RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
LDB2-202ENST00000441778 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
LDB2-202ENST00000441778 NBPF8Q3BBV2 869 aa12.27□□□□□ -0.45
LDB2-202ENST00000441778 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
LDB2-202ENST00000441778 KIF7Q2M1P5 1343 aa12.26□□□□□ -0.45
LDB2-202ENST00000441778 SPATA31E1Q6ZUB1 1445 aa12.26□□□□□ -0.45
LDB2-202ENST00000441778 RPRD2Q5VT52 1461 aaKnown RBP12.25□□□□□ -0.45
LDB2-202ENST00000441778 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
LDB2-202ENST00000441778 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
LDB2-202ENST00000441778 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
LDB2-202ENST00000441778 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
LDB2-202ENST00000441778 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
LDB2-202ENST00000441778 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
LDB2-202ENST00000441778 GAPVD1Q14C86 1478 aa12.23□□□□□ -0.45
LDB2-202ENST00000441778 EPRSP07814 1512 aaKnown RBP12.22□□□□□ -0.45
LDB2-202ENST00000441778 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
LDB2-202ENST00000441778 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
LDB2-202ENST00000441778 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.46
LDB2-202ENST00000441778 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
LDB2-202ENST00000441778 NBR1Q14596 966 aa12.2□□□□□ -0.46
LDB2-202ENST00000441778 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
LDB2-202ENST00000441778 DNMT1P26358 1616 aaKnown RBP12.19□□□□□ -0.46
LDB2-202ENST00000441778 WDR62O43379 1518 aa12.18□□□□□ -0.46
LDB2-202ENST00000441778 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
LDB2-202ENST00000441778 DAPK1P53355 1430 aa12.18□□□□□ -0.46
LDB2-202ENST00000441778 ROCK1Q13464 1354 aa12.17□□□□□ -0.46
LDB2-202ENST00000441778 MBD5Q9P267 1494 aa12.16□□□□□ -0.46
LDB2-202ENST00000441778 IQGAP2Q13576 1575 aa12.16□□□□□ -0.46
LDB2-202ENST00000441778 ABCC5O15440 1437 aa12.15□□□□□ -0.46
LDB2-202ENST00000441778 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
LDB2-202ENST00000441778 CNGB1Q14028 1251 aaPredicted RBP12.15□□□□□ -0.46
LDB2-202ENST00000441778 PBRM1Q86U86 1689 aa12.14□□□□□ -0.47
LDB2-202ENST00000441778 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
LDB2-202ENST00000441778 PZPP20742 1482 aa12.14□□□□□ -0.47
LDB2-202ENST00000441778 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
LDB2-202ENST00000441778 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
LDB2-202ENST00000441778 KDM5CP41229 1560 aa12.14□□□□□ -0.47
LDB2-202ENST00000441778 KIF14Q15058 1648 aa12.13□□□□□ -0.47
LDB2-202ENST00000441778 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
LDB2-202ENST00000441778 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
LDB2-202ENST00000441778 ANP32AP39687 249 aaKnown RBP12.12□□□□□ -0.47
LDB2-202ENST00000441778 USP47Q96K76 1375 aa12.12□□□□□ -0.47
LDB2-202ENST00000441778 ZNF644Q9H582 1327 aaPredicted RBP12.12□□□□□ -0.47
LDB2-202ENST00000441778 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
LDB2-202ENST00000441778 ADGBQ8N7X0 1667 aa12.09□□□□□ -0.47
LDB2-202ENST00000441778 PNISRQ8TF01 805 aaKnown RBP12.09□□□□□ -0.47
LDB2-202ENST00000441778 ADAMTS12P58397 1594 aa12.09□□□□□ -0.47
LDB2-202ENST00000441778 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
LDB2-202ENST00000441778 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
LDB2-202ENST00000441778 KIAA1107Q9UPP5 1409 aa12.06□□□□□ -0.48
LDB2-202ENST00000441778 LRPPRCP42704 1394 aaKnown RBP12.06□□□□□ -0.48
LDB2-202ENST00000441778 CROCC2H7BZ55 1655 aa12.05□□□□□ -0.48
LDB2-202ENST00000441778 E9PCH4 1651 aa12.05□□□□□ -0.48
LDB2-202ENST00000441778 RTL5Q5HYW3 569 aaPredicted RBP12.05□□□□□ -0.48
LDB2-202ENST00000441778 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
LDB2-202ENST00000441778 NUP153P49790 1475 aaKnown RBP12.05□□□□□ -0.48
LDB2-202ENST00000441778 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
LDB2-202ENST00000441778 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
LDB2-202ENST00000441778 TMC1Q8TDI8 760 aa12.04□□□□□ -0.48
LDB2-202ENST00000441778 KIAA0556O60303 1618 aa12.03□□□□□ -0.48
LDB2-202ENST00000441778 RAPGEF6Q8TEU7 1601 aa12.03□□□□□ -0.48
LDB2-202ENST00000441778 ROCK2O75116 1388 aaKnown RBP12.03□□□□□ -0.48
LDB2-202ENST00000441778 RRP1P56182 461 aaKnown RBP12.02□□□□□ -0.48
LDB2-202ENST00000441778 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.48
LDB2-202ENST00000441778 KIF15Q9NS87 1388 aa12.02□□□□□ -0.48
LDB2-202ENST00000441778 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.49
LDB2-202ENST00000441778 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.49
LDB2-202ENST00000441778 ITSN2Q9NZM3 1697 aa12.02□□□□□ -0.49
LDB2-202ENST00000441778 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
LDB2-202ENST00000441778 ADGRL2O95490 1459 aa12.01□□□□□ -0.49
LDB2-202ENST00000441778 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
LDB2-202ENST00000441778 BRD4O60885 1362 aaPredicted RBP12□□□□□ -0.49
LDB2-202ENST00000441778 PKD2Q13563 968 aa12□□□□□ -0.49
LDB2-202ENST00000441778 MYBBP1AQ9BQG0 1328 aaKnown RBP11.99□□□□□ -0.49
LDB2-202ENST00000441778 PRG4Q92954 1404 aaPredicted RBP11.98□□□□□ -0.49
LDB2-202ENST00000441778 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
LDB2-202ENST00000441778 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
LDB2-202ENST00000441778 PDE4AP27815 886 aa11.98□□□□□ -0.49
LDB2-202ENST00000441778 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
LDB2-202ENST00000441778 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
LDB2-202ENST00000441778 RCAN3Q9UKA8 241 aa11.97□□□□□ -0.49
LDB2-202ENST00000441778 GPATCH8Q9UKJ3 1502 aaKnown RBP11.97□□□□□ -0.49
LDB2-202ENST00000441778 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
LDB2-202ENST00000441778 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
LDB2-202ENST00000441778 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
LDB2-202ENST00000441778 ADCY10Q96PN6 1610 aa11.96□□□□□ -0.49
LDB2-202ENST00000441778 BACH2Q9BYV9 841 aa11.96□□□□□ -0.49
LDB2-202ENST00000441778 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.49
LDB2-202ENST00000441778 ST20-MTHFSA0A0A6YYL1 179 aa11.96□□□□□ -0.5
LDB2-202ENST00000441778 RALBP1Q15311 655 aa11.96□□□□□ -0.5
LDB2-202ENST00000441778 CFDP1Q9UEE9 299 aaPredicted RBP11.96□□□□□ -0.5
LDB2-202ENST00000441778 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.5
LDB2-202ENST00000441778 CDC42BPAQ5VT25 1732 aa11.95□□□□□ -0.5
LDB2-202ENST00000441778 CEP170Q5SW79 1584 aa11.95□□□□□ -0.5
LDB2-202ENST00000441778 ANKRD50Q9ULJ7 1429 aa11.95□□□□□ -0.5
LDB2-202ENST00000441778 SALL2Q9Y467 1007 aaPredicted RBP11.95□□□□□ -0.5
LDB2-202ENST00000441778 NEFMP07197 916 aa11.94□□□□□ -0.5
LDB2-202ENST00000441778 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
LDB2-202ENST00000441778 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
LDB2-202ENST00000441778 ZNF777Q9ULD5 760 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms