RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ACIN1Q9UKV3 1341 aaKnown RBP19.35■□□□□ 0.69
CPSF4-206ENST00000441580 PLEKHD1A6NEE1 506 aa19.34■□□□□ 0.69
CPSF4-206ENST00000441580 SHANK2Q9UPX8 1470 aa19.34■□□□□ 0.69
CPSF4-206ENST00000441580 ZCCHC11Q5TAX3 1644 aaKnown RBP19.31■□□□□ 0.68
CPSF4-206ENST00000441580 ABCC5O15440 1437 aa19.31■□□□□ 0.68
CPSF4-206ENST00000441580 ADGRL2O95490 1459 aa19.3■□□□□ 0.68
CPSF4-206ENST00000441580 ARHGEF5Q12774 1597 aa19.29■□□□□ 0.68
CPSF4-206ENST00000441580 KDM5BQ9UGL1 1544 aa19.29■□□□□ 0.68
CPSF4-206ENST00000441580 CFDP1Q9UEE9 299 aaPredicted RBP19.27■□□□□ 0.68
CPSF4-206ENST00000441580 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.68
CPSF4-206ENST00000441580 TTC37Q6PGP7 1564 aa19.26■□□□□ 0.67
CPSF4-206ENST00000441580 CDC42BPBQ9Y5S2 1711 aa19.23■□□□□ 0.67
CPSF4-206ENST00000441580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.22■□□□□ 0.67
CPSF4-206ENST00000441580 SAMD9LQ8IVG5 1584 aa19.21■□□□□ 0.67
CPSF4-206ENST00000441580 KDM6BO15054 1643 aa19.21■□□□□ 0.67
CPSF4-206ENST00000441580 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
CPSF4-206ENST00000441580 PLEKHH2Q8IVE3 1493 aa19.2■□□□□ 0.66
CPSF4-206ENST00000441580 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
CPSF4-206ENST00000441580 CCDC141Q6ZP82 1450 aa19.18■□□□□ 0.66
CPSF4-206ENST00000441580 ARAP3Q8WWN8 1544 aa19.18■□□□□ 0.66
CPSF4-206ENST00000441580 ARHGAP5Q13017 1502 aa19.17■□□□□ 0.66
CPSF4-206ENST00000441580 MAST1Q9Y2H9 1570 aa19.17■□□□□ 0.66
CPSF4-206ENST00000441580 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
CPSF4-206ENST00000441580 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
CPSF4-206ENST00000441580 ZNF644Q9H582 1327 aaPredicted RBP19.16■□□□□ 0.66
CPSF4-206ENST00000441580 C9orf84Q5VXU9 1444 aa19.16■□□□□ 0.66
CPSF4-206ENST00000441580 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
CPSF4-206ENST00000441580 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.65
CPSF4-206ENST00000441580 SYCP2Q9BX26 1530 aa19.12■□□□□ 0.65
CPSF4-206ENST00000441580 PLXNC1O60486 1568 aa19.11■□□□□ 0.65
CPSF4-206ENST00000441580 MBD5Q9P267 1494 aa19.11■□□□□ 0.65
CPSF4-206ENST00000441580 WDR7Q9Y4E6 1490 aa19.11■□□□□ 0.65
CPSF4-206ENST00000441580 KIAA1107Q9UPP5 1409 aa19.1■□□□□ 0.65
CPSF4-206ENST00000441580 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
CPSF4-206ENST00000441580 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
CPSF4-206ENST00000441580 ABCC1P33527 1531 aa19.09■□□□□ 0.65
CPSF4-206ENST00000441580 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
CPSF4-206ENST00000441580 RSPH4AQ5TD94 716 aa19.07■□□□□ 0.64
CPSF4-206ENST00000441580 OSCARQ8IYS5 282 aa19.07■□□□□ 0.64
CPSF4-206ENST00000441580 ABCA9Q8IUA7 1624 aa19.07■□□□□ 0.64
CPSF4-206ENST00000441580 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
CPSF4-206ENST00000441580 DIEXFQ68CQ4 756 aaKnown RBP19.06■□□□□ 0.64
CPSF4-206ENST00000441580 PLCH2O75038 1416 aa19.06■□□□□ 0.64
CPSF4-206ENST00000441580 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
CPSF4-206ENST00000441580 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
CPSF4-206ENST00000441580 PZPP20742 1482 aa19.03■□□□□ 0.64
CPSF4-206ENST00000441580 KIF15Q9NS87 1388 aa19.01■□□□□ 0.63
CPSF4-206ENST00000441580 TSPY4P0CV99 314 aa19■□□□□ 0.63
CPSF4-206ENST00000441580 TSPY10P0CW01 314 aa19■□□□□ 0.63
CPSF4-206ENST00000441580 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
CPSF4-206ENST00000441580 UNC13BO14795 1591 aa19■□□□□ 0.63
CPSF4-206ENST00000441580 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
CPSF4-206ENST00000441580 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
CPSF4-206ENST00000441580 MPHOSPH9Q99550 1183 aa18.98■□□□□ 0.63
CPSF4-206ENST00000441580 ASXL2Q76L83 1435 aa18.96■□□□□ 0.63
CPSF4-206ENST00000441580 RPRD2Q5VT52 1461 aaKnown RBP18.96■□□□□ 0.63
CPSF4-206ENST00000441580 DUOX2Q9NRD8 1548 aa18.95■□□□□ 0.62
CPSF4-206ENST00000441580 EFCAB2Q5VUJ9 269 aa18.94■□□□□ 0.62
CPSF4-206ENST00000441580 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
CPSF4-206ENST00000441580 ERBINQ96RT1 1412 aa18.93■□□□□ 0.62
CPSF4-206ENST00000441580 ZFYVE16Q7Z3T8 1539 aa18.92■□□□□ 0.62
CPSF4-206ENST00000441580 ARHGEF12Q9NZN5 1544 aa18.92■□□□□ 0.62
CPSF4-206ENST00000441580 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.62
CPSF4-206ENST00000441580 TEX14Q8IWB6 1497 aa18.91■□□□□ 0.62
CPSF4-206ENST00000441580 INO80Q9ULG1 1556 aaPredicted RBP18.91■□□□□ 0.62
CPSF4-206ENST00000441580 MAGI2Q86UL8 1455 aa18.9■□□□□ 0.62
CPSF4-206ENST00000441580 IQGAP3Q86VI3 1631 aa18.9■□□□□ 0.62
CPSF4-206ENST00000441580 PPP1R15AO75807 674 aaPredicted RBP18.9■□□□□ 0.62
CPSF4-206ENST00000441580 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
CPSF4-206ENST00000441580 FANCAO15360 1455 aa18.9■□□□□ 0.62
CPSF4-206ENST00000441580 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
CPSF4-206ENST00000441580 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
CPSF4-206ENST00000441580 FAM135AQ9P2D6 1515 aa18.88■□□□□ 0.61
CPSF4-206ENST00000441580 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
CPSF4-206ENST00000441580 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
CPSF4-206ENST00000441580 NUP155O75694 1391 aa18.84■□□□□ 0.61
CPSF4-206ENST00000441580 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
CPSF4-206ENST00000441580 EIF2AK4Q9P2K8 1649 aaKnown RBP18.84■□□□□ 0.61
CPSF4-206ENST00000441580 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.61
CPSF4-206ENST00000441580 DEPDC5O75140 1603 aa18.81■□□□□ 0.6
CPSF4-206ENST00000441580 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
CPSF4-206ENST00000441580 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
CPSF4-206ENST00000441580 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
CPSF4-206ENST00000441580 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.6
CPSF4-206ENST00000441580 PKD2Q13563 968 aa18.77■□□□□ 0.6
CPSF4-206ENST00000441580 KDM5CP41229 1560 aa18.76■□□□□ 0.59
CPSF4-206ENST00000441580 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
CPSF4-206ENST00000441580 FOXD1Q16676 465 aa18.75■□□□□ 0.59
CPSF4-206ENST00000441580 NEO1Q92859 1461 aa18.74■□□□□ 0.59
CPSF4-206ENST00000441580 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
CPSF4-206ENST00000441580 GLI2P10070 1586 aa18.73■□□□□ 0.59
CPSF4-206ENST00000441580 MAP3K4Q9Y6R4 1608 aa18.73■□□□□ 0.59
CPSF4-206ENST00000441580 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-206ENST00000441580 CD109Q6YHK3 1445 aa18.73■□□□□ 0.59
CPSF4-206ENST00000441580 POGZQ7Z3K3 1410 aa18.73■□□□□ 0.59
CPSF4-206ENST00000441580 HECW2Q9P2P5 1572 aa18.72■□□□□ 0.59
CPSF4-206ENST00000441580 TET3O43151 1660 aa18.71■□□□□ 0.59
CPSF4-206ENST00000441580 ATP10AO60312 1499 aa18.71■□□□□ 0.59
CPSF4-206ENST00000441580 L3MBTL2Q969R5 705 aa18.7■□□□□ 0.58
CPSF4-206ENST00000441580 KIDINS220Q9ULH0 1771 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms