RNA–Protein interactions for RNA: ENST00000442934.6

MSI2-204, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-204ENST00000442934 NAIPQ13075 1403 aa23.76■■□□□ 1.39
MSI2-204ENST00000442934 CROCC2H7BZ55 1655 aa23.75■■□□□ 1.39
MSI2-204ENST00000442934 ROCK1Q13464 1354 aa23.74■■□□□ 1.39
MSI2-204ENST00000442934 ADGBQ8N7X0 1667 aa23.72■■□□□ 1.39
MSI2-204ENST00000442934 ABCC5O15440 1437 aa23.72■■□□□ 1.39
MSI2-204ENST00000442934 MYO5CQ9NQX4 1742 aa23.71■■□□□ 1.39
MSI2-204ENST00000442934 CDC42BPBQ9Y5S2 1711 aa23.7■■□□□ 1.38
MSI2-204ENST00000442934 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.38
MSI2-204ENST00000442934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.69■■□□□ 1.38
MSI2-204ENST00000442934 TTC37Q6PGP7 1564 aa23.69■■□□□ 1.38
MSI2-204ENST00000442934 ARHGEF5Q12774 1597 aa23.67■■□□□ 1.38
MSI2-204ENST00000442934 SHANK2Q9UPX8 1470 aa23.66■■□□□ 1.38
MSI2-204ENST00000442934 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
MSI2-204ENST00000442934 MAPKBP1O60336 1514 aa23.66■■□□□ 1.38
MSI2-204ENST00000442934 ADGRL2O95490 1459 aa23.64■■□□□ 1.38
MSI2-204ENST00000442934 SAMD9LQ8IVG5 1584 aa23.62■■□□□ 1.37
MSI2-204ENST00000442934 WDR7Q9Y4E6 1490 aa23.6■■□□□ 1.37
MSI2-204ENST00000442934 ARAP3Q8WWN8 1544 aa23.6■■□□□ 1.37
MSI2-204ENST00000442934 PLEKHH2Q8IVE3 1493 aa23.6■■□□□ 1.37
MSI2-204ENST00000442934 CHIC2Q9UKJ5 165 aa23.59■■□□□ 1.37
MSI2-204ENST00000442934 ARHGAP5Q13017 1502 aa23.59■■□□□ 1.37
MSI2-204ENST00000442934 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
MSI2-204ENST00000442934 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
MSI2-204ENST00000442934 RSPH4AQ5TD94 716 aa23.55■■□□□ 1.36
MSI2-204ENST00000442934 MBD5Q9P267 1494 aa23.55■■□□□ 1.36
MSI2-204ENST00000442934 PLCH2O75038 1416 aa23.55■■□□□ 1.36
MSI2-204ENST00000442934 NCOA1Q15788 1441 aa23.55■■□□□ 1.36
MSI2-204ENST00000442934 KDM6BO15054 1643 aa23.54■■□□□ 1.36
MSI2-204ENST00000442934 CCDC141Q6ZP82 1450 aa23.54■■□□□ 1.36
MSI2-204ENST00000442934 ANKRD30AQ9BXX3 1397 aa23.54■■□□□ 1.36
MSI2-204ENST00000442934 KIAA1107Q9UPP5 1409 aa23.53■■□□□ 1.36
MSI2-204ENST00000442934 ABCA9Q8IUA7 1624 aa23.53■■□□□ 1.36
MSI2-204ENST00000442934 C9orf84Q5VXU9 1444 aa23.52■■□□□ 1.36
MSI2-204ENST00000442934 MAST1Q9Y2H9 1570 aa23.51■■□□□ 1.35
MSI2-204ENST00000442934 KCNH8Q96L42 1107 aa23.49■■□□□ 1.35
MSI2-204ENST00000442934 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
MSI2-204ENST00000442934 ASXL2Q76L83 1435 aa23.48■■□□□ 1.35
MSI2-204ENST00000442934 NPM1P06748 294 aaKnown RBP eCLIP23.47■■□□□ 1.35
MSI2-204ENST00000442934 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
MSI2-204ENST00000442934 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
MSI2-204ENST00000442934 TIMELESSQ9UNS1 1208 aa23.45■■□□□ 1.34
MSI2-204ENST00000442934 ABCC1P33527 1531 aa23.45■■□□□ 1.34
MSI2-204ENST00000442934 EFCAB2Q5VUJ9 269 aa23.44■■□□□ 1.34
MSI2-204ENST00000442934 PLXNC1O60486 1568 aa23.42■■□□□ 1.34
MSI2-204ENST00000442934 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.348e-7■■■■□ 19.8
MSI2-204ENST00000442934 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
MSI2-204ENST00000442934 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
MSI2-204ENST00000442934 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
MSI2-204ENST00000442934 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
MSI2-204ENST00000442934 TRIM52Q96A61 297 aa23.38■■□□□ 1.33
MSI2-204ENST00000442934 KIF15Q9NS87 1388 aa23.36■■□□□ 1.33
MSI2-204ENST00000442934 ARHGEF12Q9NZN5 1544 aa23.36■■□□□ 1.33
MSI2-204ENST00000442934 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
MSI2-204ENST00000442934 CFAP74Q9C0B2 1584 aa23.35■■□□□ 1.33
MSI2-204ENST00000442934 KDM5DQ9BY66 1539 aa23.34■■□□□ 1.33
MSI2-204ENST00000442934 FANCAO15360 1455 aa23.34■■□□□ 1.33
MSI2-204ENST00000442934 MPHOSPH9Q99550 1183 aa23.33■■□□□ 1.32
MSI2-204ENST00000442934 PZPP20742 1482 aa23.3■■□□□ 1.32
MSI2-204ENST00000442934 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
MSI2-204ENST00000442934 ZNF316A6NFI3 1004 aaPredicted RBP23.29■■□□□ 1.32
MSI2-204ENST00000442934 DUOX2Q9NRD8 1548 aa23.28■■□□□ 1.32
MSI2-204ENST00000442934 RTEL1-TNFRSF6BF6WH68 1400 aa23.28■■□□□ 1.32
MSI2-204ENST00000442934 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
MSI2-204ENST00000442934 UNC13BO14795 1591 aa23.25■■□□□ 1.31
MSI2-204ENST00000442934 TRAPPC8Q9Y2L5 1435 aa23.25■■□□□ 1.31
MSI2-204ENST00000442934 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
MSI2-204ENST00000442934 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
MSI2-204ENST00000442934 ERBINQ96RT1 1412 aa23.24■■□□□ 1.31
MSI2-204ENST00000442934 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
MSI2-204ENST00000442934 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
MSI2-204ENST00000442934 INO80Q9ULG1 1556 aaPredicted RBP23.23■■□□□ 1.31
MSI2-204ENST00000442934 CD109Q6YHK3 1445 aa23.22■■□□□ 1.31
MSI2-204ENST00000442934 ANKRD30BQ9BXX2 1392 aa23.21■■□□□ 1.31
MSI2-204ENST00000442934 GLI2P10070 1586 aa23.2■■□□□ 1.3
MSI2-204ENST00000442934 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
MSI2-204ENST00000442934 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
MSI2-204ENST00000442934 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
MSI2-204ENST00000442934 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
MSI2-204ENST00000442934 NUP155O75694 1391 aa23.17■■□□□ 1.3
MSI2-204ENST00000442934 MAP3K4Q9Y6R4 1608 aa23.17■■□□□ 1.3
MSI2-204ENST00000442934 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
MSI2-204ENST00000442934 MAGI2Q86UL8 1455 aa23.16■■□□□ 1.3
MSI2-204ENST00000442934 NEO1Q92859 1461 aa23.16■■□□□ 1.3
MSI2-204ENST00000442934 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
MSI2-204ENST00000442934 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
MSI2-204ENST00000442934 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
MSI2-204ENST00000442934 FAM135AQ9P2D6 1515 aa23.14■■□□□ 1.29
MSI2-204ENST00000442934 KDM5CP41229 1560 aa23.11■■□□□ 1.29
MSI2-204ENST00000442934 EIF2AK4Q9P2K8 1649 aaKnown RBP23.11■■□□□ 1.29
MSI2-204ENST00000442934 AFAP1Q8N556 730 aa23.1■■□□□ 1.29
MSI2-204ENST00000442934 PKD2Q13563 968 aa23.09■■□□□ 1.29
MSI2-204ENST00000442934 POGZQ7Z3K3 1410 aa23.08■■□□□ 1.29
MSI2-204ENST00000442934 DEPDC5O75140 1603 aa23.08■■□□□ 1.29
MSI2-204ENST00000442934 DIP2BQ9P265 1576 aa23.08■■□□□ 1.28
MSI2-204ENST00000442934 KIDINS220Q9ULH0 1771 aa23.07■■□□□ 1.28
MSI2-204ENST00000442934 FOXD1Q16676 465 aa23.07■■□□□ 1.28
MSI2-204ENST00000442934 DIEXFQ68CQ4 756 aaKnown RBP23.06■■□□□ 1.28
MSI2-204ENST00000442934 TEX14Q8IWB6 1497 aa23.05■■□□□ 1.28
MSI2-204ENST00000442934 MLH3Q9UHC1 1453 aa23.04■■□□□ 1.28
MSI2-204ENST00000442934 HECW2Q9P2P5 1572 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms