RNA–Protein interactions for RNA: ENST00000444376.7

HNRNPU-205, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-205ENST00000444376 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.93
HNRNPU-205ENST00000444376 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
HNRNPU-205ENST00000444376 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
HNRNPU-205ENST00000444376 KTN1Q86UP2 1357 aaKnown RBP20.81■□□□□ 0.92
HNRNPU-205ENST00000444376 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
HNRNPU-205ENST00000444376 NACADO15069 1562 aa20.77■□□□□ 0.91
HNRNPU-205ENST00000444376 SOX12O15370 315 aa20.76■□□□□ 0.91
HNRNPU-205ENST00000444376 PTMSP20962 102 aa20.76■□□□□ 0.91
HNRNPU-205ENST00000444376 RTF1Q92541 710 aaKnown RBP20.75■□□□□ 0.91
HNRNPU-205ENST00000444376 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
HNRNPU-205ENST00000444376 GBP4Q96PP9 640 aa20.73■□□□□ 0.91
HNRNPU-205ENST00000444376 SAFB2Q14151 953 aaKnown RBP eCLIP20.73■□□□□ 0.91
HNRNPU-205ENST00000444376 RCAN3Q9UKA8 241 aa20.73■□□□□ 0.91
HNRNPU-205ENST00000444376 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
HNRNPU-205ENST00000444376 APBB1O00213 710 aa20.71■□□□□ 0.91
HNRNPU-205ENST00000444376 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
HNRNPU-205ENST00000444376 HDGFP51858 240 aaKnown RBP20.71■□□□□ 0.91
HNRNPU-205ENST00000444376 GNL2Q13823 731 aaKnown RBP20.7■□□□□ 0.9
HNRNPU-205ENST00000444376 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
HNRNPU-205ENST00000444376 RWDD1Q9H446 243 aaPredicted RBP20.69■□□□□ 0.9
HNRNPU-205ENST00000444376 SOGA1O94964 1423 aa20.69■□□□□ 0.9
HNRNPU-205ENST00000444376 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
HNRNPU-205ENST00000444376 CUX2O14529 1486 aa20.68■□□□□ 0.9
HNRNPU-205ENST00000444376 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
HNRNPU-205ENST00000444376 TCERG1O14776 1098 aaKnown RBP20.68■□□□□ 0.9
HNRNPU-205ENST00000444376 HDGFL2Q7Z4V5 671 aaPredicted RBP20.68■□□□□ 0.9
HNRNPU-205ENST00000444376 ROCK2O75116 1388 aaKnown RBP20.68■□□□□ 0.9
HNRNPU-205ENST00000444376 PKD2Q13563 968 aa20.68■□□□□ 0.9
HNRNPU-205ENST00000444376 RALBP1Q15311 655 aa20.67■□□□□ 0.9
HNRNPU-205ENST00000444376 FOXD1Q16676 465 aa20.67■□□□□ 0.9
HNRNPU-205ENST00000444376 GZF1Q9H116 711 aaPredicted RBP20.66■□□□□ 0.9
HNRNPU-205ENST00000444376 CALD1Q05682 793 aaKnown RBP20.64■□□□□ 0.9
HNRNPU-205ENST00000444376 STK26Q9P289 416 aa20.64■□□□□ 0.9
HNRNPU-205ENST00000444376 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
HNRNPU-205ENST00000444376 CLSTN1O94985 981 aa20.64■□□□□ 0.89
HNRNPU-205ENST00000444376 SLKQ9H2G2 1235 aaPredicted RBP20.64■□□□□ 0.89
HNRNPU-205ENST00000444376 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
HNRNPU-205ENST00000444376 KIAA2012Q0VF49 1180 aa20.62■□□□□ 0.89
HNRNPU-205ENST00000444376 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
HNRNPU-205ENST00000444376 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.892e-8■■■□□ 17.8
HNRNPU-205ENST00000444376 MLECQ14165 292 aa20.61■□□□□ 0.89
HNRNPU-205ENST00000444376 SYAP1Q96A49 352 aaPredicted RBP20.59■□□□□ 0.89
HNRNPU-205ENST00000444376 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
HNRNPU-205ENST00000444376 MFAP1P55081 439 aaKnown RBP20.59■□□□□ 0.89
HNRNPU-205ENST00000444376 ISY1Q9ULR0 285 aaKnown RBP20.58■□□□□ 0.89
HNRNPU-205ENST00000444376 MPHOSPH9Q99550 1183 aa20.58■□□□□ 0.88
HNRNPU-205ENST00000444376 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.88
HNRNPU-205ENST00000444376 HTATSF1O43719 755 aaKnown RBP20.58■□□□□ 0.88
HNRNPU-205ENST00000444376 GOLGA6L3A6NEY3 463 aa20.56■□□□□ 0.88
HNRNPU-205ENST00000444376 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
HNRNPU-205ENST00000444376 IPO9Q96P70 1041 aaKnown RBP20.55■□□□□ 0.88
HNRNPU-205ENST00000444376 GGT6Q6P531 493 aa20.55■□□□□ 0.88
HNRNPU-205ENST00000444376 EIF3AQ14152 1382 aaKnown RBP20.54■□□□□ 0.88
HNRNPU-205ENST00000444376 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
HNRNPU-205ENST00000444376 TPM4P67936 248 aa20.52■□□□□ 0.88
HNRNPU-205ENST00000444376 ARID3AQ99856 593 aa20.52■□□□□ 0.88
HNRNPU-205ENST00000444376 SMC4Q9NTJ3 1288 aa20.52■□□□□ 0.88
HNRNPU-205ENST00000444376 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
HNRNPU-205ENST00000444376 NUP155O75694 1391 aa20.5■□□□□ 0.87
HNRNPU-205ENST00000444376 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
HNRNPU-205ENST00000444376 GPATCH3Q96I76 525 aa20.5■□□□□ 0.87
HNRNPU-205ENST00000444376 TRIM6-TRIM34B2RNG4 842 aa20.49■□□□□ 0.87
HNRNPU-205ENST00000444376 HSP90B1P14625 803 aaKnown RBP20.49■□□□□ 0.87
HNRNPU-205ENST00000444376 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
HNRNPU-205ENST00000444376 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
HNRNPU-205ENST00000444376 STK31Q9BXU1 1019 aa20.48■□□□□ 0.87
HNRNPU-205ENST00000444376 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
HNRNPU-205ENST00000444376 SPAG9O60271 1321 aaKnown RBP20.48■□□□□ 0.87
HNRNPU-205ENST00000444376 CSPP1Q1MSJ5 1256 aa20.47■□□□□ 0.87
HNRNPU-205ENST00000444376 NOC3LQ8WTT2 800 aaKnown RBP20.46■□□□□ 0.87
HNRNPU-205ENST00000444376 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
HNRNPU-205ENST00000444376 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.45■□□□□ 0.86
HNRNPU-205ENST00000444376 HMMRO75330 724 aa20.45■□□□□ 0.86
HNRNPU-205ENST00000444376 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
HNRNPU-205ENST00000444376 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
HNRNPU-205ENST00000444376 CENPJQ9HC77 1338 aaPredicted RBP20.44■□□□□ 0.86
HNRNPU-205ENST00000444376 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
HNRNPU-205ENST00000444376 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
HNRNPU-205ENST00000444376 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
HNRNPU-205ENST00000444376 GORABQ5T7V8 394 aa20.43■□□□□ 0.86
HNRNPU-205ENST00000444376 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
HNRNPU-205ENST00000444376 CHMP4AQ9BY43 222 aa20.42■□□□□ 0.86
HNRNPU-205ENST00000444376 CHMP3Q9Y3E7 222 aa20.41■□□□□ 0.86
HNRNPU-205ENST00000444376 CLUAP1Q96AJ1 413 aa20.41■□□□□ 0.86
HNRNPU-205ENST00000444376 NOL8Q76FK4 1167 aaKnown RBP20.41■□□□□ 0.86
HNRNPU-205ENST00000444376 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
HNRNPU-205ENST00000444376 SLC4A10Q6U841 1118 aa20.4■□□□□ 0.86
HNRNPU-205ENST00000444376 TERF2IPQ9NYB0 399 aa20.39■□□□□ 0.85
HNRNPU-205ENST00000444376 NLRP13Q86W25 1043 aa20.39■□□□□ 0.85
HNRNPU-205ENST00000444376 L3MBTL2Q969R5 705 aa20.37■□□□□ 0.85
HNRNPU-205ENST00000444376 PHF14O94880 888 aa20.37■□□□□ 0.85
HNRNPU-205ENST00000444376 TAF7LQ5H9L4 462 aa20.37■□□□□ 0.85
HNRNPU-205ENST00000444376 HDAC5Q9UQL6 1122 aa20.37■□□□□ 0.85
HNRNPU-205ENST00000444376 PHLDB1Q86UU1 1377 aa20.37■□□□□ 0.85
HNRNPU-205ENST00000444376 CCDC34Q96HJ3 373 aa20.37■□□□□ 0.85
HNRNPU-205ENST00000444376 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
HNRNPU-205ENST00000444376 ST18O60284 1047 aa20.36■□□□□ 0.85
HNRNPU-205ENST00000444376 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
HNRNPU-205ENST00000444376 GOLGA6L1Q8N7Z2 621 aa20.34■□□□□ 0.85
HNRNPU-205ENST00000444376 DDX11L8A8MPP1 907 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms