RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
LINC00299-202ENST00000442956 CDC42BPAQ5VT25 1732 aa21.56■■□□□ 1.04
LINC00299-202ENST00000442956 KCNH8Q96L42 1107 aa21.56■■□□□ 1.04
LINC00299-202ENST00000442956 DNMT1P26358 1616 aaKnown RBP21.55■■□□□ 1.04
LINC00299-202ENST00000442956 AKNAQ7Z591 1439 aa21.54■■□□□ 1.04
LINC00299-202ENST00000442956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.52■■□□□ 1.04
LINC00299-202ENST00000442956 TTC37Q6PGP7 1564 aa21.51■■□□□ 1.03
LINC00299-202ENST00000442956 ROCK1Q13464 1354 aa21.5■■□□□ 1.03
LINC00299-202ENST00000442956 PREX2Q70Z35 1606 aa21.48■■□□□ 1.03
LINC00299-202ENST00000442956 MAPKBP1O60336 1514 aa21.46■■□□□ 1.03
LINC00299-202ENST00000442956 WDR7Q9Y4E6 1490 aa21.45■■□□□ 1.03
LINC00299-202ENST00000442956 GCC2Q8IWJ2 1684 aa21.45■■□□□ 1.02
LINC00299-202ENST00000442956 ARHGAP5Q13017 1502 aa21.44■■□□□ 1.02
LINC00299-202ENST00000442956 CDC42BPBQ9Y5S2 1711 aa21.44■■□□□ 1.02
LINC00299-202ENST00000442956 HNRNPMP52272 730 aaKnown RBP eCLIP21.43■■□□□ 1.02
LINC00299-202ENST00000442956 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
LINC00299-202ENST00000442956 SAMD9LQ8IVG5 1584 aa21.42■■□□□ 1.02
LINC00299-202ENST00000442956 PLCH2O75038 1416 aa21.41■■□□□ 1.02
LINC00299-202ENST00000442956 NCOA1Q15788 1441 aa21.41■■□□□ 1.02
LINC00299-202ENST00000442956 ASXL2Q76L83 1435 aa21.41■■□□□ 1.02
LINC00299-202ENST00000442956 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
LINC00299-202ENST00000442956 MYO5CQ9NQX4 1742 aa21.39■■□□□ 1.02
LINC00299-202ENST00000442956 KDM6BO15054 1643 aa21.39■■□□□ 1.02
LINC00299-202ENST00000442956 ADGRL2O95490 1459 aa21.39■■□□□ 1.02
LINC00299-202ENST00000442956 CROCC2H7BZ55 1655 aa21.39■■□□□ 1.01
LINC00299-202ENST00000442956 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
LINC00299-202ENST00000442956 TSPY4P0CV99 314 aa21.38■■□□□ 1.01
LINC00299-202ENST00000442956 TSPY10P0CW01 314 aa21.38■■□□□ 1.01
LINC00299-202ENST00000442956 ARHGEF5Q12774 1597 aa21.38■■□□□ 1.01
LINC00299-202ENST00000442956 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
LINC00299-202ENST00000442956 ANKRD30AQ9BXX3 1397 aa21.38■■□□□ 1.01
LINC00299-202ENST00000442956 RSPH4AQ5TD94 716 aa21.36■■□□□ 1.01
LINC00299-202ENST00000442956 EFCAB2Q5VUJ9 269 aa21.36■■□□□ 1.01
LINC00299-202ENST00000442956 TRIM52Q96A61 297 aa21.36■■□□□ 1.01
LINC00299-202ENST00000442956 CCDC141Q6ZP82 1450 aa21.36■■□□□ 1.01
LINC00299-202ENST00000442956 ADGBQ8N7X0 1667 aa21.35■■□□□ 1.01
LINC00299-202ENST00000442956 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
LINC00299-202ENST00000442956 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
LINC00299-202ENST00000442956 KIAA1107Q9UPP5 1409 aa21.34■■□□□ 1.01
LINC00299-202ENST00000442956 ACIN1Q9UKV3 1341 aaKnown RBP21.32■■□□□ 1
LINC00299-202ENST00000442956 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
LINC00299-202ENST00000442956 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
LINC00299-202ENST00000442956 ARAP3Q8WWN8 1544 aa21.3■■□□□ 1
LINC00299-202ENST00000442956 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
LINC00299-202ENST00000442956 RIMBP3CA6NJZ7 1639 aa21.28■■□□□ 1
LINC00299-202ENST00000442956 RIMBP3BA6NNM3 1639 aa21.28■■□□□ 1
LINC00299-202ENST00000442956 RIMBP3Q9UFD9 1639 aa21.28■■□□□ 1
LINC00299-202ENST00000442956 ARHGEF12Q9NZN5 1544 aa21.28■■□□□ 1
LINC00299-202ENST00000442956 NEUROD1Q13562 356 aa21.28■■□□□ 1
LINC00299-202ENST00000442956 ANKRD50Q9ULJ7 1429 aa21.28■■□□□ 1
LINC00299-202ENST00000442956 MPHOSPH9Q99550 1183 aa21.27■□□□□ 0.99
LINC00299-202ENST00000442956 KIF15Q9NS87 1388 aa21.27■□□□□ 0.99
LINC00299-202ENST00000442956 ABCC1P33527 1531 aa21.25■□□□□ 0.99
LINC00299-202ENST00000442956 DENND4BO75064 1496 aaPredicted RBP21.24■□□□□ 0.99
LINC00299-202ENST00000442956 FANCAO15360 1455 aa21.23■□□□□ 0.99
LINC00299-202ENST00000442956 MAST1Q9Y2H9 1570 aa21.22■□□□□ 0.99
LINC00299-202ENST00000442956 TRAPPC8Q9Y2L5 1435 aa21.21■□□□□ 0.99
LINC00299-202ENST00000442956 SLC4A1APQ9BWU0 796 aaKnown RBP21.19■□□□□ 0.98
LINC00299-202ENST00000442956 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
LINC00299-202ENST00000442956 CD109Q6YHK3 1445 aa21.16■□□□□ 0.98
LINC00299-202ENST00000442956 PZPP20742 1482 aa21.16■□□□□ 0.98
LINC00299-202ENST00000442956 FOXD1Q16676 465 aa21.16■□□□□ 0.98
LINC00299-202ENST00000442956 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
LINC00299-202ENST00000442956 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
LINC00299-202ENST00000442956 ADGRL1O94910 1474 aa21.14■□□□□ 0.97
LINC00299-202ENST00000442956 PLXNC1O60486 1568 aa21.14■□□□□ 0.97
LINC00299-202ENST00000442956 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
LINC00299-202ENST00000442956 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
LINC00299-202ENST00000442956 NUP155O75694 1391 aa21.12■□□□□ 0.97
LINC00299-202ENST00000442956 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
LINC00299-202ENST00000442956 ANKRD30BQ9BXX2 1392 aa21.1■□□□□ 0.97
LINC00299-202ENST00000442956 RTEL1-TNFRSF6BF6WH68 1400 aa21.09■□□□□ 0.97
LINC00299-202ENST00000442956 DUOX2Q9NRD8 1548 aa21.08■□□□□ 0.97
LINC00299-202ENST00000442956 PKD2Q13563 968 aa21.07■□□□□ 0.96
LINC00299-202ENST00000442956 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
LINC00299-202ENST00000442956 KDM5DQ9BY66 1539 aa21.07■□□□□ 0.96
LINC00299-202ENST00000442956 PPP1R15AO75807 674 aaPredicted RBP21.06■□□□□ 0.96
LINC00299-202ENST00000442956 ERBINQ96RT1 1412 aa21.05■□□□□ 0.96
LINC00299-202ENST00000442956 CFAP74Q9C0B2 1584 aa21.03■□□□□ 0.96
LINC00299-202ENST00000442956 ATP7AQ04656 1500 aa21.02■□□□□ 0.96
LINC00299-202ENST00000442956 MYT1LQ9UL68 1186 aa21.01■□□□□ 0.95
LINC00299-202ENST00000442956 ZNF518AQ6AHZ1 1483 aa21.01■□□□□ 0.95
LINC00299-202ENST00000442956 INO80Q9ULG1 1556 aaPredicted RBP21.01■□□□□ 0.95
LINC00299-202ENST00000442956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21■□□□□ 0.95
LINC00299-202ENST00000442956 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
LINC00299-202ENST00000442956 NEO1Q92859 1461 aa20.99■□□□□ 0.95
LINC00299-202ENST00000442956 GLI2P10070 1586 aa20.99■□□□□ 0.95
LINC00299-202ENST00000442956 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
LINC00299-202ENST00000442956 UNC13BO14795 1591 aa20.99■□□□□ 0.95
LINC00299-202ENST00000442956 FAM69CQ0P6D2 419 aa20.99■□□□□ 0.95
LINC00299-202ENST00000442956 POGZQ7Z3K3 1410 aa20.98■□□□□ 0.95
LINC00299-202ENST00000442956 MAP3K4Q9Y6R4 1608 aa20.97■□□□□ 0.95
LINC00299-202ENST00000442956 DIEXFQ68CQ4 756 aaKnown RBP20.96■□□□□ 0.95
LINC00299-202ENST00000442956 L3MBTL2Q969R5 705 aa20.94■□□□□ 0.94
LINC00299-202ENST00000442956 MAGI2Q86UL8 1455 aa20.94■□□□□ 0.94
LINC00299-202ENST00000442956 DIP2BQ9P265 1576 aa20.94■□□□□ 0.94
LINC00299-202ENST00000442956 KDM5CP41229 1560 aa20.92■□□□□ 0.94
LINC00299-202ENST00000442956 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
LINC00299-202ENST00000442956 IQGAP3Q86VI3 1631 aa20.91■□□□□ 0.94
LINC00299-202ENST00000442956 RAPGEF3O95398 923 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms