RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ABCC5O15440 1437 aa17.16■□□□□ 0.34
HDAC8-214ENST00000439122 CARMIL2Q6F5E8 1435 aa17.15■□□□□ 0.34
HDAC8-214ENST00000439122 ROCK1Q13464 1354 aa17.15■□□□□ 0.34
HDAC8-214ENST00000439122 DNMT1P26358 1616 aaKnown RBP17.15■□□□□ 0.34
HDAC8-214ENST00000439122 TROQ12816 1431 aaPredicted RBP17.15■□□□□ 0.34
HDAC8-214ENST00000439122 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
HDAC8-214ENST00000439122 FOXD1Q16676 465 aa17.14■□□□□ 0.33
HDAC8-214ENST00000439122 NUP160Q12769 1436 aa17.13■□□□□ 0.33
HDAC8-214ENST00000439122 ANP32CO43423 234 aa17.13■□□□□ 0.33
HDAC8-214ENST00000439122 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
HDAC8-214ENST00000439122 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-214ENST00000439122 CAMSAP2Q08AD1 1489 aa17.08■□□□□ 0.33
HDAC8-214ENST00000439122 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
HDAC8-214ENST00000439122 KIF14Q15058 1648 aa17.07■□□□□ 0.32
HDAC8-214ENST00000439122 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
HDAC8-214ENST00000439122 L3MBTL2Q969R5 705 aa17.07■□□□□ 0.32
HDAC8-214ENST00000439122 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
HDAC8-214ENST00000439122 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
HDAC8-214ENST00000439122 ANKRD30BQ9BXX2 1392 aa17.05■□□□□ 0.32
HDAC8-214ENST00000439122 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
HDAC8-214ENST00000439122 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
HDAC8-214ENST00000439122 PLEKHD1A6NEE1 506 aa17.04■□□□□ 0.32
HDAC8-214ENST00000439122 HSPA5P11021 654 aaKnown RBP17.04■□□□□ 0.32
HDAC8-214ENST00000439122 EIF4G2P78344 907 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC8-214ENST00000439122 NCOA1Q15788 1441 aa17.02■□□□□ 0.31
HDAC8-214ENST00000439122 RPRD2Q5VT52 1461 aaKnown RBP17.01■□□□□ 0.31
HDAC8-214ENST00000439122 ABCA8O94911 1581 aa17.01■□□□□ 0.31
HDAC8-214ENST00000439122 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
HDAC8-214ENST00000439122 ADGBQ8N7X0 1667 aa16.99■□□□□ 0.31
HDAC8-214ENST00000439122 ATP10BO94823 1461 aa16.99■□□□□ 0.31
HDAC8-214ENST00000439122 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
HDAC8-214ENST00000439122 ADGRL2O95490 1459 aa16.96■□□□□ 0.31
HDAC8-214ENST00000439122 PZPP20742 1482 aa16.96■□□□□ 0.31
HDAC8-214ENST00000439122 CROCC2H7BZ55 1655 aa16.96■□□□□ 0.31
HDAC8-214ENST00000439122 TEX14Q8IWB6 1497 aa16.96■□□□□ 0.3
HDAC8-214ENST00000439122 CDC42BPAQ5VT25 1732 aa16.95■□□□□ 0.3
HDAC8-214ENST00000439122 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
HDAC8-214ENST00000439122 PTPRGP23470 1445 aa16.94■□□□□ 0.3
HDAC8-214ENST00000439122 ABCC10Q5T3U5 1492 aa16.94■□□□□ 0.3
HDAC8-214ENST00000439122 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
HDAC8-214ENST00000439122 PKD2Q13563 968 aa16.91■□□□□ 0.3
HDAC8-214ENST00000439122 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
HDAC8-214ENST00000439122 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
HDAC8-214ENST00000439122 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
HDAC8-214ENST00000439122 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
HDAC8-214ENST00000439122 C11orf95C9JLR9 678 aaPredicted RBP16.89■□□□□ 0.29
HDAC8-214ENST00000439122 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
HDAC8-214ENST00000439122 HNRNPMP52272 730 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC8-214ENST00000439122 CCDC7Q96M83 1385 aa16.87■□□□□ 0.29
HDAC8-214ENST00000439122 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
HDAC8-214ENST00000439122 NUP155O75694 1391 aa16.86■□□□□ 0.29
HDAC8-214ENST00000439122 CHD1O14646 1710 aa16.86■□□□□ 0.29
HDAC8-214ENST00000439122 FKBP8Q14318 412 aa16.84■□□□□ 0.29
HDAC8-214ENST00000439122 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
HDAC8-214ENST00000439122 SPATA31E1Q6ZUB1 1445 aa16.83■□□□□ 0.28
HDAC8-214ENST00000439122 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
HDAC8-214ENST00000439122 BCANQ96GW7 911 aa16.81■□□□□ 0.28
HDAC8-214ENST00000439122 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC8-214ENST00000439122 KIF7Q2M1P5 1343 aa16.81■□□□□ 0.28
HDAC8-214ENST00000439122 MBD5Q9P267 1494 aa16.8■□□□□ 0.28
HDAC8-214ENST00000439122 ARHGEF5Q12774 1597 aa16.8■□□□□ 0.28
HDAC8-214ENST00000439122 NEFLP07196 543 aa16.8■□□□□ 0.28
HDAC8-214ENST00000439122 SAMD9LQ8IVG5 1584 aa16.79■□□□□ 0.28
HDAC8-214ENST00000439122 CDC42BPBQ9Y5S2 1711 aa16.78■□□□□ 0.28
HDAC8-214ENST00000439122 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
HDAC8-214ENST00000439122 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
HDAC8-214ENST00000439122 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-214ENST00000439122 SHROOM2Q13796 1616 aa16.76■□□□□ 0.27
HDAC8-214ENST00000439122 USP47Q96K76 1375 aa16.76■□□□□ 0.27
HDAC8-214ENST00000439122 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
HDAC8-214ENST00000439122 KDM5DQ9BY66 1539 aa16.76■□□□□ 0.27
HDAC8-214ENST00000439122 POLR1AO95602 1720 aaPredicted RBP16.75■□□□□ 0.27
HDAC8-214ENST00000439122 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
HDAC8-214ENST00000439122 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
HDAC8-214ENST00000439122 ARHGAP5Q13017 1502 aa16.74■□□□□ 0.27
HDAC8-214ENST00000439122 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
HDAC8-214ENST00000439122 POLR3GLQ9BT43 218 aa16.73■□□□□ 0.27
HDAC8-214ENST00000439122 SYCP2Q9BX26 1530 aa16.73■□□□□ 0.27
HDAC8-214ENST00000439122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC8-214ENST00000439122 MRS2Q9HD23 443 aa16.71■□□□□ 0.27
HDAC8-214ENST00000439122 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
HDAC8-214ENST00000439122 ABCC2Q92887 1545 aa16.71■□□□□ 0.27
HDAC8-214ENST00000439122 UHRF1BP1Q6BDS2 1440 aa16.71■□□□□ 0.27
HDAC8-214ENST00000439122 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
HDAC8-214ENST00000439122 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
HDAC8-214ENST00000439122 DCAF11Q8TEB1 546 aa16.69■□□□□ 0.26
HDAC8-214ENST00000439122 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
HDAC8-214ENST00000439122 ARHGEF12Q9NZN5 1544 aa16.69■□□□□ 0.26
HDAC8-214ENST00000439122 KDM5CP41229 1560 aa16.69■□□□□ 0.26
HDAC8-214ENST00000439122 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
HDAC8-214ENST00000439122 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
HDAC8-214ENST00000439122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC8-214ENST00000439122 MYO5CQ9NQX4 1742 aa16.66■□□□□ 0.26
HDAC8-214ENST00000439122 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
HDAC8-214ENST00000439122 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
HDAC8-214ENST00000439122 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
HDAC8-214ENST00000439122 PLEKHH2Q8IVE3 1493 aa16.64■□□□□ 0.25
HDAC8-214ENST00000439122 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
HDAC8-214ENST00000439122 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
HDAC8-214ENST00000439122 DHX29Q7Z478 1369 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms