RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 CCDC18Q5T9S5 1454 aa14.77□□□□□ -0.05
STRC-203ENST00000440125 CYB5RLQ6IPT4 315 aa14.75□□□□□ -0.05
STRC-203ENST00000440125 RCAN3Q9UKA8 241 aa14.75□□□□□ -0.05
STRC-203ENST00000440125 NEUROD2Q15784 382 aa14.74□□□□□ -0.05
STRC-203ENST00000440125 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
STRC-203ENST00000440125 LRRC9Q6ZRR7 1453 aa14.73□□□□□ -0.05
STRC-203ENST00000440125 URB2Q14146 1524 aaKnown RBP14.73□□□□□ -0.05
STRC-203ENST00000440125 CARMIL2Q6F5E8 1435 aa14.72□□□□□ -0.05
STRC-203ENST00000440125 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
STRC-203ENST00000440125 IPO9Q96P70 1041 aaKnown RBP14.71□□□□□ -0.05
STRC-203ENST00000440125 FANCIQ9NVI1 1328 aa14.71□□□□□ -0.05
STRC-203ENST00000440125 PRXQ9BXM0 1461 aa14.71□□□□□ -0.06
STRC-203ENST00000440125 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
STRC-203ENST00000440125 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
STRC-203ENST00000440125 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
STRC-203ENST00000440125 BECN1Q14457 450 aa14.69□□□□□ -0.06
STRC-203ENST00000440125 SLC24A1O60721 1099 aa14.69□□□□□ -0.06
STRC-203ENST00000440125 WASHC2AQ641Q2 1341 aa14.68□□□□□ -0.06
STRC-203ENST00000440125 NUP155O75694 1391 aa14.68□□□□□ -0.06
STRC-203ENST00000440125 GRIN2BQ13224 1484 aa14.68□□□□□ -0.06
STRC-203ENST00000440125 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
STRC-203ENST00000440125 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
STRC-203ENST00000440125 TMF1P82094 1093 aa14.68□□□□□ -0.06
STRC-203ENST00000440125 FRAT1Q92837 279 aaPredicted RBP14.68□□□□□ -0.06
STRC-203ENST00000440125 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
STRC-203ENST00000440125 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
STRC-203ENST00000440125 TCERG1O14776 1098 aaKnown RBP14.67□□□□□ -0.06
STRC-203ENST00000440125 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
STRC-203ENST00000440125 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
STRC-203ENST00000440125 KTN1Q86UP2 1357 aaKnown RBP14.66□□□□□ -0.06
STRC-203ENST00000440125 RALBP1Q15311 655 aa14.66□□□□□ -0.06
STRC-203ENST00000440125 UACAQ9BZF9 1416 aa14.65□□□□□ -0.06
STRC-203ENST00000440125 ST20-MTHFSA0A0A6YYL1 179 aa14.65□□□□□ -0.06
STRC-203ENST00000440125 WDR97A6NE52 1622 aa14.65□□□□□ -0.06
STRC-203ENST00000440125 ROCK2O75116 1388 aaKnown RBP14.63□□□□□ -0.07
STRC-203ENST00000440125 ANP32BQ92688 251 aaKnown RBP14.63□□□□□ -0.07
STRC-203ENST00000440125 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
STRC-203ENST00000440125 CCDC7Q96M83 1385 aa14.62□□□□□ -0.07
STRC-203ENST00000440125 EXOC6Q8TAG9 804 aa14.62□□□□□ -0.07
STRC-203ENST00000440125 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
STRC-203ENST00000440125 KIF7Q2M1P5 1343 aa14.61□□□□□ -0.07
STRC-203ENST00000440125 CCDC184Q52MB2 194 aa14.61□□□□□ -0.07
STRC-203ENST00000440125 PTPRGP23470 1445 aa14.6□□□□□ -0.07
STRC-203ENST00000440125 ANKRD30AQ9BXX3 1397 aa14.6□□□□□ -0.07
STRC-203ENST00000440125 PLIN1O60240 522 aa14.6□□□□□ -0.07
STRC-203ENST00000440125 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
STRC-203ENST00000440125 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
STRC-203ENST00000440125 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.07
STRC-203ENST00000440125 USP47Q96K76 1375 aa14.58□□□□□ -0.07
STRC-203ENST00000440125 ZNF644Q9H582 1327 aaPredicted RBP14.58□□□□□ -0.08
STRC-203ENST00000440125 HNRNPMP52272 730 aaKnown RBP eCLIP14.57□□□□□ -0.08
STRC-203ENST00000440125 CNTLNQ9NXG0 1405 aa14.57□□□□□ -0.08
STRC-203ENST00000440125 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
STRC-203ENST00000440125 PDE4AP27815 886 aa14.57□□□□□ -0.08
STRC-203ENST00000440125 FTSJ3Q8IY81 847 aaKnown RBP14.57□□□□□ -0.08
STRC-203ENST00000440125 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
STRC-203ENST00000440125 MYBBP1AQ9BQG0 1328 aaKnown RBP14.56□□□□□ -0.08
STRC-203ENST00000440125 RRP1P56182 461 aaKnown RBP14.55□□□□□ -0.08
STRC-203ENST00000440125 KIF15Q9NS87 1388 aa14.55□□□□□ -0.08
STRC-203ENST00000440125 CASKIN1Q8WXD9 1431 aa14.55□□□□□ -0.08
STRC-203ENST00000440125 PDE3BQ13370 1112 aa14.55□□□□□ -0.08
STRC-203ENST00000440125 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
STRC-203ENST00000440125 NCOA2Q15596 1464 aa14.53□□□□□ -0.08
STRC-203ENST00000440125 TIAM1Q13009 1591 aa14.53□□□□□ -0.08
STRC-203ENST00000440125 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.08
STRC-203ENST00000440125 NBPF8Q3BBV2 869 aa14.52□□□□□ -0.09
STRC-203ENST00000440125 CCDC146Q8IYE0 955 aa14.51□□□□□ -0.09
STRC-203ENST00000440125 ARID4BQ4LE39 1312 aaPredicted RBP14.51□□□□□ -0.09
STRC-203ENST00000440125 SLKQ9H2G2 1235 aaPredicted RBP14.5□□□□□ -0.09
STRC-203ENST00000440125 PANK3Q9H999 370 aa14.5□□□□□ -0.09
STRC-203ENST00000440125 PRG4Q92954 1404 aaPredicted RBP14.5□□□□□ -0.09
STRC-203ENST00000440125 MSH5O43196 834 aa14.5□□□□□ -0.09
STRC-203ENST00000440125 GOLGA2Q08379 1002 aa14.49□□□□□ -0.09
STRC-203ENST00000440125 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
STRC-203ENST00000440125 U2SURPO15042 1029 aaKnown RBP14.49□□□□□ -0.09
STRC-203ENST00000440125 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
STRC-203ENST00000440125 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.49□□□□□ -0.09
STRC-203ENST00000440125 GLIPR1L2Q4G1C9 344 aa14.48□□□□□ -0.09
STRC-203ENST00000440125 TRIM44Q96DX7 344 aaPredicted RBP14.48□□□□□ -0.09
STRC-203ENST00000440125 MYH16Q9H6N6 1097 aa14.48□□□□□ -0.09
STRC-203ENST00000440125 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
STRC-203ENST00000440125 FYCO1Q9BQS8 1478 aa14.47□□□□□ -0.09
STRC-203ENST00000440125 MLECQ14165 292 aa14.47□□□□□ -0.09
STRC-203ENST00000440125 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
STRC-203ENST00000440125 HFM1A2PYH4 1435 aa14.46□□□□□ -0.09
STRC-203ENST00000440125 AKNAQ7Z591 1439 aa14.46□□□□□ -0.09
STRC-203ENST00000440125 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.1
STRC-203ENST00000440125 C11orf95C9JLR9 678 aaPredicted RBP14.44□□□□□ -0.1
STRC-203ENST00000440125 NCLP19338 710 aaKnown RBP14.44□□□□□ -0.1
STRC-203ENST00000440125 NAP1L5Q96NT1 182 aaPredicted RBP14.43□□□□□ -0.1
STRC-203ENST00000440125 CLUAP1Q96AJ1 413 aa14.42□□□□□ -0.1
STRC-203ENST00000440125 SAFB2Q14151 953 aaKnown RBP eCLIP14.42□□□□□ -0.1
STRC-203ENST00000440125 EFCAB2Q5VUJ9 269 aa14.42□□□□□ -0.1
STRC-203ENST00000440125 CDCA7LQ96GN5 454 aa14.42□□□□□ -0.1
STRC-203ENST00000440125 GOLGA6L22H0YM25 854 aa14.41□□□□□ -0.1
STRC-203ENST00000440125 NAIPQ13075 1403 aa14.41□□□□□ -0.1
STRC-203ENST00000440125 USP35Q9P2H5 1018 aa14.41□□□□□ -0.1
STRC-203ENST00000440125 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
STRC-203ENST00000440125 MS4A1P11836 297 aa14.4□□□□□ -0.1
STRC-203ENST00000440125 BIVM-ERCC5R4GMW8 1640 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms