RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
ATL1-202ENST00000441560 ARHGAP35Q9NRY4 1499 aa12.83□□□□□ -0.35
ATL1-202ENST00000441560 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.35
ATL1-202ENST00000441560 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.35
ATL1-202ENST00000441560 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.36
ATL1-202ENST00000441560 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
ATL1-202ENST00000441560 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
ATL1-202ENST00000441560 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
ATL1-202ENST00000441560 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
ATL1-202ENST00000441560 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.36
ATL1-202ENST00000441560 PANK2Q9BZ23 570 aa12.81□□□□□ -0.36
ATL1-202ENST00000441560 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
ATL1-202ENST00000441560 LRRC9Q6ZRR7 1453 aa12.8□□□□□ -0.36
ATL1-202ENST00000441560 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
ATL1-202ENST00000441560 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
ATL1-202ENST00000441560 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
ATL1-202ENST00000441560 KIF7Q2M1P5 1343 aa12.8□□□□□ -0.36
ATL1-202ENST00000441560 CENPJQ9HC77 1338 aaPredicted RBP12.8□□□□□ -0.36
ATL1-202ENST00000441560 PLIN1O60240 522 aa12.79□□□□□ -0.36
ATL1-202ENST00000441560 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
ATL1-202ENST00000441560 GOLGA6L3A6NEY3 463 aa12.79□□□□□ -0.36
ATL1-202ENST00000441560 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
ATL1-202ENST00000441560 TMC1Q8TDI8 760 aa12.79□□□□□ -0.36
ATL1-202ENST00000441560 UACAQ9BZF9 1416 aa12.78□□□□□ -0.36
ATL1-202ENST00000441560 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
ATL1-202ENST00000441560 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
ATL1-202ENST00000441560 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
ATL1-202ENST00000441560 MAP3K1Q13233 1512 aa12.77□□□□□ -0.36
ATL1-202ENST00000441560 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.36
ATL1-202ENST00000441560 C8orf34Q49A92 452 aa12.76□□□□□ -0.37
ATL1-202ENST00000441560 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
ATL1-202ENST00000441560 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
ATL1-202ENST00000441560 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
ATL1-202ENST00000441560 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
ATL1-202ENST00000441560 ESPNB1AK53 854 aa12.74□□□□□ -0.37
ATL1-202ENST00000441560 TPM2P07951 284 aa12.73□□□□□ -0.37
ATL1-202ENST00000441560 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
ATL1-202ENST00000441560 L3MBTL2Q969R5 705 aa12.73□□□□□ -0.37
ATL1-202ENST00000441560 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
ATL1-202ENST00000441560 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
ATL1-202ENST00000441560 ERBB4Q15303 1308 aa12.71□□□□□ -0.37
ATL1-202ENST00000441560 KTN1Q86UP2 1357 aaKnown RBP12.71□□□□□ -0.37
ATL1-202ENST00000441560 FSD2A1L4K1 749 aa12.71□□□□□ -0.38
ATL1-202ENST00000441560 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
ATL1-202ENST00000441560 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
ATL1-202ENST00000441560 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
ATL1-202ENST00000441560 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
ATL1-202ENST00000441560 HFM1A2PYH4 1435 aa12.68□□□□□ -0.38
ATL1-202ENST00000441560 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
ATL1-202ENST00000441560 BECN1Q14457 450 aa12.67□□□□□ -0.38
ATL1-202ENST00000441560 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
ATL1-202ENST00000441560 NBPF8Q3BBV2 869 aa12.67□□□□□ -0.38
ATL1-202ENST00000441560 C20orf194Q5TEA3 1177 aa12.67□□□□□ -0.38
ATL1-202ENST00000441560 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
ATL1-202ENST00000441560 ARID3AQ99856 593 aa12.67□□□□□ -0.38
ATL1-202ENST00000441560 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
ATL1-202ENST00000441560 MRE11P49959 708 aa12.66□□□□□ -0.38
ATL1-202ENST00000441560 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
ATL1-202ENST00000441560 PTPRKQ15262 1439 aa12.65□□□□□ -0.38
ATL1-202ENST00000441560 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
ATL1-202ENST00000441560 TOP2BQ02880 1626 aa12.64□□□□□ -0.39
ATL1-202ENST00000441560 PTPN23Q9H3S7 1636 aa12.64□□□□□ -0.39
ATL1-202ENST00000441560 FOXD1Q16676 465 aa12.64□□□□□ -0.39
ATL1-202ENST00000441560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
ATL1-202ENST00000441560 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
ATL1-202ENST00000441560 FMN1Q68DA7 1419 aa12.64□□□□□ -0.39
ATL1-202ENST00000441560 NAIPQ13075 1403 aa12.63□□□□□ -0.39
ATL1-202ENST00000441560 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
ATL1-202ENST00000441560 PLCD3Q8N3E9 789 aa12.63□□□□□ -0.39
ATL1-202ENST00000441560 LRPPRCP42704 1394 aaKnown RBP12.63□□□□□ -0.39
ATL1-202ENST00000441560 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
ATL1-202ENST00000441560 GRPEL1Q9HAV7 217 aa12.63□□□□□ -0.39
ATL1-202ENST00000441560 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
ATL1-202ENST00000441560 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
ATL1-202ENST00000441560 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
ATL1-202ENST00000441560 RRP7BPQ9NSQ0 103 aa12.61□□□□□ -0.39
ATL1-202ENST00000441560 SPATA31E1Q6ZUB1 1445 aa12.61□□□□□ -0.39
ATL1-202ENST00000441560 FGD6Q6ZV73 1430 aa12.61□□□□□ -0.39
ATL1-202ENST00000441560 USP19O94966 1318 aa12.61□□□□□ -0.39
ATL1-202ENST00000441560 MCM4P33991 863 aa12.6□□□□□ -0.39
ATL1-202ENST00000441560 KIF27Q86VH2 1401 aa12.6□□□□□ -0.39
ATL1-202ENST00000441560 VGLL3A8MV65 326 aa12.6□□□□□ -0.39
ATL1-202ENST00000441560 TRAK2O60296 914 aa12.6□□□□□ -0.39
ATL1-202ENST00000441560 SEC24BO95487 1268 aa12.59□□□□□ -0.39
ATL1-202ENST00000441560 RIPK4P57078 832 aa12.59□□□□□ -0.39
ATL1-202ENST00000441560 RSPH4AQ5TD94 716 aa12.59□□□□□ -0.39
ATL1-202ENST00000441560 CHIC2Q9UKJ5 165 aa12.58□□□□□ -0.4
ATL1-202ENST00000441560 MYOM3Q5VTT5 1437 aa12.57□□□□□ -0.4
ATL1-202ENST00000441560 ZNF830Q96NB3 372 aaPredicted RBP12.57□□□□□ -0.4
ATL1-202ENST00000441560 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
ATL1-202ENST00000441560 MAP7D2Q96T17 732 aa12.56□□□□□ -0.4
ATL1-202ENST00000441560 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
ATL1-202ENST00000441560 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
ATL1-202ENST00000441560 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
ATL1-202ENST00000441560 ZNF326Q5BKZ1 582 aaKnown RBP12.56□□□□□ -0.4
ATL1-202ENST00000441560 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
ATL1-202ENST00000441560 MPHOSPH9Q99550 1183 aa12.55□□□□□ -0.4
ATL1-202ENST00000441560 DENND4BO75064 1496 aaPredicted RBP12.55□□□□□ -0.4
ATL1-202ENST00000441560 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
ATL1-202ENST00000441560 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms