RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
UBR3-205ENST00000439681 TCOF1Q13428 1488 aaKnown RBP11.43□□□□□ -0.58
UBR3-205ENST00000439681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBR3-205ENST00000439681 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
UBR3-205ENST00000439681 ARAP3Q8WWN8 1544 aa11.42□□□□□ -0.58
UBR3-205ENST00000439681 ARHGAP5Q13017 1502 aa11.41□□□□□ -0.58
UBR3-205ENST00000439681 CDC42BPAQ5VT25 1732 aa11.41□□□□□ -0.58
UBR3-205ENST00000439681 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
UBR3-205ENST00000439681 MAP3K4Q9Y6R4 1608 aa11.41□□□□□ -0.58
UBR3-205ENST00000439681 FANCAO15360 1455 aa11.41□□□□□ -0.58
UBR3-205ENST00000439681 HNRNPMP52272 730 aaKnown RBP eCLIP11.4□□□□□ -0.58
UBR3-205ENST00000439681 PTPN23Q9H3S7 1636 aa11.39□□□□□ -0.59
UBR3-205ENST00000439681 CAMSAP2Q08AD1 1489 aa11.39□□□□□ -0.59
UBR3-205ENST00000439681 CDC42BPBQ9Y5S2 1711 aa11.39□□□□□ -0.59
UBR3-205ENST00000439681 AKNAQ7Z591 1439 aa11.39□□□□□ -0.59
UBR3-205ENST00000439681 KIAA1107Q9UPP5 1409 aa11.39□□□□□ -0.59
UBR3-205ENST00000439681 ITSN2Q9NZM3 1697 aa11.38□□□□□ -0.59
UBR3-205ENST00000439681 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
UBR3-205ENST00000439681 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
UBR3-205ENST00000439681 ARHGEF12Q9NZN5 1544 aa11.38□□□□□ -0.59
UBR3-205ENST00000439681 SAMD9LQ8IVG5 1584 aa11.37□□□□□ -0.59
UBR3-205ENST00000439681 NEO1Q92859 1461 aa11.37□□□□□ -0.59
UBR3-205ENST00000439681 KIF13AQ9H1H9 1805 aa11.37□□□□□ -0.59
UBR3-205ENST00000439681 ITGAEP38570 1179 aa11.37□□□□□ -0.59
UBR3-205ENST00000439681 ABCC5O15440 1437 aa11.37□□□□□ -0.59
UBR3-205ENST00000439681 PTPRKQ15262 1439 aa11.37□□□□□ -0.59
UBR3-205ENST00000439681 RSPH4AQ5TD94 716 aa11.36□□□□□ -0.59
UBR3-205ENST00000439681 PLEKHH2Q8IVE3 1493 aa11.36□□□□□ -0.59
UBR3-205ENST00000439681 SCAPERQ9BY12 1400 aa11.36□□□□□ -0.59
UBR3-205ENST00000439681 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
UBR3-205ENST00000439681 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
UBR3-205ENST00000439681 AFAP1Q8N556 730 aa11.35□□□□□ -0.59
UBR3-205ENST00000439681 ADGRL1O94910 1474 aa11.35□□□□□ -0.59
UBR3-205ENST00000439681 TEX14Q8IWB6 1497 aa11.35□□□□□ -0.59
UBR3-205ENST00000439681 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
UBR3-205ENST00000439681 DAPK1P53355 1430 aa11.34□□□□□ -0.59
UBR3-205ENST00000439681 ABCC1P33527 1531 aa11.34□□□□□ -0.59
UBR3-205ENST00000439681 SYCP2Q9BX26 1530 aa11.33□□□□□ -0.6
UBR3-205ENST00000439681 RAPGEF3O95398 923 aa11.33□□□□□ -0.6
UBR3-205ENST00000439681 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
UBR3-205ENST00000439681 COL17A1Q9UMD9 1497 aaPredicted RBP11.32□□□□□ -0.6
UBR3-205ENST00000439681 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
UBR3-205ENST00000439681 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
UBR3-205ENST00000439681 ARHGEF5Q12774 1597 aa11.31□□□□□ -0.6
UBR3-205ENST00000439681 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
UBR3-205ENST00000439681 DENND4BO75064 1496 aaPredicted RBP11.31□□□□□ -0.6
UBR3-205ENST00000439681 CFAP74Q9C0B2 1584 aa11.3□□□□□ -0.6
UBR3-205ENST00000439681 POGZQ7Z3K3 1410 aa11.3□□□□□ -0.6
UBR3-205ENST00000439681 DNMT1P26358 1616 aaKnown RBP11.3□□□□□ -0.6
UBR3-205ENST00000439681 TSPOAP1O95153 1857 aa11.29□□□□□ -0.6
UBR3-205ENST00000439681 SPAG9O60271 1321 aaKnown RBP11.29□□□□□ -0.6
UBR3-205ENST00000439681 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
UBR3-205ENST00000439681 ZNF518AQ6AHZ1 1483 aa11.27□□□□□ -0.6
UBR3-205ENST00000439681 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.6
UBR3-205ENST00000439681 ROCK1Q13464 1354 aa11.27□□□□□ -0.6
UBR3-205ENST00000439681 RRP7BPQ9NSQ0 103 aa11.27□□□□□ -0.6
UBR3-205ENST00000439681 NCOA1Q15788 1441 aa11.27□□□□□ -0.61
UBR3-205ENST00000439681 RTEL1-TNFRSF6BF6WH68 1400 aa11.27□□□□□ -0.61
UBR3-205ENST00000439681 ADGRL2O95490 1459 aa11.26□□□□□ -0.61
UBR3-205ENST00000439681 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
UBR3-205ENST00000439681 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
UBR3-205ENST00000439681 KDM5CP41229 1560 aa11.25□□□□□ -0.61
UBR3-205ENST00000439681 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
UBR3-205ENST00000439681 MAST1Q9Y2H9 1570 aa11.24□□□□□ -0.61
UBR3-205ENST00000439681 HFM1A2PYH4 1435 aa11.24□□□□□ -0.61
UBR3-205ENST00000439681 NAIPQ13075 1403 aa11.24□□□□□ -0.61
UBR3-205ENST00000439681 MYT1LQ9UL68 1186 aa11.23□□□□□ -0.61
UBR3-205ENST00000439681 KIF15Q9NS87 1388 aa11.22□□□□□ -0.61
UBR3-205ENST00000439681 SETD5Q9C0A6 1442 aa11.22□□□□□ -0.61
UBR3-205ENST00000439681 ZFYVE16Q7Z3T8 1539 aa11.22□□□□□ -0.61
UBR3-205ENST00000439681 CROCC2H7BZ55 1655 aa11.22□□□□□ -0.61
UBR3-205ENST00000439681 RICTORQ6R327 1708 aa11.21□□□□□ -0.61
UBR3-205ENST00000439681 ATP7AQ04656 1500 aa11.21□□□□□ -0.62
UBR3-205ENST00000439681 YEATS2Q9ULM3 1422 aa11.21□□□□□ -0.62
UBR3-205ENST00000439681 INO80Q9ULG1 1556 aaPredicted RBP11.2□□□□□ -0.62
UBR3-205ENST00000439681 ZMYM4Q5VZL5 1548 aa11.2□□□□□ -0.62
UBR3-205ENST00000439681 MAGI2Q86UL8 1455 aa11.2□□□□□ -0.62
UBR3-205ENST00000439681 HRCP23327 699 aa11.2□□□□□ -0.62
UBR3-205ENST00000439681 DHX29Q7Z478 1369 aaKnown RBP11.19□□□□□ -0.62
UBR3-205ENST00000439681 RAB3GAP2Q9H2M9 1393 aa11.19□□□□□ -0.62
UBR3-205ENST00000439681 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
UBR3-205ENST00000439681 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
UBR3-205ENST00000439681 PLXNC1O60486 1568 aa11.18□□□□□ -0.62
UBR3-205ENST00000439681 HECW2Q9P2P5 1572 aa11.18□□□□□ -0.62
UBR3-205ENST00000439681 KDM6BO15054 1643 aa11.18□□□□□ -0.62
UBR3-205ENST00000439681 DUOX2Q9NRD8 1548 aa11.16□□□□□ -0.62
UBR3-205ENST00000439681 ATP10AO60312 1499 aa11.16□□□□□ -0.62
UBR3-205ENST00000439681 A2MP01023 1474 aa11.16□□□□□ -0.62
UBR3-205ENST00000439681 ADGBQ8N7X0 1667 aa11.16□□□□□ -0.62
UBR3-205ENST00000439681 DIP2CQ9Y2E4 1556 aa11.15□□□□□ -0.62
UBR3-205ENST00000439681 ERBINQ96RT1 1412 aa11.15□□□□□ -0.63
UBR3-205ENST00000439681 ABCA6Q8N139 1617 aa11.14□□□□□ -0.63
UBR3-205ENST00000439681 KIF3BO15066 747 aa11.14□□□□□ -0.63
UBR3-205ENST00000439681 GCC2Q8IWJ2 1684 aa11.12□□□□□ -0.63
UBR3-205ENST00000439681 TRIM52Q96A61 297 aa11.11□□□□□ -0.63
UBR3-205ENST00000439681 ARHGEF40Q8TER5 1519 aa11.11□□□□□ -0.63
UBR3-205ENST00000439681 ACIN1Q9UKV3 1341 aaKnown RBP11.11□□□□□ -0.63
UBR3-205ENST00000439681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.1□□□□□ -0.631e-6■■□□□ 11.9
UBR3-205ENST00000439681 REREQ9P2R6 1566 aa11.1□□□□□ -0.63
UBR3-205ENST00000439681 NUP155O75694 1391 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 1366.8 ms