RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 MLECQ14165 292 aa34.01■■■■□ 3.03
TMEM50B-204ENST00000442441 FMN1Q68DA7 1419 aa33.99■■■■□ 3.03
TMEM50B-204ENST00000442441 ATP1B4Q9UN42 357 aaPredicted RBP33.99■■■■□ 3.03
TMEM50B-204ENST00000442441 UBTFP17480 764 aaKnown RBP33.97■■■■□ 3.03
TMEM50B-204ENST00000442441 EFCAB2Q5VUJ9 269 aa33.96■■■■□ 3.03
TMEM50B-204ENST00000442441 FER1L4A9Z1Z3 1794 aa33.95■■■■□ 3.03
TMEM50B-204ENST00000442441 CDK11AQ9UQ88 783 aaPredicted RBP33.95■■■■□ 3.03
TMEM50B-204ENST00000442441 ATP10AO60312 1499 aa33.95■■■■□ 3.02
TMEM50B-204ENST00000442441 EHMT2Q96KQ7 1210 aa33.94■■■■□ 3.02
TMEM50B-204ENST00000442441 MYO5CQ9NQX4 1742 aa33.93■■■■□ 3.02
TMEM50B-204ENST00000442441 ARHGAP35Q9NRY4 1499 aa33.91■■■■□ 3.02
TMEM50B-204ENST00000442441 C9orf84Q5VXU9 1444 aa33.9■■■■□ 3.02
TMEM50B-204ENST00000442441 ARHGEF12Q9NZN5 1544 aa33.89■■■■□ 3.02
TMEM50B-204ENST00000442441 KIF14Q15058 1648 aa33.86■■■■□ 3.01
TMEM50B-204ENST00000442441 TROQ12816 1431 aaPredicted RBP33.84■■■■□ 3.01
TMEM50B-204ENST00000442441 ZNF518AQ6AHZ1 1483 aa33.83■■■■□ 3.01
TMEM50B-204ENST00000442441 ARHGAP5Q13017 1502 aa33.8■■■■□ 3
TMEM50B-204ENST00000442441 CLIP1P30622 1438 aa33.79■■■■□ 3
TMEM50B-204ENST00000442441 AFAP1Q8N556 730 aa33.78■■■■□ 3
TMEM50B-204ENST00000442441 CERKQ8TCT0 537 aa33.78■■■■□ 3
TMEM50B-204ENST00000442441 KDM5CP41229 1560 aa33.77■■■■□ 3
TMEM50B-204ENST00000442441 CEBPAP49715 358 aaPredicted RBP33.76■■■□□ 2.99
TMEM50B-204ENST00000442441 PREX1Q8TCU6 1659 aa33.76■■■□□ 2.99
TMEM50B-204ENST00000442441 LRRIQ1Q96JM4 1722 aa33.71■■■□□ 2.99
TMEM50B-204ENST00000442441 MYT1LQ9UL68 1186 aa33.71■■■□□ 2.99
TMEM50B-204ENST00000442441 DIP2CQ9Y2E4 1556 aa33.68■■■□□ 2.98
TMEM50B-204ENST00000442441 CDC42BPBQ9Y5S2 1711 aa33.67■■■□□ 2.98
TMEM50B-204ENST00000442441 REREQ9P2R6 1566 aa33.66■■■□□ 2.98
TMEM50B-204ENST00000442441 CHIC1Q5VXU3 224 aa33.65■■■□□ 2.98
TMEM50B-204ENST00000442441 MLH3Q9UHC1 1453 aa33.64■■■□□ 2.98
TMEM50B-204ENST00000442441 UHRF1BP1Q6BDS2 1440 aa33.62■■■□□ 2.97
TMEM50B-204ENST00000442441 SETD1BQ9UPS6 1966 aaKnown RBP33.61■■■□□ 2.97
TMEM50B-204ENST00000442441 ABCA6Q8N139 1617 aa33.61■■■□□ 2.97
TMEM50B-204ENST00000442441 DMRT2Q9Y5R5 561 aa33.61■■■□□ 2.97
TMEM50B-204ENST00000442441 PREX2Q70Z35 1606 aa33.6■■■□□ 2.97
TMEM50B-204ENST00000442441 ABCC1P33527 1531 aa33.58■■■□□ 2.97
TMEM50B-204ENST00000442441 CCDC18Q5T9S5 1454 aa33.58■■■□□ 2.97
TMEM50B-204ENST00000442441 STRCQ7RTU9 1775 aa33.58■■■□□ 2.97
TMEM50B-204ENST00000442441 CASKIN1Q8WXD9 1431 aa33.58■■■□□ 2.97
TMEM50B-204ENST00000442441 TRAPPC8Q9Y2L5 1435 aa33.58■■■□□ 2.97
TMEM50B-204ENST00000442441 AGLP35573 1532 aa33.56■■■□□ 2.96
TMEM50B-204ENST00000442441 ITSN2Q9NZM3 1697 aa33.53■■■□□ 2.96
TMEM50B-204ENST00000442441 C3P01024 1663 aa33.52■■■□□ 2.96
TMEM50B-204ENST00000442441 ESF1Q9H501 851 aaKnown RBP33.52■■■□□ 2.96
TMEM50B-204ENST00000442441 KIDINS220Q9ULH0 1771 aa33.47■■■□□ 2.95
TMEM50B-204ENST00000442441 CDC42BPAQ5VT25 1732 aa33.46■■■□□ 2.95
TMEM50B-204ENST00000442441 PTPRTO14522 1441 aa33.43■■■□□ 2.94
TMEM50B-204ENST00000442441 CNTLNQ9NXG0 1405 aa33.42■■■□□ 2.94
TMEM50B-204ENST00000442441 FYCO1Q9BQS8 1478 aa33.42■■■□□ 2.94
TMEM50B-204ENST00000442441 SAMD9LQ8IVG5 1584 aa33.38■■■□□ 2.93
TMEM50B-204ENST00000442441 ZNF777Q9ULD5 760 aaPredicted RBP33.38■■■□□ 2.93
TMEM50B-204ENST00000442441 GPATCH8Q9UKJ3 1502 aaKnown RBP33.33■■■□□ 2.93
TMEM50B-204ENST00000442441 SYCP2Q9BX26 1530 aa33.33■■■□□ 2.93
TMEM50B-204ENST00000442441 SPAG9O60271 1321 aaKnown RBP33.32■■■□□ 2.93
TMEM50B-204ENST00000442441 NCOA1Q15788 1441 aa33.31■■■□□ 2.92
TMEM50B-204ENST00000442441 HNRNPMP52272 730 aaKnown RBP eCLIP33.3■■■□□ 2.92
TMEM50B-204ENST00000442441 NPATQ14207 1427 aa33.29■■■□□ 2.92
TMEM50B-204ENST00000442441 MROH2AA6NES4 1674 aa33.29■■■□□ 2.92
TMEM50B-204ENST00000442441 ZMYM3Q14202 1370 aa33.26■■■□□ 2.92
TMEM50B-204ENST00000442441 LTBP4Q8N2S1 1624 aa33.26■■■□□ 2.91
TMEM50B-204ENST00000442441 KIAA1107Q9UPP5 1409 aa33.25■■■□□ 2.91
TMEM50B-204ENST00000442441 SUPT6HQ7KZ85 1726 aaKnown RBP33.25■■■□□ 2.91
TMEM50B-204ENST00000442441 DISP3Q9P2K9 1392 aa33.24■■■□□ 2.91
TMEM50B-204ENST00000442441 ATP7AQ04656 1500 aa33.23■■■□□ 2.91
TMEM50B-204ENST00000442441 CFDP1Q9UEE9 299 aaPredicted RBP33.23■■■□□ 2.91
TMEM50B-204ENST00000442441 PLEKHH2Q8IVE3 1493 aa33.23■■■□□ 2.91
TMEM50B-204ENST00000442441 CAMSAP1Q5T5Y3 1602 aa33.21■■■□□ 2.91
TMEM50B-204ENST00000442441 CCNB3Q8WWL7 1395 aa33.2■■■□□ 2.9
TMEM50B-204ENST00000442441 PLXNC1O60486 1568 aa33.19■■■□□ 2.9
TMEM50B-204ENST00000442441 INO80Q9ULG1 1556 aaPredicted RBP33.19■■■□□ 2.9
TMEM50B-204ENST00000442441 IQSEC2Q5JU85 1478 aa33.18■■■□□ 2.9
TMEM50B-204ENST00000442441 A2MP01023 1474 aa33.18■■■□□ 2.9
TMEM50B-204ENST00000442441 CLTCQ00610 1675 aaKnown RBP33.16■■■□□ 2.9
TMEM50B-204ENST00000442441 ILDR2Q71H61 639 aa33.14■■■□□ 2.9
TMEM50B-204ENST00000442441 MTUS2Q5JR59 1369 aa33.13■■■□□ 2.89
TMEM50B-204ENST00000442441 NCKAP5LQ9HCH0 1330 aa33.12■■■□□ 2.89
TMEM50B-204ENST00000442441 GGT6Q6P531 493 aa33.11■■■□□ 2.89
TMEM50B-204ENST00000442441 PTPRKQ15262 1439 aa33.1■■■□□ 2.89
TMEM50B-204ENST00000442441 MYO3AQ8NEV4 1616 aa33.09■■■□□ 2.89
TMEM50B-204ENST00000442441 ZNF142P52746 1687 aaPredicted RBP33.08■■■□□ 2.89
TMEM50B-204ENST00000442441 PPP6R1Q9UPN7 881 aa33.07■■■□□ 2.88
TMEM50B-204ENST00000442441 PLA2R1Q13018 1463 aa33.06■■■□□ 2.88
TMEM50B-204ENST00000442441 ADGBQ8N7X0 1667 aa33.05■■■□□ 2.88
TMEM50B-204ENST00000442441 PKD2Q13563 968 aa33.05■■■□□ 2.88
TMEM50B-204ENST00000442441 CEP170BQ9Y4F5 1589 aaPredicted RBP33.04■■■□□ 2.88
TMEM50B-204ENST00000442441 SPATA31D1Q6ZQQ2 1576 aa33.04■■■□□ 2.88
TMEM50B-204ENST00000442441 ZNF335Q9H4Z2 1342 aaPredicted RBP33.03■■■□□ 2.88
TMEM50B-204ENST00000442441 ZNF644Q9H582 1327 aaPredicted RBP33.03■■■□□ 2.88
TMEM50B-204ENST00000442441 SOCS7O14512 581 aa33.02■■■□□ 2.88
TMEM50B-204ENST00000442441 TIAM1Q13009 1591 aa33.01■■■□□ 2.88
TMEM50B-204ENST00000442441 TCOF1Q13428 1488 aaKnown RBP33■■■□□ 2.87
TMEM50B-204ENST00000442441 MBD5Q9P267 1494 aa33■■■□□ 2.87
TMEM50B-204ENST00000442441 EHBP1L1Q8N3D4 1523 aa32.97■■■□□ 2.87
TMEM50B-204ENST00000442441 RTEL1-TNFRSF6BF6WH68 1400 aa32.97■■■□□ 2.87
TMEM50B-204ENST00000442441 CEP162Q5TB80 1403 aa32.94■■■□□ 2.86
TMEM50B-204ENST00000442441 UBAP1LF5GYI3 381 aa32.93■■■□□ 2.86
TMEM50B-204ENST00000442441 DHX29Q7Z478 1369 aaKnown RBP32.93■■■□□ 2.86
TMEM50B-204ENST00000442441 A2ML1A8K2U0 1454 aa32.92■■■□□ 2.86
TMEM50B-204ENST00000442441 DNMT1P26358 1616 aaKnown RBP32.88■■■□□ 2.85
TMEM50B-204ENST00000442441 KIF3BO15066 747 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms