RNA–Protein interactions for RNA: ENST00000444288.1

MED28P3-201, Transcript of mediator complex subunit 28 pseudogene 3, humanhuman

BASIC

Gene MED28P3, Length 531 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P3-201ENST00000444288 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
MED28P3-201ENST00000444288 CEP162Q5TB80 1403 aa8.7□□□□□ -1.02
MED28P3-201ENST00000444288 GOLGA2Q08379 1002 aa8.69□□□□□ -1.02
MED28P3-201ENST00000444288 PDCD7Q8N8D1 485 aaKnown RBP8.69□□□□□ -1.02
MED28P3-201ENST00000444288 SLAIN1Q8ND83 568 aa8.69□□□□□ -1.02
MED28P3-201ENST00000444288 PDAP1Q13442 181 aaKnown RBP8.68□□□□□ -1.02
MED28P3-201ENST00000444288 CABP2Q9NPB3 220 aa8.68□□□□□ -1.02
MED28P3-201ENST00000444288 CCDC88BA6NC98 1476 aa8.67□□□□□ -1.02
MED28P3-201ENST00000444288 WDR62O43379 1518 aa8.67□□□□□ -1.02
MED28P3-201ENST00000444288 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
MED28P3-201ENST00000444288 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
MED28P3-201ENST00000444288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.66□□□□□ -1.02
MED28P3-201ENST00000444288 GOLGA3Q08378 1498 aa8.65□□□□□ -1.02
MED28P3-201ENST00000444288 DPY19L2Q6NUT2 758 aa8.65□□□□□ -1.02
MED28P3-201ENST00000444288 FAM9AQ8IZU1 332 aaPredicted RBP8.64□□□□□ -1.03
MED28P3-201ENST00000444288 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
MED28P3-201ENST00000444288 TNIKQ9UKE5 1360 aa8.63□□□□□ -1.03
MED28P3-201ENST00000444288 SYNJ1O43426 1573 aa8.62□□□□□ -1.03
MED28P3-201ENST00000444288 ARHGEF11O15085 1522 aa8.59□□□□□ -1.03
MED28P3-201ENST00000444288 MRC2Q9UBG0 1479 aa8.59□□□□□ -1.03
MED28P3-201ENST00000444288 BIVM-ERCC5R4GMW8 1640 aa8.59□□□□□ -1.03
MED28P3-201ENST00000444288 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
MED28P3-201ENST00000444288 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
MED28P3-201ENST00000444288 PDS5BQ9NTI5 1447 aa8.58□□□□□ -1.04
MED28P3-201ENST00000444288 ST18O60284 1047 aa8.58□□□□□ -1.04
MED28P3-201ENST00000444288 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
MED28P3-201ENST00000444288 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
MED28P3-201ENST00000444288 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
MED28P3-201ENST00000444288 SOGA1O94964 1423 aa8.56□□□□□ -1.04
MED28P3-201ENST00000444288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.56□□□□□ -1.04
MED28P3-201ENST00000444288 C3orf67Q6ZVT6 689 aa8.56□□□□□ -1.04
MED28P3-201ENST00000444288 ZFP91Q96JP5 570 aaPredicted RBP8.56□□□□□ -1.04
MED28P3-201ENST00000444288 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
MED28P3-201ENST00000444288 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
MED28P3-201ENST00000444288 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
MED28P3-201ENST00000444288 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
MED28P3-201ENST00000444288 L3MBTL3Q96JM7 780 aaPredicted RBP8.53□□□□□ -1.04
MED28P3-201ENST00000444288 TOP2BQ02880 1626 aa8.53□□□□□ -1.04
MED28P3-201ENST00000444288 RUSC2Q8N2Y8 1516 aa8.53□□□□□ -1.04
MED28P3-201ENST00000444288 FANCD2Q9BXW9 1451 aa8.52□□□□□ -1.05
MED28P3-201ENST00000444288 CENPBP07199 599 aaPredicted RBP8.52□□□□□ -1.05
MED28P3-201ENST00000444288 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
MED28P3-201ENST00000444288 MARVELD3Q96A59 401 aa8.52□□□□□ -1.05
MED28P3-201ENST00000444288 ERICH3Q5RHP9 1530 aa8.52□□□□□ -1.05
MED28P3-201ENST00000444288 CFTRP13569 1480 aa8.51□□□□□ -1.05
MED28P3-201ENST00000444288 VPS8Q8N3P4 1428 aa8.51□□□□□ -1.05
MED28P3-201ENST00000444288 BOLA1Q9Y3E2 137 aa8.5□□□□□ -1.05
MED28P3-201ENST00000444288 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
MED28P3-201ENST00000444288 DIEXFQ68CQ4 756 aaKnown RBP8.48□□□□□ -1.05
MED28P3-201ENST00000444288 PHF8Q9UPP1 1060 aa8.48□□□□□ -1.05
MED28P3-201ENST00000444288 ARAP1Q96P48 1450 aa8.48□□□□□ -1.05
MED28P3-201ENST00000444288 URB2Q14146 1524 aaKnown RBP8.48□□□□□ -1.05
MED28P3-201ENST00000444288 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
MED28P3-201ENST00000444288 MYT1Q01538 1121 aa8.47□□□□□ -1.05
MED28P3-201ENST00000444288 PKD2Q13563 968 aa8.47□□□□□ -1.05
MED28P3-201ENST00000444288 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
MED28P3-201ENST00000444288 MS4A4AQ96JQ5 239 aa8.47□□□□□ -1.05
MED28P3-201ENST00000444288 CLIP1P30622 1438 aa8.46□□□□□ -1.05
MED28P3-201ENST00000444288 G3V3G9 751 aa8.46□□□□□ -1.06
MED28P3-201ENST00000444288 BCL11BQ9C0K0 894 aaPredicted RBP8.46□□□□□ -1.06
MED28P3-201ENST00000444288 RGL2O15211 777 aa8.45□□□□□ -1.06
MED28P3-201ENST00000444288 STK24Q9Y6E0 443 aa8.44□□□□□ -1.06
MED28P3-201ENST00000444288 SNPHO15079 494 aa8.42□□□□□ -1.06
MED28P3-201ENST00000444288 TMEM92Q6UXU6 159 aa8.42□□□□□ -1.06
MED28P3-201ENST00000444288 MICALL2Q8IY33 904 aa8.42□□□□□ -1.06
MED28P3-201ENST00000444288 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
MED28P3-201ENST00000444288 RAPGEF2Q9Y4G8 1499 aa8.42□□□□□ -1.06
MED28P3-201ENST00000444288 CFAP43Q8NDM7 1665 aa8.42□□□□□ -1.06
MED28P3-201ENST00000444288 CHD1O14646 1710 aa8.41□□□□□ -1.06
MED28P3-201ENST00000444288 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
MED28P3-201ENST00000444288 STK25O00506 426 aa8.41□□□□□ -1.06
MED28P3-201ENST00000444288 HOXB3P14651 431 aaPredicted RBP8.4□□□□□ -1.06
MED28P3-201ENST00000444288 TMEM121BQ9BXQ6 578 aaPredicted RBP8.4□□□□□ -1.06
MED28P3-201ENST00000444288 SOX12O15370 315 aa8.39□□□□□ -1.07
MED28P3-201ENST00000444288 EMP3P54852 163 aa8.39□□□□□ -1.07
MED28P3-201ENST00000444288 PCDH10Q9P2E7 1040 aa8.39□□□□□ -1.07
MED28P3-201ENST00000444288 TOPBP1Q92547 1522 aa8.39□□□□□ -1.07
MED28P3-201ENST00000444288 POTEB3A0JP26 581 aa8.38□□□□□ -1.07
MED28P3-201ENST00000444288 POTEBQ6S5H4 581 aa8.38□□□□□ -1.07
MED28P3-201ENST00000444288 ZNF608Q9ULD9 1512 aaPredicted RBP8.38□□□□□ -1.07
MED28P3-201ENST00000444288 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
MED28P3-201ENST00000444288 CYB5RLQ6IPT4 315 aa8.37□□□□□ -1.07
MED28P3-201ENST00000444288 MFRPQ9BY79 579 aa8.37□□□□□ -1.07
MED28P3-201ENST00000444288 DNMBPQ6XZF7 1577 aa8.36□□□□□ -1.07
MED28P3-201ENST00000444288 FAM205CA6NFA0 338 aa8.36□□□□□ -1.07
MED28P3-201ENST00000444288 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
MED28P3-201ENST00000444288 RRBP1Q9P2E9 1410 aaKnown RBP8.36□□□□□ -1.07
MED28P3-201ENST00000444288 CLSPNQ9HAW4 1339 aa8.35□□□□□ -1.07
MED28P3-201ENST00000444288 EIF4G3O43432 1585 aaKnown RBP8.34□□□□□ -1.07
MED28P3-201ENST00000444288 CUX1P39880 1505 aa8.34□□□□□ -1.08
MED28P3-201ENST00000444288 NLRP6P59044 892 aa8.33□□□□□ -1.08
MED28P3-201ENST00000444288 IFT140Q96RY7 1462 aa8.32□□□□□ -1.08
MED28P3-201ENST00000444288 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
MED28P3-201ENST00000444288 TIAM1Q13009 1591 aa8.32□□□□□ -1.08
MED28P3-201ENST00000444288 HS3ST6Q96QI5 342 aa8.32□□□□□ -1.08
MED28P3-201ENST00000444288 MAP3K1Q13233 1512 aa8.32□□□□□ -1.08
MED28P3-201ENST00000444288 DHX57Q6P158 1386 aaKnown RBP8.32□□□□□ -1.08
MED28P3-201ENST00000444288 TARBP1Q13395 1621 aaKnown RBP8.32□□□□□ -1.08
MED28P3-201ENST00000444288 UBTFP17480 764 aaKnown RBP8.31□□□□□ -1.08
MED28P3-201ENST00000444288 ZNF710Q8N1W2 664 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms