RNA–Protein interactions for RNA: ENST00000442250.5

ITGA6-206, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-206ENST00000442250 PTPRKQ15262 1439 aa13.09□□□□□ -0.31
ITGA6-206ENST00000442250 POLR3GLQ9BT43 218 aa13.09□□□□□ -0.31
ITGA6-206ENST00000442250 NUP160Q12769 1436 aa13.08□□□□□ -0.31
ITGA6-206ENST00000442250 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
ITGA6-206ENST00000442250 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
ITGA6-206ENST00000442250 KIAA0556O60303 1618 aa13.08□□□□□ -0.32
ITGA6-206ENST00000442250 ERCC6L2Q5T890 1561 aa13.08□□□□□ -0.32
ITGA6-206ENST00000442250 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
ITGA6-206ENST00000442250 UGGT2Q9NYU1 1516 aa13.06□□□□□ -0.32
ITGA6-206ENST00000442250 NBR1Q14596 966 aa13.04□□□□□ -0.32
ITGA6-206ENST00000442250 HECW1Q76N89 1606 aa13.04□□□□□ -0.32
ITGA6-206ENST00000442250 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
ITGA6-206ENST00000442250 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
ITGA6-206ENST00000442250 CHD1O14646 1710 aa13.03□□□□□ -0.32
ITGA6-206ENST00000442250 DEKP35659 375 aaKnown RBP13.03□□□□□ -0.32
ITGA6-206ENST00000442250 ATP10BO94823 1461 aa13.02□□□□□ -0.33
ITGA6-206ENST00000442250 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
ITGA6-206ENST00000442250 TONSLQ96HA7 1378 aa13□□□□□ -0.33
ITGA6-206ENST00000442250 TROQ12816 1431 aaPredicted RBP13□□□□□ -0.33
ITGA6-206ENST00000442250 AFAP1Q8N556 730 aa13□□□□□ -0.33
ITGA6-206ENST00000442250 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
ITGA6-206ENST00000442250 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
ITGA6-206ENST00000442250 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
ITGA6-206ENST00000442250 RAPGEF6Q8TEU7 1601 aa12.99□□□□□ -0.33
ITGA6-206ENST00000442250 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
ITGA6-206ENST00000442250 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
ITGA6-206ENST00000442250 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
ITGA6-206ENST00000442250 SUPT6HQ7KZ85 1726 aaKnown RBP12.97□□□□□ -0.33
ITGA6-206ENST00000442250 CFAP43Q8NDM7 1665 aa12.97□□□□□ -0.33
ITGA6-206ENST00000442250 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.34
ITGA6-206ENST00000442250 PKD2Q13563 968 aa12.95□□□□□ -0.34
ITGA6-206ENST00000442250 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
ITGA6-206ENST00000442250 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
ITGA6-206ENST00000442250 PTPN23Q9H3S7 1636 aa12.94□□□□□ -0.34
ITGA6-206ENST00000442250 NAIPQ13075 1403 aa12.94□□□□□ -0.34
ITGA6-206ENST00000442250 KIF14Q15058 1648 aa12.93□□□□□ -0.34
ITGA6-206ENST00000442250 EFCAB2Q5VUJ9 269 aa12.92□□□□□ -0.34
ITGA6-206ENST00000442250 ANP32CO43423 234 aa12.92□□□□□ -0.34
ITGA6-206ENST00000442250 NUP155O75694 1391 aa12.92□□□□□ -0.34
ITGA6-206ENST00000442250 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
ITGA6-206ENST00000442250 ABCC5O15440 1437 aa12.91□□□□□ -0.34
ITGA6-206ENST00000442250 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
ITGA6-206ENST00000442250 DAPK1P53355 1430 aa12.9□□□□□ -0.34
ITGA6-206ENST00000442250 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
ITGA6-206ENST00000442250 CHGAP10645 457 aaKnown RBP12.89□□□□□ -0.35
ITGA6-206ENST00000442250 L3MBTL2Q969R5 705 aa12.89□□□□□ -0.35
ITGA6-206ENST00000442250 SALL2Q9Y467 1007 aaPredicted RBP12.89□□□□□ -0.35
ITGA6-206ENST00000442250 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
ITGA6-206ENST00000442250 CAMSAP2Q08AD1 1489 aa12.88□□□□□ -0.35
ITGA6-206ENST00000442250 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
ITGA6-206ENST00000442250 GGT6Q6P531 493 aa12.87□□□□□ -0.35
ITGA6-206ENST00000442250 ANKRD30AQ9BXX3 1397 aa12.87□□□□□ -0.35
ITGA6-206ENST00000442250 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
ITGA6-206ENST00000442250 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
ITGA6-206ENST00000442250 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
ITGA6-206ENST00000442250 B4GALNT3Q6L9W6 998 aa12.85□□□□□ -0.35
ITGA6-206ENST00000442250 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
ITGA6-206ENST00000442250 KIF3BO15066 747 aa12.85□□□□□ -0.35
ITGA6-206ENST00000442250 MLECQ14165 292 aa12.85□□□□□ -0.35
ITGA6-206ENST00000442250 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
ITGA6-206ENST00000442250 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
ITGA6-206ENST00000442250 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
ITGA6-206ENST00000442250 FAM69CQ0P6D2 419 aa12.84□□□□□ -0.35
ITGA6-206ENST00000442250 SENP3-EIF4A1A0A087X0R7 540 aa12.83□□□□□ -0.36
ITGA6-206ENST00000442250 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
ITGA6-206ENST00000442250 MAPKBP1O60336 1514 aa12.82□□□□□ -0.36
ITGA6-206ENST00000442250 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
ITGA6-206ENST00000442250 ABCA8O94911 1581 aa12.82□□□□□ -0.36
ITGA6-206ENST00000442250 KDM6BO15054 1643 aa12.82□□□□□ -0.36
ITGA6-206ENST00000442250 C9orf84Q5VXU9 1444 aa12.82□□□□□ -0.36
ITGA6-206ENST00000442250 ANKRD50Q9ULJ7 1429 aa12.81□□□□□ -0.36
ITGA6-206ENST00000442250 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
ITGA6-206ENST00000442250 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
ITGA6-206ENST00000442250 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
ITGA6-206ENST00000442250 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
ITGA6-206ENST00000442250 NUTM2DQ5VT03 806 aaPredicted RBP12.78□□□□□ -0.36
ITGA6-206ENST00000442250 SCAPERQ9BY12 1400 aa12.78□□□□□ -0.36
ITGA6-206ENST00000442250 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
ITGA6-206ENST00000442250 ASXL2Q76L83 1435 aa12.77□□□□□ -0.36
ITGA6-206ENST00000442250 ABCC2Q92887 1545 aa12.77□□□□□ -0.36
ITGA6-206ENST00000442250 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
ITGA6-206ENST00000442250 NBPF8Q3BBV2 869 aa12.76□□□□□ -0.37
ITGA6-206ENST00000442250 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
ITGA6-206ENST00000442250 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
ITGA6-206ENST00000442250 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
ITGA6-206ENST00000442250 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
ITGA6-206ENST00000442250 TCOF1Q13428 1488 aaKnown RBP12.74□□□□□ -0.37
ITGA6-206ENST00000442250 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
ITGA6-206ENST00000442250 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
ITGA6-206ENST00000442250 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
ITGA6-206ENST00000442250 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
ITGA6-206ENST00000442250 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
ITGA6-206ENST00000442250 EIF4G2P78344 907 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITGA6-206ENST00000442250 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITGA6-206ENST00000442250 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
ITGA6-206ENST00000442250 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.38
ITGA6-206ENST00000442250 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
ITGA6-206ENST00000442250 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
ITGA6-206ENST00000442250 CARD11Q9BXL7 1154 aa12.7□□□□□ -0.38
ITGA6-206ENST00000442250 CD109Q6YHK3 1445 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms