RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 PPP1R15AO75807 674 aaPredicted RBP20.98■□□□□ 0.95
CHFR-204ENST00000443047 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
CHFR-204ENST00000443047 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.96■□□□□ 0.95
CHFR-204ENST00000443047 FOXD1Q16676 465 aa20.95■□□□□ 0.94
CHFR-204ENST00000443047 UACAQ9BZF9 1416 aa20.94■□□□□ 0.94
CHFR-204ENST00000443047 KIAA0556O60303 1618 aa20.94■□□□□ 0.94
CHFR-204ENST00000443047 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
CHFR-204ENST00000443047 PAK3O75914 559 aaPredicted RBP20.92■□□□□ 0.94
CHFR-204ENST00000443047 NUP153P49790 1475 aaKnown RBP20.92■□□□□ 0.94
CHFR-204ENST00000443047 HNRNPUQ00839 825 aaKnown RBP eCLIP20.91■□□□□ 0.94
CHFR-204ENST00000443047 IL27Q8NEV9 243 aa20.91■□□□□ 0.94
CHFR-204ENST00000443047 NOP58Q9Y2X3 529 aaKnown RBP20.91■□□□□ 0.94
CHFR-204ENST00000443047 KDM6BO15054 1643 aa20.91■□□□□ 0.94
CHFR-204ENST00000443047 PLB1Q6P1J6 1458 aa20.89■□□□□ 0.94
CHFR-204ENST00000443047 CEP170Q5SW79 1584 aa20.89■□□□□ 0.93
CHFR-204ENST00000443047 JPH4Q96JJ6 628 aa20.88■□□□□ 0.93
CHFR-204ENST00000443047 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
CHFR-204ENST00000443047 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
CHFR-204ENST00000443047 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
CHFR-204ENST00000443047 TCOF1Q13428 1488 aaKnown RBP20.86■□□□□ 0.93
CHFR-204ENST00000443047 RTL5Q5HYW3 569 aaPredicted RBP20.85■□□□□ 0.93
CHFR-204ENST00000443047 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
CHFR-204ENST00000443047 CCER2I3L3R5 266 aa20.84■□□□□ 0.93
CHFR-204ENST00000443047 TIMELESSQ9UNS1 1208 aa20.84■□□□□ 0.93
CHFR-204ENST00000443047 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
CHFR-204ENST00000443047 RAPGEF6Q8TEU7 1601 aa20.83■□□□□ 0.92
CHFR-204ENST00000443047 DENND4BO75064 1496 aaPredicted RBP20.81■□□□□ 0.92
CHFR-204ENST00000443047 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
CHFR-204ENST00000443047 ERICH6BQ5W0A0 696 aa20.8■□□□□ 0.92
CHFR-204ENST00000443047 MIA2Q96PC5 1412 aa20.8■□□□□ 0.92
CHFR-204ENST00000443047 PPP4R2Q9NY27 417 aa20.78■□□□□ 0.92
CHFR-204ENST00000443047 CFDP1Q9UEE9 299 aaPredicted RBP20.78■□□□□ 0.92
CHFR-204ENST00000443047 DAPK1P53355 1430 aa20.77■□□□□ 0.92
CHFR-204ENST00000443047 ABCC5O15440 1437 aa20.76■□□□□ 0.91
CHFR-204ENST00000443047 GCC2Q8IWJ2 1684 aa20.72■□□□□ 0.91
CHFR-204ENST00000443047 NUP160Q12769 1436 aa20.72■□□□□ 0.91
CHFR-204ENST00000443047 TROQ12816 1431 aaPredicted RBP20.71■□□□□ 0.91
CHFR-204ENST00000443047 CARMIL2Q6F5E8 1435 aa20.71■□□□□ 0.91
CHFR-204ENST00000443047 KIF14Q15058 1648 aa20.71■□□□□ 0.91
CHFR-204ENST00000443047 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
CHFR-204ENST00000443047 L3MBTL2Q969R5 705 aa20.7■□□□□ 0.9
CHFR-204ENST00000443047 SLC4A1APQ9BWU0 796 aaKnown RBP20.69■□□□□ 0.9
CHFR-204ENST00000443047 EIF5BO60841 1220 aaKnown RBP20.69■□□□□ 0.9
CHFR-204ENST00000443047 ZBTB47Q9UFB7 747 aaPredicted RBP20.67■□□□□ 0.9
CHFR-204ENST00000443047 PLEKHD1A6NEE1 506 aa20.66■□□□□ 0.9
CHFR-204ENST00000443047 GPATCH8Q9UKJ3 1502 aaKnown RBP20.66■□□□□ 0.9
CHFR-204ENST00000443047 CAMSAP2Q08AD1 1489 aa20.66■□□□□ 0.9
CHFR-204ENST00000443047 AKNAQ7Z591 1439 aa20.65■□□□□ 0.9
CHFR-204ENST00000443047 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
CHFR-204ENST00000443047 ANP32AP39687 249 aaKnown RBP20.65■□□□□ 0.9
CHFR-204ENST00000443047 DNMT1P26358 1616 aaKnown RBP20.65■□□□□ 0.9
CHFR-204ENST00000443047 UBE2Q2Q8WVN8 375 aa20.63■□□□□ 0.89
CHFR-204ENST00000443047 ATP10BO94823 1461 aa20.61■□□□□ 0.89
CHFR-204ENST00000443047 ROCK1Q13464 1354 aa20.61■□□□□ 0.89
CHFR-204ENST00000443047 NBPF8Q3BBV2 869 aa20.6■□□□□ 0.89
CHFR-204ENST00000443047 IPO9Q96P70 1041 aaKnown RBP20.59■□□□□ 0.89
CHFR-204ENST00000443047 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.89
CHFR-204ENST00000443047 HNRNPMP52272 730 aaKnown RBP eCLIP20.58■□□□□ 0.88
CHFR-204ENST00000443047 NCOA1Q15788 1441 aa20.57■□□□□ 0.88
CHFR-204ENST00000443047 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
CHFR-204ENST00000443047 PTPRGP23470 1445 aa20.56■□□□□ 0.88
CHFR-204ENST00000443047 ZNF326Q5BKZ1 582 aaKnown RBP20.55■□□□□ 0.88
CHFR-204ENST00000443047 NPM2Q86SE8 214 aaKnown RBP20.55■□□□□ 0.88
CHFR-204ENST00000443047 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
CHFR-204ENST00000443047 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
CHFR-204ENST00000443047 C11orf95C9JLR9 678 aaPredicted RBP20.55■□□□□ 0.88
CHFR-204ENST00000443047 ABCA8O94911 1581 aa20.54■□□□□ 0.88
CHFR-204ENST00000443047 EIF4G2P78344 907 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHFR-204ENST00000443047 PKD2Q13563 968 aa20.53■□□□□ 0.88
CHFR-204ENST00000443047 PZPP20742 1482 aa20.51■□□□□ 0.87
CHFR-204ENST00000443047 NEFMP07197 916 aa20.5■□□□□ 0.87
CHFR-204ENST00000443047 ITSN2Q9NZM3 1697 aa20.5■□□□□ 0.87
CHFR-204ENST00000443047 RPRD2Q5VT52 1461 aaKnown RBP20.48■□□□□ 0.87
CHFR-204ENST00000443047 CNGB1Q14028 1251 aaPredicted RBP20.48■□□□□ 0.87
CHFR-204ENST00000443047 CCDC184Q52MB2 194 aa20.48■□□□□ 0.87
CHFR-204ENST00000443047 ABCC10Q5T3U5 1492 aa20.48■□□□□ 0.87
CHFR-204ENST00000443047 ANKRD30AQ9BXX3 1397 aa20.47■□□□□ 0.87
CHFR-204ENST00000443047 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
CHFR-204ENST00000443047 ADCY10Q96PN6 1610 aa20.47■□□□□ 0.87
CHFR-204ENST00000443047 CHD1O14646 1710 aa20.47■□□□□ 0.87
CHFR-204ENST00000443047 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
CHFR-204ENST00000443047 TSPY4P0CV99 314 aa20.46■□□□□ 0.87
CHFR-204ENST00000443047 TSPY10P0CW01 314 aa20.46■□□□□ 0.87
CHFR-204ENST00000443047 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
CHFR-204ENST00000443047 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
CHFR-204ENST00000443047 BRPF3Q9ULD4 1205 aa20.44■□□□□ 0.86
CHFR-204ENST00000443047 NUP155O75694 1391 aa20.44■□□□□ 0.86
CHFR-204ENST00000443047 C9orf84Q5VXU9 1444 aa20.44■□□□□ 0.86
CHFR-204ENST00000443047 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
CHFR-204ENST00000443047 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
CHFR-204ENST00000443047 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
CHFR-204ENST00000443047 ADGRL2O95490 1459 aa20.39■□□□□ 0.86
CHFR-204ENST00000443047 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.86
CHFR-204ENST00000443047 KDM2AQ9Y2K7 1162 aa20.39■□□□□ 0.85
CHFR-204ENST00000443047 KIAA1107Q9UPP5 1409 aa20.38■□□□□ 0.85
CHFR-204ENST00000443047 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
CHFR-204ENST00000443047 MRS2Q9HD23 443 aa20.36■□□□□ 0.85
CHFR-204ENST00000443047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.854e-7■□□□□ 9.3
CHFR-204ENST00000443047 CCDC7Q96M83 1385 aa20.35■□□□□ 0.85
CHFR-204ENST00000443047 KIF7Q2M1P5 1343 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms