RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 CFDP1Q9UEE9 299 aaPredicted RBP19.78■□□□□ 0.76
RBM39-216ENST00000444878 GPATCH8Q9UKJ3 1502 aaKnown RBP19.78■□□□□ 0.76
RBM39-216ENST00000444878 ABCC5O15440 1437 aa19.77■□□□□ 0.75
RBM39-216ENST00000444878 ROCK1Q13464 1354 aa19.76■□□□□ 0.75
RBM39-216ENST00000444878 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
RBM39-216ENST00000444878 KDM6BO15054 1643 aa19.74■□□□□ 0.75
RBM39-216ENST00000444878 CDC42BPAQ5VT25 1732 aa19.74■□□□□ 0.75
RBM39-216ENST00000444878 TRIM52Q96A61 297 aa19.72■□□□□ 0.75
RBM39-216ENST00000444878 ZNF777Q9ULD5 760 aaPredicted RBP19.71■□□□□ 0.75
RBM39-216ENST00000444878 ABCC10Q5T3U5 1492 aa19.7■□□□□ 0.74
RBM39-216ENST00000444878 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
RBM39-216ENST00000444878 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
RBM39-216ENST00000444878 RTN4Q9NQC3 1192 aaKnown RBP19.69■□□□□ 0.74
RBM39-216ENST00000444878 ADGBQ8N7X0 1667 aa19.68■□□□□ 0.74
RBM39-216ENST00000444878 ERCC6L2Q5T890 1561 aa19.68■□□□□ 0.74
RBM39-216ENST00000444878 MIER1Q8N108 512 aa19.67■□□□□ 0.74
RBM39-216ENST00000444878 CROCC2H7BZ55 1655 aa19.67■□□□□ 0.74
RBM39-216ENST00000444878 PPP1R15AO75807 674 aaPredicted RBP19.67■□□□□ 0.74
RBM39-216ENST00000444878 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
RBM39-216ENST00000444878 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
RBM39-216ENST00000444878 DENND4BO75064 1496 aaPredicted RBP19.63■□□□□ 0.73
RBM39-216ENST00000444878 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
RBM39-216ENST00000444878 NCOA1Q15788 1441 aa19.62■□□□□ 0.73
RBM39-216ENST00000444878 ADGRL2O95490 1459 aa19.6■□□□□ 0.73
RBM39-216ENST00000444878 CDC42BPBQ9Y5S2 1711 aa19.58■□□□□ 0.73
RBM39-216ENST00000444878 ANKRD30AQ9BXX3 1397 aa19.58■□□□□ 0.72
RBM39-216ENST00000444878 PREX2Q70Z35 1606 aa19.57■□□□□ 0.72
RBM39-216ENST00000444878 CENPBP07199 599 aaPredicted RBP19.57■□□□□ 0.72
RBM39-216ENST00000444878 SHANK2Q9UPX8 1470 aa19.55■□□□□ 0.72
RBM39-216ENST00000444878 C9orf84Q5VXU9 1444 aa19.53■□□□□ 0.72
RBM39-216ENST00000444878 TSPY4P0CV99 314 aa19.53■□□□□ 0.72
RBM39-216ENST00000444878 TSPY10P0CW01 314 aa19.53■□□□□ 0.72
RBM39-216ENST00000444878 SLC4A1APQ9BWU0 796 aaKnown RBP19.53■□□□□ 0.72
RBM39-216ENST00000444878 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
RBM39-216ENST00000444878 FOXD1Q16676 465 aa19.52■□□□□ 0.72
RBM39-216ENST00000444878 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
RBM39-216ENST00000444878 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.71
RBM39-216ENST00000444878 SAMD9LQ8IVG5 1584 aa19.52■□□□□ 0.71
RBM39-216ENST00000444878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.51■□□□□ 0.71
RBM39-216ENST00000444878 ZCCHC11Q5TAX3 1644 aaKnown RBP19.51■□□□□ 0.71
RBM39-216ENST00000444878 UHRF1BP1LA0JNW5 1464 aa19.51■□□□□ 0.71
RBM39-216ENST00000444878 HNRNPMP52272 730 aaKnown RBP eCLIP19.51■□□□□ 0.71
RBM39-216ENST00000444878 MYO5CQ9NQX4 1742 aa19.5■□□□□ 0.71
RBM39-216ENST00000444878 KDM5BQ9UGL1 1544 aa19.5■□□□□ 0.71
RBM39-216ENST00000444878 ANKRD50Q9ULJ7 1429 aa19.5■□□□□ 0.71
RBM39-216ENST00000444878 ANKRD30BQ9BXX2 1392 aa19.49■□□□□ 0.71
RBM39-216ENST00000444878 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
RBM39-216ENST00000444878 ARHGAP5Q13017 1502 aa19.48■□□□□ 0.71
RBM39-216ENST00000444878 YTHDC1Q96MU7 727 aaKnown RBP19.48■□□□□ 0.71
RBM39-216ENST00000444878 PZPP20742 1482 aa19.48■□□□□ 0.71
RBM39-216ENST00000444878 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
RBM39-216ENST00000444878 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
RBM39-216ENST00000444878 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
RBM39-216ENST00000444878 RPRD2Q5VT52 1461 aaKnown RBP19.44■□□□□ 0.7
RBM39-216ENST00000444878 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
RBM39-216ENST00000444878 SYCP2Q9BX26 1530 aa19.43■□□□□ 0.7
RBM39-216ENST00000444878 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
RBM39-216ENST00000444878 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
RBM39-216ENST00000444878 DDX10Q13206 875 aaKnown RBP19.4■□□□□ 0.7
RBM39-216ENST00000444878 PLEKHH2Q8IVE3 1493 aa19.4■□□□□ 0.7
RBM39-216ENST00000444878 KIAA1107Q9UPP5 1409 aa19.4■□□□□ 0.7
RBM39-216ENST00000444878 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.7
RBM39-216ENST00000444878 NUP155O75694 1391 aa19.38■□□□□ 0.69
RBM39-216ENST00000444878 PKD2Q13563 968 aa19.37■□□□□ 0.69
RBM39-216ENST00000444878 MAST1Q9Y2H9 1570 aa19.37■□□□□ 0.69
RBM39-216ENST00000444878 PLCH2O75038 1416 aa19.36■□□□□ 0.69
RBM39-216ENST00000444878 TEX14Q8IWB6 1497 aa19.36■□□□□ 0.69
RBM39-216ENST00000444878 KDM5DQ9BY66 1539 aa19.35■□□□□ 0.69
RBM39-216ENST00000444878 EFCAB2Q5VUJ9 269 aa19.34■□□□□ 0.69
RBM39-216ENST00000444878 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
RBM39-216ENST00000444878 PLXNC1O60486 1568 aa19.3■□□□□ 0.68
RBM39-216ENST00000444878 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
RBM39-216ENST00000444878 WDR7Q9Y4E6 1490 aa19.29■□□□□ 0.68
RBM39-216ENST00000444878 EIF4G2P78344 907 aaKnown RBP eCLIP19.29■□□□□ 0.68
RBM39-216ENST00000444878 ABCC1P33527 1531 aa19.28■□□□□ 0.68
RBM39-216ENST00000444878 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
RBM39-216ENST00000444878 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.68
RBM39-216ENST00000444878 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.67
RBM39-216ENST00000444878 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
RBM39-216ENST00000444878 UNC13BO14795 1591 aa19.24■□□□□ 0.67
RBM39-216ENST00000444878 DUOX2Q9NRD8 1548 aa19.24■□□□□ 0.67
RBM39-216ENST00000444878 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
RBM39-216ENST00000444878 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
RBM39-216ENST00000444878 TRAPPC8Q9Y2L5 1435 aa19.21■□□□□ 0.67
RBM39-216ENST00000444878 ANP32CO43423 234 aa19.21■□□□□ 0.67
RBM39-216ENST00000444878 AMER1Q5JTC6 1135 aaPredicted RBP19.2■□□□□ 0.66
RBM39-216ENST00000444878 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
RBM39-216ENST00000444878 ERBINQ96RT1 1412 aa19.19■□□□□ 0.66
RBM39-216ENST00000444878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.664e-13■■□□□ 11.5
RBM39-216ENST00000444878 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
RBM39-216ENST00000444878 IQGAP3Q86VI3 1631 aa19.18■□□□□ 0.66
RBM39-216ENST00000444878 FANCAO15360 1455 aa19.17■□□□□ 0.66
RBM39-216ENST00000444878 NPM1P06748 294 aaKnown RBP eCLIP19.17■□□□□ 0.66
RBM39-216ENST00000444878 SPAG9O60271 1321 aaKnown RBP19.17■□□□□ 0.66
RBM39-216ENST00000444878 ZNF326Q5BKZ1 582 aaKnown RBP19.16■□□□□ 0.66
RBM39-216ENST00000444878 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
RBM39-216ENST00000444878 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
RBM39-216ENST00000444878 POLR1AO95602 1720 aaPredicted RBP19.14■□□□□ 0.65
RBM39-216ENST00000444878 SPATA31E1Q6ZUB1 1445 aa19.13■□□□□ 0.65
RBM39-216ENST00000444878 MAGI2Q86UL8 1455 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms