RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
PCNX3-202ENST00000439247 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
PCNX3-202ENST00000439247 PTPRGP23470 1445 aa18.77■□□□□ 0.6
PCNX3-202ENST00000439247 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
PCNX3-202ENST00000439247 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
PCNX3-202ENST00000439247 MTUS2Q5JR59 1369 aa18.73■□□□□ 0.59
PCNX3-202ENST00000439247 FAM9BQ8IZU0 186 aa18.73■□□□□ 0.59
PCNX3-202ENST00000439247 CCDC18Q5T9S5 1454 aa18.73■□□□□ 0.59
PCNX3-202ENST00000439247 HSPA5P11021 654 aaKnown RBP18.72■□□□□ 0.59
PCNX3-202ENST00000439247 ABCA8O94911 1581 aa18.71■□□□□ 0.59
PCNX3-202ENST00000439247 PPP4R2Q9NY27 417 aa18.7■□□□□ 0.58
PCNX3-202ENST00000439247 DEKP35659 375 aaKnown RBP18.69■□□□□ 0.58
PCNX3-202ENST00000439247 NBR1Q14596 966 aa18.68■□□□□ 0.58
PCNX3-202ENST00000439247 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
PCNX3-202ENST00000439247 C11orf95C9JLR9 678 aaPredicted RBP18.66■□□□□ 0.58
PCNX3-202ENST00000439247 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
PCNX3-202ENST00000439247 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
PCNX3-202ENST00000439247 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
PCNX3-202ENST00000439247 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
PCNX3-202ENST00000439247 UACAQ9BZF9 1416 aa18.65■□□□□ 0.58
PCNX3-202ENST00000439247 ATP10BO94823 1461 aa18.64■□□□□ 0.57
PCNX3-202ENST00000439247 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
PCNX3-202ENST00000439247 CHIC2Q9UKJ5 165 aa18.63■□□□□ 0.57
PCNX3-202ENST00000439247 NCOA2Q15596 1464 aa18.63■□□□□ 0.57
PCNX3-202ENST00000439247 EHBP1L1Q8N3D4 1523 aa18.63■□□□□ 0.57
PCNX3-202ENST00000439247 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
PCNX3-202ENST00000439247 PTPN23Q9H3S7 1636 aa18.61■□□□□ 0.57
PCNX3-202ENST00000439247 FOXD1Q16676 465 aa18.6■□□□□ 0.57
PCNX3-202ENST00000439247 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
PCNX3-202ENST00000439247 NAIPQ13075 1403 aa18.6■□□□□ 0.57
PCNX3-202ENST00000439247 SUPT6HQ7KZ85 1726 aaKnown RBP18.58■□□□□ 0.56
PCNX3-202ENST00000439247 PRKRIP1Q9H875 184 aaPredicted RBP18.58■□□□□ 0.56
PCNX3-202ENST00000439247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.56
PCNX3-202ENST00000439247 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
PCNX3-202ENST00000439247 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
PCNX3-202ENST00000439247 ARHGEF11O15085 1522 aa18.55■□□□□ 0.56
PCNX3-202ENST00000439247 NOP58Q9Y2X3 529 aaKnown RBP18.55■□□□□ 0.56
PCNX3-202ENST00000439247 KIF14Q15058 1648 aa18.54■□□□□ 0.56
PCNX3-202ENST00000439247 TROQ12816 1431 aaPredicted RBP18.54■□□□□ 0.56
PCNX3-202ENST00000439247 CNTLNQ9NXG0 1405 aa18.54■□□□□ 0.56
PCNX3-202ENST00000439247 ERICH6BQ5W0A0 696 aa18.54■□□□□ 0.56
PCNX3-202ENST00000439247 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
PCNX3-202ENST00000439247 MYOM3Q5VTT5 1437 aa18.52■□□□□ 0.56
PCNX3-202ENST00000439247 L3MBTL2Q969R5 705 aa18.52■□□□□ 0.56
PCNX3-202ENST00000439247 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
PCNX3-202ENST00000439247 AKNAQ7Z591 1439 aa18.51■□□□□ 0.55
PCNX3-202ENST00000439247 DENND4BO75064 1496 aaPredicted RBP18.51■□□□□ 0.55
PCNX3-202ENST00000439247 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
PCNX3-202ENST00000439247 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
PCNX3-202ENST00000439247 ZCCHC11Q5TAX3 1644 aaKnown RBP18.47■□□□□ 0.55
PCNX3-202ENST00000439247 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
PCNX3-202ENST00000439247 ZNF644Q9H582 1327 aaPredicted RBP18.46■□□□□ 0.55
PCNX3-202ENST00000439247 NBPF8Q3BBV2 869 aa18.46■□□□□ 0.55
PCNX3-202ENST00000439247 KDM6BO15054 1643 aa18.46■□□□□ 0.54
PCNX3-202ENST00000439247 POLR3GLQ9BT43 218 aa18.44■□□□□ 0.54
PCNX3-202ENST00000439247 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
PCNX3-202ENST00000439247 MPHOSPH9Q99550 1183 aa18.43■□□□□ 0.54
PCNX3-202ENST00000439247 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
PCNX3-202ENST00000439247 NCOA1Q15788 1441 aa18.42■□□□□ 0.54
PCNX3-202ENST00000439247 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
PCNX3-202ENST00000439247 GPATCH8Q9UKJ3 1502 aaKnown RBP18.41■□□□□ 0.54
PCNX3-202ENST00000439247 CCDC136Q96JN2 1154 aa18.41■□□□□ 0.54
PCNX3-202ENST00000439247 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
PCNX3-202ENST00000439247 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
PCNX3-202ENST00000439247 RIMBP3CA6NJZ7 1639 aa18.4■□□□□ 0.54
PCNX3-202ENST00000439247 RIMBP3BA6NNM3 1639 aa18.4■□□□□ 0.54
PCNX3-202ENST00000439247 RIMBP3Q9UFD9 1639 aa18.4■□□□□ 0.54
PCNX3-202ENST00000439247 CFDP1Q9UEE9 299 aaPredicted RBP18.38■□□□□ 0.53
PCNX3-202ENST00000439247 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
PCNX3-202ENST00000439247 MIA2Q96PC5 1412 aa18.36■□□□□ 0.53
PCNX3-202ENST00000439247 TTC37Q6PGP7 1564 aa18.36■□□□□ 0.53
PCNX3-202ENST00000439247 IPO9Q96P70 1041 aaKnown RBP18.36■□□□□ 0.53
PCNX3-202ENST00000439247 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
PCNX3-202ENST00000439247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCNX3-202ENST00000439247 ANP32AP39687 249 aaKnown RBP18.35■□□□□ 0.53
PCNX3-202ENST00000439247 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
PCNX3-202ENST00000439247 NPM2Q86SE8 214 aaKnown RBP18.34■□□□□ 0.53
PCNX3-202ENST00000439247 ZBTB47Q9UFB7 747 aaPredicted RBP18.33■□□□□ 0.53
PCNX3-202ENST00000439247 NUDCQ9Y266 331 aa18.33■□□□□ 0.52
PCNX3-202ENST00000439247 RTN4Q9NQC3 1192 aaKnown RBP18.32■□□□□ 0.52
PCNX3-202ENST00000439247 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
PCNX3-202ENST00000439247 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
PCNX3-202ENST00000439247 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
PCNX3-202ENST00000439247 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
PCNX3-202ENST00000439247 ZNF326Q5BKZ1 582 aaKnown RBP18.31■□□□□ 0.52
PCNX3-202ENST00000439247 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
PCNX3-202ENST00000439247 ITSN2Q9NZM3 1697 aa18.3■□□□□ 0.52
PCNX3-202ENST00000439247 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
PCNX3-202ENST00000439247 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
PCNX3-202ENST00000439247 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
PCNX3-202ENST00000439247 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.52
PCNX3-202ENST00000439247 SPATA31E1Q6ZUB1 1445 aa18.27■□□□□ 0.51
PCNX3-202ENST00000439247 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.51
PCNX3-202ENST00000439247 ABCC5O15440 1437 aa18.26■□□□□ 0.51
PCNX3-202ENST00000439247 GCC2Q8IWJ2 1684 aa18.26■□□□□ 0.51
PCNX3-202ENST00000439247 DHX29Q7Z478 1369 aaKnown RBP18.25■□□□□ 0.51
PCNX3-202ENST00000439247 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.51
PCNX3-202ENST00000439247 DAPK1P53355 1430 aa18.25■□□□□ 0.51
PCNX3-202ENST00000439247 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
PCNX3-202ENST00000439247 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms