186 KCNJ4P48050 445 aa21.54■■□□□ 1.04
GLI2-209ENST00000445186 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
GLI2-209ENST00000445186 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.53■■□□□ 1.04
GLI2-209ENST00000445186 GOLGA2Q08379 1002 aa21.52■■□□□ 1.04
GLI2-209ENST00000445186 KTN1Q86UP2 1357 aaKnown RBP21.52■■□□□ 1.03
GLI2-209ENST00000445186 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
GLI2-209ENST00000445186 UACAQ9BZF9 1416 aa21.5■■□□□ 1.03
GLI2-209ENST00000445186 RAB3GAP2Q9H2M9 1393 aa21.49■■□□□ 1.03
GLI2-209ENST00000445186 U2AF1L5P0DN76 240 aaPredicted RBP21.48■■□□□ 1.03
GLI2-209ENST00000445186 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.03
GLI2-209ENST00000445186 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
GLI2-209ENST00000445186 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
GLI2-209ENST00000445186 B4GALNT3Q6L9W6 998 aa21.47■■□□□ 1.03
GLI2-209ENST00000445186 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
GLI2-209ENST00000445186 PRDM2Q13029 1718 aa21.47■■□□□ 1.03
GLI2-209ENST00000445186 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
GLI2-209ENST00000445186 PTMAP06454 111 aaKnown RBP21.45■■□□□ 1.02
GLI2-209ENST00000445186 TPRNQ4KMQ1 711 aa21.45■■□□□ 1.02
GLI2-209ENST00000445186 IPO8O15397 1037 aaKnown RBP21.45■■□□□ 1.02
GLI2-209ENST00000445186 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
GLI2-209ENST00000445186 GLIPR1L2Q4G1C9 344 aa21.43■■□□□ 1.02
GLI2-209ENST00000445186 MEX3CQ5U5Q3 659 aaKnown RBP21.43■■□□□ 1.02
GLI2-209ENST00000445186 RALBP1Q15311 655 aa21.43■■□□□ 1.02
GLI2-209ENST00000445186 HSP90AB1P08238 724 aaKnown RBP21.42■■□□□ 1.02
GLI2-209ENST00000445186 ATF3P18847 181 aa21.41■■□□□ 1.02
GLI2-209ENST00000445186 TAOK2Q9UL54 1235 aa21.41■■□□□ 1.02
GLI2-209ENST00000445186 NAP1L2Q9ULW6 460 aaPredicted RBP21.4■■□□□ 1.02
GLI2-209ENST00000445186 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
GLI2-209ENST00000445186 AMPHP49418 695 aa21.39■■□□□ 1.02
GLI2-209ENST00000445186 POGZQ7Z3K3 1410 aa21.39■■□□□ 1.02
GLI2-209ENST00000445186 CHMP4AQ9BY43 222 aa21.39■■□□□ 1.02
GLI2-209ENST00000445186 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.01
GLI2-209ENST00000445186 KIF15Q9NS87 1388 aa21.39■■□□□ 1.01
GLI2-209ENST00000445186 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
GLI2-209ENST00000445186 CUX1P39880 1505 aa21.37■■□□□ 1.01
GLI2-209ENST00000445186 EVA1CP58658 441 aa21.36■■□□□ 1.01
GLI2-209ENST00000445186 CFAP44Q96MT7 982 aa21.36■■□□□ 1.01
GLI2-209ENST00000445186 KIAA0586Q9BVV6 1533 aa21.35■■□□□ 1.01
GLI2-209ENST00000445186 TULP1O00294 542 aaPredicted RBP21.34■■□□□ 1.01
GLI2-209ENST00000445186 RAPGEF3O95398 923 aa21.34■■□□□ 1.01
GLI2-209ENST00000445186 MCCP23508 829 aa21.34■■□□□ 1.01
GLI2-209ENST00000445186 THEMISQ8N1K5 641 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms