RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 COL17A1Q9UMD9 1497 aaPredicted RBP22.06■■□□□ 1.12
NR1H3-211ENST00000441012 HFM1A2PYH4 1435 aa22.05■■□□□ 1.12
NR1H3-211ENST00000441012 TCOF1Q13428 1488 aaKnown RBP22.05■■□□□ 1.12
NR1H3-211ENST00000441012 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
NR1H3-211ENST00000441012 MIA2Q96PC5 1412 aa22.01■■□□□ 1.11
NR1H3-211ENST00000441012 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
NR1H3-211ENST00000441012 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
NR1H3-211ENST00000441012 PTPN23Q9H3S7 1636 aa21.98■■□□□ 1.11
NR1H3-211ENST00000441012 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
NR1H3-211ENST00000441012 PTPRKQ15262 1439 aa21.95■■□□□ 1.1
NR1H3-211ENST00000441012 CD109Q6YHK3 1445 aa21.94■■□□□ 1.1
NR1H3-211ENST00000441012 NAIPQ13075 1403 aa21.93■■□□□ 1.1
NR1H3-211ENST00000441012 KCNH8Q96L42 1107 aa21.93■■□□□ 1.1
NR1H3-211ENST00000441012 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
NR1H3-211ENST00000441012 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
NR1H3-211ENST00000441012 MIER1Q8N108 512 aa21.91■■□□□ 1.1
NR1H3-211ENST00000441012 ATP10BO94823 1461 aa21.89■■□□□ 1.1
NR1H3-211ENST00000441012 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
NR1H3-211ENST00000441012 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
NR1H3-211ENST00000441012 CDK13Q14004 1512 aaKnown RBP21.87■■□□□ 1.09
NR1H3-211ENST00000441012 ABCA9Q8IUA7 1624 aa21.87■■□□□ 1.09
NR1H3-211ENST00000441012 NUP153P49790 1475 aaKnown RBP21.86■■□□□ 1.09
NR1H3-211ENST00000441012 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
NR1H3-211ENST00000441012 GCC2Q8IWJ2 1684 aa21.84■■□□□ 1.09
NR1H3-211ENST00000441012 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
NR1H3-211ENST00000441012 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
NR1H3-211ENST00000441012 ARAP3Q8WWN8 1544 aa21.79■■□□□ 1.08
NR1H3-211ENST00000441012 SIN3AQ96ST3 1273 aa21.77■■□□□ 1.08
NR1H3-211ENST00000441012 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
NR1H3-211ENST00000441012 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
NR1H3-211ENST00000441012 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
NR1H3-211ENST00000441012 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
NR1H3-211ENST00000441012 DAPK1P53355 1430 aa21.69■■□□□ 1.06
NR1H3-211ENST00000441012 NEO1Q92859 1461 aa21.69■■□□□ 1.06
NR1H3-211ENST00000441012 FRMPD1Q5SYB0 1578 aa21.68■■□□□ 1.06
NR1H3-211ENST00000441012 ITSN2Q9NZM3 1697 aa21.67■■□□□ 1.06
NR1H3-211ENST00000441012 ABCC5O15440 1437 aa21.66■■□□□ 1.06
NR1H3-211ENST00000441012 RICTORQ6R327 1708 aa21.63■■□□□ 1.05
NR1H3-211ENST00000441012 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
NR1H3-211ENST00000441012 RRP7BPQ9NSQ0 103 aa21.62■■□□□ 1.05
NR1H3-211ENST00000441012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.62■■□□□ 1.05
NR1H3-211ENST00000441012 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
NR1H3-211ENST00000441012 ADAMTSL3P82987 1691 aa21.61■■□□□ 1.05
NR1H3-211ENST00000441012 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
NR1H3-211ENST00000441012 RAPGEF3O95398 923 aa21.61■■□□□ 1.05
NR1H3-211ENST00000441012 GPATCH8Q9UKJ3 1502 aaKnown RBP21.61■■□□□ 1.05
NR1H3-211ENST00000441012 GTF3C3Q9Y5Q9 886 aa21.61■■□□□ 1.05
NR1H3-211ENST00000441012 ADGRL2O95490 1459 aa21.59■■□□□ 1.05
NR1H3-211ENST00000441012 PLEKHD1A6NEE1 506 aa21.58■■□□□ 1.05
NR1H3-211ENST00000441012 BCORL1Q5H9F3 1711 aa21.58■■□□□ 1.05
NR1H3-211ENST00000441012 CHIC2Q9UKJ5 165 aa21.58■■□□□ 1.04
NR1H3-211ENST00000441012 CAMSAP2Q08AD1 1489 aa21.57■■□□□ 1.04
NR1H3-211ENST00000441012 ARHGEF40Q8TER5 1519 aa21.56■■□□□ 1.04
NR1H3-211ENST00000441012 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
NR1H3-211ENST00000441012 YTHDC1Q96MU7 727 aaKnown RBP21.55■■□□□ 1.04
NR1H3-211ENST00000441012 FANCAO15360 1455 aa21.54■■□□□ 1.04
NR1H3-211ENST00000441012 CFDP1Q9UEE9 299 aaPredicted RBP21.54■■□□□ 1.04
NR1H3-211ENST00000441012 MADDQ8WXG6 1647 aa21.53■■□□□ 1.04
NR1H3-211ENST00000441012 ADGBQ8N7X0 1667 aa21.52■■□□□ 1.04
NR1H3-211ENST00000441012 KIF14Q15058 1648 aa21.52■■□□□ 1.03
NR1H3-211ENST00000441012 TRIM52Q96A61 297 aa21.51■■□□□ 1.03
NR1H3-211ENST00000441012 NCOA1Q15788 1441 aa21.51■■□□□ 1.03
NR1H3-211ENST00000441012 MYO5CQ9NQX4 1742 aa21.51■■□□□ 1.03
NR1H3-211ENST00000441012 SHANK2Q9UPX8 1470 aa21.51■■□□□ 1.03
NR1H3-211ENST00000441012 CROCC2H7BZ55 1655 aa21.5■■□□□ 1.03
NR1H3-211ENST00000441012 PTPRMP28827 1452 aa21.5■■□□□ 1.03
NR1H3-211ENST00000441012 ANKRD30BQ9BXX2 1392 aa21.49■■□□□ 1.03
NR1H3-211ENST00000441012 ZMYM4Q5VZL5 1548 aa21.49■■□□□ 1.03
NR1H3-211ENST00000441012 ZNF644Q9H582 1327 aaPredicted RBP21.49■■□□□ 1.03
NR1H3-211ENST00000441012 SIGLEC1Q9BZZ2 1709 aa21.47■■□□□ 1.03
NR1H3-211ENST00000441012 RIMS1Q86UR5 1692 aaKnown RBP21.47■■□□□ 1.03
NR1H3-211ENST00000441012 RPRD2Q5VT52 1461 aaKnown RBP21.46■■□□□ 1.03
NR1H3-211ENST00000441012 ANKRD30AQ9BXX3 1397 aa21.45■■□□□ 1.02
NR1H3-211ENST00000441012 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
NR1H3-211ENST00000441012 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
NR1H3-211ENST00000441012 ZFYVE16Q7Z3T8 1539 aa21.43■■□□□ 1.02
NR1H3-211ENST00000441012 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
NR1H3-211ENST00000441012 ARID4BQ4LE39 1312 aaPredicted RBP21.43■■□□□ 1.02
NR1H3-211ENST00000441012 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
NR1H3-211ENST00000441012 ILDR1Q86SU0 546 aaPredicted RBP21.42■■□□□ 1.02
NR1H3-211ENST00000441012 PLCH2O75038 1416 aa21.42■■□□□ 1.02
NR1H3-211ENST00000441012 ARHGEF5Q12774 1597 aa21.41■■□□□ 1.02
NR1H3-211ENST00000441012 PZPP20742 1482 aa21.4■■□□□ 1.02
NR1H3-211ENST00000441012 YEATS2Q9ULM3 1422 aa21.39■■□□□ 1.01
NR1H3-211ENST00000441012 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
NR1H3-211ENST00000441012 MAGI2Q86UL8 1455 aa21.38■■□□□ 1.01
NR1H3-211ENST00000441012 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
NR1H3-211ENST00000441012 RSPH4AQ5TD94 716 aa21.37■■□□□ 1.01
NR1H3-211ENST00000441012 SCAPERQ9BY12 1400 aa21.37■■□□□ 1.01
NR1H3-211ENST00000441012 CDC42BPBQ9Y5S2 1711 aa21.36■■□□□ 1.01
NR1H3-211ENST00000441012 SLC4A1APQ9BWU0 796 aaKnown RBP21.36■■□□□ 1.01
NR1H3-211ENST00000441012 KDM5DQ9BY66 1539 aa21.35■■□□□ 1.01
NR1H3-211ENST00000441012 L3MBTL2Q969R5 705 aa21.34■■□□□ 1.01
NR1H3-211ENST00000441012 KIAA1107Q9UPP5 1409 aa21.34■■□□□ 1.01
NR1H3-211ENST00000441012 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
NR1H3-211ENST00000441012 ANKRD50Q9ULJ7 1429 aa21.33■■□□□ 1.01
NR1H3-211ENST00000441012 ANP32CO43423 234 aa21.33■■□□□ 1
NR1H3-211ENST00000441012 ARHGAP5Q13017 1502 aa21.31■■□□□ 1
NR1H3-211ENST00000441012 PREX2Q70Z35 1606 aa21.31■■□□□ 1
NR1H3-211ENST00000441012 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms