RNA–Protein interactions for RNA: ENST00000439200.5

CHEK2-216, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 906 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-216ENST00000439200 SCAPERQ9BY12 1400 aa22.05■■□□□ 1.12
CHEK2-216ENST00000439200 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
CHEK2-216ENST00000439200 HSPA2P54652 639 aa22.03■■□□□ 1.12
CHEK2-216ENST00000439200 MLECQ14165 292 aa22.03■■□□□ 1.12
CHEK2-216ENST00000439200 UBTFP17480 764 aaKnown RBP22.01■■□□□ 1.11
CHEK2-216ENST00000439200 FER1L4A9Z1Z3 1794 aa22■■□□□ 1.11
CHEK2-216ENST00000439200 FMN1Q68DA7 1419 aa22■■□□□ 1.11
CHEK2-216ENST00000439200 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
CHEK2-216ENST00000439200 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
CHEK2-216ENST00000439200 KIF14Q15058 1648 aa21.99■■□□□ 1.11
CHEK2-216ENST00000439200 EFCAB2Q5VUJ9 269 aa21.95■■□□□ 1.1
CHEK2-216ENST00000439200 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
CHEK2-216ENST00000439200 ATP10AO60312 1499 aa21.95■■□□□ 1.1
CHEK2-216ENST00000439200 ARHGEF12Q9NZN5 1544 aa21.94■■□□□ 1.1
CHEK2-216ENST00000439200 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
CHEK2-216ENST00000439200 ARHGAP5Q13017 1502 aa21.91■■□□□ 1.1
CHEK2-216ENST00000439200 TROQ12816 1431 aaPredicted RBP21.91■■□□□ 1.1
CHEK2-216ENST00000439200 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
CHEK2-216ENST00000439200 ZNF518AQ6AHZ1 1483 aa21.9■■□□□ 1.1
CHEK2-216ENST00000439200 KDM5CP41229 1560 aa21.88■■□□□ 1.09
CHEK2-216ENST00000439200 CLIP1P30622 1438 aa21.88■■□□□ 1.09
CHEK2-216ENST00000439200 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
CHEK2-216ENST00000439200 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
CHEK2-216ENST00000439200 CEBPAP49715 358 aaPredicted RBP21.85■■□□□ 1.09
CHEK2-216ENST00000439200 DIP2CQ9Y2E4 1556 aa21.84■■□□□ 1.09
CHEK2-216ENST00000439200 CDC42BPBQ9Y5S2 1711 aa21.83■■□□□ 1.08
CHEK2-216ENST00000439200 MYT1LQ9UL68 1186 aa21.82■■□□□ 1.08
CHEK2-216ENST00000439200 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
CHEK2-216ENST00000439200 CERKQ8TCT0 537 aa21.8■■□□□ 1.08
CHEK2-216ENST00000439200 PREX2Q70Z35 1606 aa21.8■■□□□ 1.08
CHEK2-216ENST00000439200 REREQ9P2R6 1566 aa21.78■■□□□ 1.08
CHEK2-216ENST00000439200 ABCC1P33527 1531 aa21.78■■□□□ 1.08
CHEK2-216ENST00000439200 TRAPPC8Q9Y2L5 1435 aa21.77■■□□□ 1.08
CHEK2-216ENST00000439200 MLH3Q9UHC1 1453 aa21.77■■□□□ 1.07
CHEK2-216ENST00000439200 CASKIN1Q8WXD9 1431 aa21.76■■□□□ 1.07
CHEK2-216ENST00000439200 CCDC18Q5T9S5 1454 aa21.76■■□□□ 1.07
CHEK2-216ENST00000439200 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
CHEK2-216ENST00000439200 UHRF1BP1Q6BDS2 1440 aa21.75■■□□□ 1.07
CHEK2-216ENST00000439200 STRCQ7RTU9 1775 aa21.74■■□□□ 1.07
CHEK2-216ENST00000439200 C3P01024 1663 aa21.72■■□□□ 1.07
CHEK2-216ENST00000439200 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
CHEK2-216ENST00000439200 AGLP35573 1532 aa21.7■■□□□ 1.07
CHEK2-216ENST00000439200 KIDINS220Q9ULH0 1771 aa21.69■■□□□ 1.06
CHEK2-216ENST00000439200 FYCO1Q9BQS8 1478 aa21.67■■□□□ 1.06
CHEK2-216ENST00000439200 ESF1Q9H501 851 aaKnown RBP21.66■■□□□ 1.06
CHEK2-216ENST00000439200 DMRT2Q9Y5R5 561 aa21.66■■□□□ 1.06
CHEK2-216ENST00000439200 SETD1BQ9UPS6 1966 aaKnown RBP21.65■■□□□ 1.06
CHEK2-216ENST00000439200 SAMD9LQ8IVG5 1584 aa21.64■■□□□ 1.05
CHEK2-216ENST00000439200 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
CHEK2-216ENST00000439200 SYCP2Q9BX26 1530 aa21.63■■□□□ 1.05
CHEK2-216ENST00000439200 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
CHEK2-216ENST00000439200 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
CHEK2-216ENST00000439200 PTPRTO14522 1441 aa21.59■■□□□ 1.05
CHEK2-216ENST00000439200 HNRNPMP52272 730 aaKnown RBP eCLIP21.57■■□□□ 1.04
CHEK2-216ENST00000439200 SPAG9O60271 1321 aaKnown RBP21.56■■□□□ 1.04
CHEK2-216ENST00000439200 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
CHEK2-216ENST00000439200 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
CHEK2-216ENST00000439200 MROH2AA6NES4 1674 aa21.55■■□□□ 1.04
CHEK2-216ENST00000439200 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
CHEK2-216ENST00000439200 INO80Q9ULG1 1556 aaPredicted RBP21.53■■□□□ 1.04
CHEK2-216ENST00000439200 NPATQ14207 1427 aa21.52■■□□□ 1.04
CHEK2-216ENST00000439200 CAMSAP1Q5T5Y3 1602 aa21.51■■□□□ 1.03
CHEK2-216ENST00000439200 LTBP4Q8N2S1 1624 aa21.51■■□□□ 1.03
CHEK2-216ENST00000439200 KIAA1107Q9UPP5 1409 aa21.51■■□□□ 1.03
CHEK2-216ENST00000439200 PLXNC1O60486 1568 aa21.51■■□□□ 1.03
CHEK2-216ENST00000439200 CLTCQ00610 1675 aaKnown RBP21.5■■□□□ 1.03
CHEK2-216ENST00000439200 ZMYM3Q14202 1370 aa21.5■■□□□ 1.03
CHEK2-216ENST00000439200 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
CHEK2-216ENST00000439200 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
CHEK2-216ENST00000439200 PLEKHH2Q8IVE3 1493 aa21.5■■□□□ 1.03
CHEK2-216ENST00000439200 A2MP01023 1474 aa21.48■■□□□ 1.03
CHEK2-216ENST00000439200 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
CHEK2-216ENST00000439200 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
CHEK2-216ENST00000439200 MYO3AQ8NEV4 1616 aa21.45■■□□□ 1.02
CHEK2-216ENST00000439200 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
CHEK2-216ENST00000439200 GGT6Q6P531 493 aa21.43■■□□□ 1.02
CHEK2-216ENST00000439200 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
CHEK2-216ENST00000439200 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
CHEK2-216ENST00000439200 PTPRKQ15262 1439 aa21.42■■□□□ 1.02
CHEK2-216ENST00000439200 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
CHEK2-216ENST00000439200 ILDR2Q71H61 639 aa21.42■■□□□ 1.02
CHEK2-216ENST00000439200 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
CHEK2-216ENST00000439200 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
CHEK2-216ENST00000439200 CEP170BQ9Y4F5 1589 aaPredicted RBP21.4■■□□□ 1.02
CHEK2-216ENST00000439200 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.02
CHEK2-216ENST00000439200 SPATA31D1Q6ZQQ2 1576 aa21.39■■□□□ 1.01
CHEK2-216ENST00000439200 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
CHEK2-216ENST00000439200 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
CHEK2-216ENST00000439200 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
CHEK2-216ENST00000439200 TCOF1Q13428 1488 aaKnown RBP21.36■■□□□ 1.01
CHEK2-216ENST00000439200 PKD2Q13563 968 aa21.34■■□□□ 1.01
CHEK2-216ENST00000439200 CEP162Q5TB80 1403 aa21.34■■□□□ 1.01
CHEK2-216ENST00000439200 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
CHEK2-216ENST00000439200 RTEL1-TNFRSF6BF6WH68 1400 aa21.31■■□□□ 1
CHEK2-216ENST00000439200 DHX29Q7Z478 1369 aaKnown RBP21.3■■□□□ 1
CHEK2-216ENST00000439200 A2ML1A8K2U0 1454 aa21.3■■□□□ 1
CHEK2-216ENST00000439200 UBAP1LF5GYI3 381 aa21.29■■□□□ 1
CHEK2-216ENST00000439200 SOCS7O14512 581 aa21.29■■□□□ 1
CHEK2-216ENST00000439200 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
CHEK2-216ENST00000439200 CAMSAP2Q08AD1 1489 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms