RNA–Protein interactions for RNA: ENST00000443035.7

DENND4A-202, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene DENND4A, Length 8,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-202ENST00000443035 MED1Q15648 1581 aaPredicted RBP3.95□□□□□ -1.78
DENND4A-202ENST00000443035 GIGYF1O75420 1035 aaPredicted RBP3.94□□□□□ -1.78
DENND4A-202ENST00000443035 SOGA1O94964 1423 aa3.94□□□□□ -1.78
DENND4A-202ENST00000443035 PRG4Q92954 1404 aaPredicted RBP3.94□□□□□ -1.78
DENND4A-202ENST00000443035 CHGAP10645 457 aaKnown RBP3.94□□□□□ -1.78
DENND4A-202ENST00000443035 AFAP1Q8N556 730 aa3.93□□□□□ -1.78
DENND4A-202ENST00000443035 POTEIP0CG38 1075 aa3.93□□□□□ -1.78
DENND4A-202ENST00000443035 POTEJP0CG39 1038 aa3.93□□□□□ -1.78
DENND4A-202ENST00000443035 CCDC88BA6NC98 1476 aa3.93□□□□□ -1.78
DENND4A-202ENST00000443035 HSPA1AP0DMV8 641 aaKnown RBP3.93□□□□□ -1.78
DENND4A-202ENST00000443035 HSPA1BP0DMV9 641 aaKnown RBP3.93□□□□□ -1.78
DENND4A-202ENST00000443035 ACSBG1Q96GR2 724 aa3.93□□□□□ -1.78
DENND4A-202ENST00000443035 YBX3P16989 372 aaKnown RBP eCLIP3.92□□□□□ -1.78
DENND4A-202ENST00000443035 FAM161BQ96MY7 647 aa3.92□□□□□ -1.78
DENND4A-202ENST00000443035 FAM98CQ17RN3 349 aaKnown RBP3.92□□□□□ -1.78
DENND4A-202ENST00000443035 CCDC24Q8N4L8 307 aa3.92□□□□□ -1.78
DENND4A-202ENST00000443035 CENPFP49454 3210 aa3.91□□□□□ -1.78
DENND4A-202ENST00000443035 HOXB3P14651 431 aaPredicted RBP3.91□□□□□ -1.78
DENND4A-202ENST00000443035 LMOD2Q6P5Q4 547 aa3.91□□□□□ -1.78
DENND4A-202ENST00000443035 SCAF8Q9UPN6 1271 aaKnown RBP3.91□□□□□ -1.78
DENND4A-202ENST00000443035 ATAD2BQ9ULI0 1458 aa3.91□□□□□ -1.78
DENND4A-202ENST00000443035 PYCARD-AS1I3L0S3 204 aa3.91□□□□□ -1.78
DENND4A-202ENST00000443035 KRT37O76014 449 aa3.91□□□□□ -1.78
DENND4A-202ENST00000443035 MRC2Q9UBG0 1479 aa3.9□□□□□ -1.78
DENND4A-202ENST00000443035 MSH5O43196 834 aa3.9□□□□□ -1.78
DENND4A-202ENST00000443035 GPR162Q16538 588 aa3.89□□□□□ -1.79
DENND4A-202ENST00000443035 BAZ1AQ9NRL2 1556 aaPredicted RBP3.89□□□□□ -1.79
DENND4A-202ENST00000443035 FANCD2Q9BXW9 1451 aa3.89□□□□□ -1.79
DENND4A-202ENST00000443035 LRP6O75581 1613 aa3.89□□□□□ -1.79
DENND4A-202ENST00000443035 APBA3O96018 575 aa3.89□□□□□ -1.79
DENND4A-202ENST00000443035 RRAGCQ9HB90 399 aa3.89□□□□□ -1.79
DENND4A-202ENST00000443035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.89□□□□□ -1.791e-6■■■■■ 28.4
DENND4A-202ENST00000443035 HNRNPMP52272 730 aaKnown RBP eCLIP3.89□□□□□ -1.79
DENND4A-202ENST00000443035 USP21Q9UK80 565 aa3.89□□□□□ -1.79
DENND4A-202ENST00000443035 CADPSQ9ULU8 1353 aa3.88□□□□□ -1.79
DENND4A-202ENST00000443035 CHRNA2Q15822 529 aa3.88□□□□□ -1.79
DENND4A-202ENST00000443035 PRELPP51888 382 aa3.88□□□□□ -1.79
DENND4A-202ENST00000443035 BAZ1BQ9UIG0 1483 aaKnown RBP3.87□□□□□ -1.79
DENND4A-202ENST00000443035 ANKLE2Q86XL3 938 aa3.87□□□□□ -1.79
DENND4A-202ENST00000443035 UBTFP17480 764 aaKnown RBP3.87□□□□□ -1.79
DENND4A-202ENST00000443035 TOM1O60784 492 aa3.87□□□□□ -1.79
DENND4A-202ENST00000443035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.87□□□□□ -1.791e-6■■■□□ 15.2
DENND4A-202ENST00000443035 SMARCA4P51532 1647 aa3.87□□□□□ -1.79
DENND4A-202ENST00000443035 SOX12O15370 315 aa3.87□□□□□ -1.79
DENND4A-202ENST00000443035 LBX1P52954 281 aa3.86□□□□□ -1.79
DENND4A-202ENST00000443035 PROSER2Q86WR7 435 aaPredicted RBP3.86□□□□□ -1.79
DENND4A-202ENST00000443035 NGLY1Q96IV0 654 aa3.86□□□□□ -1.79
DENND4A-202ENST00000443035 FOXN1O15353 648 aa3.85□□□□□ -1.79
DENND4A-202ENST00000443035 TRPM4Q8TD43 1214 aa3.85□□□□□ -1.79
DENND4A-202ENST00000443035 C14orf37Q86TY3 774 aa3.84□□□□□ -1.79
DENND4A-202ENST00000443035 ZIC5Q96T25 663 aa3.84□□□□□ -1.79
DENND4A-202ENST00000443035 PHOX2BQ99453 314 aa3.84□□□□□ -1.79
DENND4A-202ENST00000443035 LTKP29376 864 aa3.84□□□□□ -1.79
DENND4A-202ENST00000443035 Q7L0L9 218 aa3.84□□□□□ -1.8
DENND4A-202ENST00000443035 UNC13AQ9UPW8 1703 aa3.83□□□□□ -1.8
DENND4A-202ENST00000443035 SAFB2Q14151 953 aaKnown RBP eCLIP3.83□□□□□ -1.87e-7■■■□□ 18
DENND4A-202ENST00000443035 ORAI2Q96SN7 254 aa3.83□□□□□ -1.8
DENND4A-202ENST00000443035 MKRN3Q13064 507 aaKnown RBP3.83□□□□□ -1.8
DENND4A-202ENST00000443035 AMIGO3Q86WK7 504 aa3.83□□□□□ -1.8
DENND4A-202ENST00000443035 BRCA2P51587 3418 aa3.83□□□□□ -1.8
DENND4A-202ENST00000443035 PHF14O94880 888 aa3.82□□□□□ -1.8
DENND4A-202ENST00000443035 ZNF827Q17R98 1081 aa3.82□□□□□ -1.8
DENND4A-202ENST00000443035 ZFHX4Q86UP3 3567 aa3.82□□□□□ -1.8
DENND4A-202ENST00000443035 VCANP13611 3396 aa3.82□□□□□ -1.8
DENND4A-202ENST00000443035 TOP2AP11388 1531 aaKnown RBP3.82□□□□□ -1.8
DENND4A-202ENST00000443035 LAMA3Q16787 3333 aa3.81□□□□□ -1.8
DENND4A-202ENST00000443035 FZD1Q9UP38 647 aa3.81□□□□□ -1.8
DENND4A-202ENST00000443035 ARP10275 920 aa3.81□□□□□ -1.8
DENND4A-202ENST00000443035 AOC2O75106 756 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 FAM86C2PA6NEL3 165 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 PIAS4Q8N2W9 510 aaPredicted RBP3.8□□□□□ -1.8
DENND4A-202ENST00000443035 DNAJC5GQ8N7S2 189 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 ZFHX3Q15911 3703 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 STRN4Q9NRL3 753 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 KCNQ2O43526 872 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 SEPT12Q8IYM1 358 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 KIF3CO14782 793 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 SYT17Q9BSW7 474 aa3.8□□□□□ -1.8
DENND4A-202ENST00000443035 SYNJ1O43426 1573 aa3.79□□□□□ -1.8
DENND4A-202ENST00000443035 THOC2Q8NI27 1593 aaKnown RBP3.79□□□□□ -1.8
DENND4A-202ENST00000443035 SOX1O00570 391 aaPredicted RBP3.79□□□□□ -1.8
DENND4A-202ENST00000443035 SYNE4Q8N205 404 aa3.79□□□□□ -1.8
DENND4A-202ENST00000443035 PPM1EQ8WY54 764 aa3.79□□□□□ -1.8
DENND4A-202ENST00000443035 ABCC10Q5T3U5 1492 aa3.79□□□□□ -1.8
DENND4A-202ENST00000443035 DENND4BO75064 1496 aaPredicted RBP3.78□□□□□ -1.8
DENND4A-202ENST00000443035 ALYREFQ86V81 257 aaKnown RBP3.78□□□□□ -1.8
DENND4A-202ENST00000443035 KANK4Q5T7N3 995 aaPredicted RBP3.78□□□□□ -1.8
DENND4A-202ENST00000443035 PAXIP1Q6ZW49 1069 aaPredicted RBP3.78□□□□□ -1.8
DENND4A-202ENST00000443035 ZNF644Q9H582 1327 aaPredicted RBP3.78□□□□□ -1.8
DENND4A-202ENST00000443035 LRCH3Q96II8 777 aa3.78□□□□□ -1.8
DENND4A-202ENST00000443035 TNS2Q63HR2 1409 aa3.78□□□□□ -1.81
DENND4A-202ENST00000443035 RASSF7Q02833 373 aa3.77□□□□□ -1.81
DENND4A-202ENST00000443035 CEP164Q9UPV0 1460 aa3.77□□□□□ -1.81
DENND4A-202ENST00000443035 ASXL2Q76L83 1435 aa3.77□□□□□ -1.81
DENND4A-202ENST00000443035 KRT10P13645 584 aa3.77□□□□□ -1.81
DENND4A-202ENST00000443035 ZEB1P37275 1124 aaPredicted RBP3.77□□□□□ -1.81
DENND4A-202ENST00000443035 MIA2Q96PC5 1412 aa3.76□□□□□ -1.81
DENND4A-202ENST00000443035 EEA1Q15075 1411 aa3.76□□□□□ -1.81
DENND4A-202ENST00000443035 PRDM6Q9NQX0 595 aa3.75□□□□□ -1.81
DENND4A-202ENST00000443035 SETD1AO15047 1707 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms