RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 ZNF644Q9H582 1327 aaPredicted RBP35.29■■■■□ 3.24
PDPK1-204ENST00000441549 OSCARQ8IYS5 282 aa35.29■■■■□ 3.24
PDPK1-204ENST00000441549 KDM5BQ9UGL1 1544 aa35.25■■■■□ 3.23
PDPK1-204ENST00000441549 CHIC2Q9UKJ5 165 aa35.24■■■■□ 3.23
PDPK1-204ENST00000441549 RRP7BPQ9NSQ0 103 aa35.21■■■■□ 3.23
PDPK1-204ENST00000441549 ZCCHC11Q5TAX3 1644 aaKnown RBP35.21■■■■□ 3.23
PDPK1-204ENST00000441549 ACIN1Q9UKV3 1341 aaKnown RBP35.19■■■■□ 3.22
PDPK1-204ENST00000441549 ZNF777Q9ULD5 760 aaPredicted RBP35.15■■■■□ 3.22
PDPK1-204ENST00000441549 PREX2Q70Z35 1606 aa35.14■■■■□ 3.22
PDPK1-204ENST00000441549 CROCC2H7BZ55 1655 aa35.14■■■■□ 3.22
PDPK1-204ENST00000441549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.11■■■■□ 3.217e-7■■□□□ 14.3
PDPK1-204ENST00000441549 ADGBQ8N7X0 1667 aa35.1■■■■□ 3.21
PDPK1-204ENST00000441549 ADGRL2O95490 1459 aa35.1■■■■□ 3.21
PDPK1-204ENST00000441549 CDC42BPBQ9Y5S2 1711 aa35.08■■■■□ 3.21
PDPK1-204ENST00000441549 TTC37Q6PGP7 1564 aa35.07■■■■□ 3.2
PDPK1-204ENST00000441549 SHANK2Q9UPX8 1470 aa35.06■■■■□ 3.2
PDPK1-204ENST00000441549 KDM6BO15054 1643 aa35.05■■■■□ 3.2
PDPK1-204ENST00000441549 ARHGEF5Q12774 1597 aa35.05■■■■□ 3.2
PDPK1-204ENST00000441549 NCOA1Q15788 1441 aa35.04■■■■□ 3.2
PDPK1-204ENST00000441549 TIMELESSQ9UNS1 1208 aa35.02■■■■□ 3.2
PDPK1-204ENST00000441549 ZNF316A6NFI3 1004 aaPredicted RBP35.01■■■■□ 3.2
PDPK1-204ENST00000441549 MYO5CQ9NQX4 1742 aa35■■■■□ 3.19
PDPK1-204ENST00000441549 SAMD9LQ8IVG5 1584 aa35■■■■□ 3.19
PDPK1-204ENST00000441549 ANKRD30AQ9BXX3 1397 aa34.99■■■■□ 3.19
PDPK1-204ENST00000441549 RSPH4AQ5TD94 716 aa34.98■■■■□ 3.19
PDPK1-204ENST00000441549 MBD5Q9P267 1494 aa34.97■■■■□ 3.19
PDPK1-204ENST00000441549 ARHGAP5Q13017 1502 aa34.96■■■■□ 3.19
PDPK1-204ENST00000441549 KCNH8Q96L42 1107 aa34.95■■■■□ 3.18
PDPK1-204ENST00000441549 C9orf84Q5VXU9 1444 aa34.93■■■■□ 3.18
PDPK1-204ENST00000441549 SIN3AQ96ST3 1273 aa34.93■■■■□ 3.18
PDPK1-204ENST00000441549 TRIM52Q96A61 297 aa34.92■■■■□ 3.18
PDPK1-204ENST00000441549 PLEKHH2Q8IVE3 1493 aa34.92■■■■□ 3.18
PDPK1-204ENST00000441549 PLCH2O75038 1416 aa34.92■■■■□ 3.18
PDPK1-204ENST00000441549 TSPY4P0CV99 314 aa34.92■■■■□ 3.18
PDPK1-204ENST00000441549 TSPY10P0CW01 314 aa34.92■■■■□ 3.18
PDPK1-204ENST00000441549 CCDC141Q6ZP82 1450 aa34.91■■■■□ 3.18
PDPK1-204ENST00000441549 WDR7Q9Y4E6 1490 aa34.9■■■■□ 3.18
PDPK1-204ENST00000441549 HNRNPMP52272 730 aaKnown RBP eCLIP34.89■■■■□ 3.187e-8■■■□□ 17
PDPK1-204ENST00000441549 KIAA1107Q9UPP5 1409 aa34.89■■■■□ 3.18
PDPK1-204ENST00000441549 NEUROD1Q13562 356 aa34.87■■■■□ 3.17
PDPK1-204ENST00000441549 ARAP3Q8WWN8 1544 aa34.85■■■■□ 3.17
PDPK1-204ENST00000441549 DENND4BO75064 1496 aaPredicted RBP34.85■■■■□ 3.17
PDPK1-204ENST00000441549 MPHOSPH9Q99550 1183 aa34.84■■■■□ 3.17
PDPK1-204ENST00000441549 SYCP2Q9BX26 1530 aa34.82■■■■□ 3.16
PDPK1-204ENST00000441549 MAST1Q9Y2H9 1570 aa34.8■■■■□ 3.16
PDPK1-204ENST00000441549 ANKRD50Q9ULJ7 1429 aa34.8■■■■□ 3.16
PDPK1-204ENST00000441549 EFCAB2Q5VUJ9 269 aa34.8■■■■□ 3.16
PDPK1-204ENST00000441549 ASXL2Q76L83 1435 aa34.76■■■■□ 3.15
PDPK1-204ENST00000441549 NPM1P06748 294 aaKnown RBP eCLIP34.74■■■■□ 3.15
PDPK1-204ENST00000441549 DIEXFQ68CQ4 756 aaKnown RBP34.74■■■■□ 3.15
PDPK1-204ENST00000441549 ABCA9Q8IUA7 1624 aa34.74■■■■□ 3.15
PDPK1-204ENST00000441549 KIF15Q9NS87 1388 aa34.72■■■■□ 3.15
PDPK1-204ENST00000441549 TONSLQ96HA7 1378 aa34.71■■■■□ 3.15
PDPK1-204ENST00000441549 ABCC1P33527 1531 aa34.7■■■■□ 3.15
PDPK1-204ENST00000441549 PZPP20742 1482 aa34.69■■■■□ 3.14
PDPK1-204ENST00000441549 ARHGEF12Q9NZN5 1544 aa34.67■■■■□ 3.14
PDPK1-204ENST00000441549 PPP1R15AO75807 674 aaPredicted RBP34.67■■■■□ 3.14
PDPK1-204ENST00000441549 SLC4A1APQ9BWU0 796 aaKnown RBP34.67■■■■□ 3.14
PDPK1-204ENST00000441549 PLXNC1O60486 1568 aa34.64■■■■□ 3.14
PDPK1-204ENST00000441549 ANKRD30BQ9BXX2 1392 aa34.63■■■■□ 3.13
PDPK1-204ENST00000441549 KDM5DQ9BY66 1539 aa34.62■■■■□ 3.13
PDPK1-204ENST00000441549 FANCAO15360 1455 aa34.56■■■■□ 3.12
PDPK1-204ENST00000441549 FOXD1Q16676 465 aa34.53■■■■□ 3.12
PDPK1-204ENST00000441549 TRAPPC8Q9Y2L5 1435 aa34.53■■■■□ 3.12
PDPK1-204ENST00000441549 NUP155O75694 1391 aa34.52■■■■□ 3.12
PDPK1-204ENST00000441549 DUOX2Q9NRD8 1548 aa34.51■■■■□ 3.12
PDPK1-204ENST00000441549 RPRD2Q5VT52 1461 aaKnown RBP34.51■■■■□ 3.11
PDPK1-204ENST00000441549 RTEL1-TNFRSF6BF6WH68 1400 aa34.49■■■■□ 3.11
PDPK1-204ENST00000441549 ERBINQ96RT1 1412 aa34.45■■■■□ 3.11
PDPK1-204ENST00000441549 PKD2Q13563 968 aa34.44■■■■□ 3.1
PDPK1-204ENST00000441549 UNC13BO14795 1591 aa34.44■■■■□ 3.1
PDPK1-204ENST00000441549 RIMBP3CA6NJZ7 1639 aa34.42■■■■□ 3.1
PDPK1-204ENST00000441549 RIMBP3BA6NNM3 1639 aa34.42■■■■□ 3.1
PDPK1-204ENST00000441549 RIMBP3Q9UFD9 1639 aa34.42■■■■□ 3.1
PDPK1-204ENST00000441549 ADGRL1O94910 1474 aa34.42■■■■□ 3.1
PDPK1-204ENST00000441549 SPAG9O60271 1321 aaKnown RBP34.42■■■■□ 3.1
PDPK1-204ENST00000441549 ZFYVE16Q7Z3T8 1539 aa34.39■■■■□ 3.1
PDPK1-204ENST00000441549 CFAP74Q9C0B2 1584 aa34.38■■■■□ 3.09
PDPK1-204ENST00000441549 CD109Q6YHK3 1445 aa34.38■■■■□ 3.09
PDPK1-204ENST00000441549 FAM135AQ9P2D6 1515 aa34.37■■■■□ 3.09
PDPK1-204ENST00000441549 AFAP1Q8N556 730 aa34.37■■■■□ 3.09
PDPK1-204ENST00000441549 SCAPERQ9BY12 1400 aa34.37■■■■□ 3.09
PDPK1-204ENST00000441549 INO80Q9ULG1 1556 aaPredicted RBP34.34■■■■□ 3.09
PDPK1-204ENST00000441549 L3MBTL2Q969R5 705 aa34.33■■■■□ 3.09
PDPK1-204ENST00000441549 TEX14Q8IWB6 1497 aa34.33■■■■□ 3.09
PDPK1-204ENST00000441549 CYB5RLQ6IPT4 315 aa34.33■■■■□ 3.09
PDPK1-204ENST00000441549 MAGI2Q86UL8 1455 aa34.32■■■■□ 3.08
PDPK1-204ENST00000441549 ATP7AQ04656 1500 aa34.3■■■■□ 3.08
PDPK1-204ENST00000441549 IQGAP3Q86VI3 1631 aa34.3■■■■□ 3.08
PDPK1-204ENST00000441549 ZNF518AQ6AHZ1 1483 aa34.24■■■■□ 3.07
PDPK1-204ENST00000441549 NEO1Q92859 1461 aa34.21■■■■□ 3.07
PDPK1-204ENST00000441549 GLI2P10070 1586 aa34.2■■■■□ 3.06
PDPK1-204ENST00000441549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.17■■■■□ 3.061e-9■■■□□ 16.9
PDPK1-204ENST00000441549 POGZQ7Z3K3 1410 aa34.16■■■■□ 3.06
PDPK1-204ENST00000441549 KDM5CP41229 1560 aa34.15■■■■□ 3.06
PDPK1-204ENST00000441549 MAP3K4Q9Y6R4 1608 aa34.15■■■■□ 3.06
PDPK1-204ENST00000441549 DEPDC5O75140 1603 aa34.13■■■■□ 3.05
PDPK1-204ENST00000441549 EIF2AK4Q9P2K8 1649 aaKnown RBP34.13■■■■□ 3.05
PDPK1-204ENST00000441549 DHX29Q7Z478 1369 aaKnown RBP34.13■■■■□ 3.05
PDPK1-204ENST00000441549 KIDINS220Q9ULH0 1771 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms