RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
LINC00163-202ENST00000439088 CDC42BPAQ5VT25 1732 aa22■■□□□ 1.11
LINC00163-202ENST00000439088 ROCK1Q13464 1354 aa22■■□□□ 1.11
LINC00163-202ENST00000439088 GCC2Q8IWJ2 1684 aa21.98■■□□□ 1.11
LINC00163-202ENST00000439088 KDM5BQ9UGL1 1544 aa21.97■■□□□ 1.11
LINC00163-202ENST00000439088 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
LINC00163-202ENST00000439088 ACIN1Q9UKV3 1341 aaKnown RBP21.93■■□□□ 1.1
LINC00163-202ENST00000439088 ZCCHC11Q5TAX3 1644 aaKnown RBP21.93■■□□□ 1.1
LINC00163-202ENST00000439088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.88■■□□□ 1.09
LINC00163-202ENST00000439088 PREX2Q70Z35 1606 aa21.88■■□□□ 1.09
LINC00163-202ENST00000439088 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
LINC00163-202ENST00000439088 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
LINC00163-202ENST00000439088 ADGRL2O95490 1459 aa21.86■■□□□ 1.09
LINC00163-202ENST00000439088 CROCC2H7BZ55 1655 aa21.86■■□□□ 1.09
LINC00163-202ENST00000439088 KDM6BO15054 1643 aa21.86■■□□□ 1.09
LINC00163-202ENST00000439088 NCOA1Q15788 1441 aa21.85■■□□□ 1.09
LINC00163-202ENST00000439088 TIMELESSQ9UNS1 1208 aa21.85■■□□□ 1.09
LINC00163-202ENST00000439088 TTC37Q6PGP7 1564 aa21.85■■□□□ 1.09
LINC00163-202ENST00000439088 KCNH8Q96L42 1107 aa21.85■■□□□ 1.09
LINC00163-202ENST00000439088 ADGBQ8N7X0 1667 aa21.84■■□□□ 1.09
LINC00163-202ENST00000439088 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
LINC00163-202ENST00000439088 RSPH4AQ5TD94 716 aa21.83■■□□□ 1.08
LINC00163-202ENST00000439088 SHANK2Q9UPX8 1470 aa21.82■■□□□ 1.08
LINC00163-202ENST00000439088 ARHGEF5Q12774 1597 aa21.82■■□□□ 1.08
LINC00163-202ENST00000439088 TRIM52Q96A61 297 aa21.82■■□□□ 1.08
LINC00163-202ENST00000439088 ANKRD30AQ9BXX3 1397 aa21.82■■□□□ 1.08
LINC00163-202ENST00000439088 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
LINC00163-202ENST00000439088 SAMD9LQ8IVG5 1584 aa21.81■■□□□ 1.08
LINC00163-202ENST00000439088 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
LINC00163-202ENST00000439088 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
LINC00163-202ENST00000439088 HNRNPMP52272 730 aaKnown RBP eCLIP21.8■■□□□ 1.08
LINC00163-202ENST00000439088 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
LINC00163-202ENST00000439088 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
LINC00163-202ENST00000439088 ARHGAP5Q13017 1502 aa21.79■■□□□ 1.08
LINC00163-202ENST00000439088 PLCH2O75038 1416 aa21.77■■□□□ 1.08
LINC00163-202ENST00000439088 C9orf84Q5VXU9 1444 aa21.77■■□□□ 1.08
LINC00163-202ENST00000439088 MPHOSPH9Q99550 1183 aa21.76■■□□□ 1.07
LINC00163-202ENST00000439088 PLEKHH2Q8IVE3 1493 aa21.75■■□□□ 1.07
LINC00163-202ENST00000439088 KIAA1107Q9UPP5 1409 aa21.75■■□□□ 1.07
LINC00163-202ENST00000439088 CCDC141Q6ZP82 1450 aa21.75■■□□□ 1.07
LINC00163-202ENST00000439088 WDR7Q9Y4E6 1490 aa21.75■■□□□ 1.07
LINC00163-202ENST00000439088 DENND4BO75064 1496 aaPredicted RBP21.74■■□□□ 1.07
LINC00163-202ENST00000439088 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
LINC00163-202ENST00000439088 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
LINC00163-202ENST00000439088 ANKRD50Q9ULJ7 1429 aa21.7■■□□□ 1.07
LINC00163-202ENST00000439088 NPM1P06748 294 aaKnown RBP eCLIP21.7■■□□□ 1.06
LINC00163-202ENST00000439088 SYCP2Q9BX26 1530 aa21.7■■□□□ 1.06
LINC00163-202ENST00000439088 ARAP3Q8WWN8 1544 aa21.69■■□□□ 1.06
LINC00163-202ENST00000439088 ASXL2Q76L83 1435 aa21.67■■□□□ 1.06
LINC00163-202ENST00000439088 PPP1R15AO75807 674 aaPredicted RBP21.67■■□□□ 1.06
LINC00163-202ENST00000439088 MAST1Q9Y2H9 1570 aa21.66■■□□□ 1.06
LINC00163-202ENST00000439088 TONSLQ96HA7 1378 aa21.65■■□□□ 1.06
LINC00163-202ENST00000439088 KIF15Q9NS87 1388 aa21.65■■□□□ 1.06
LINC00163-202ENST00000439088 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
LINC00163-202ENST00000439088 ABCA9Q8IUA7 1624 aa21.63■■□□□ 1.05
LINC00163-202ENST00000439088 ARHGEF12Q9NZN5 1544 aa21.63■■□□□ 1.05
LINC00163-202ENST00000439088 PZPP20742 1482 aa21.63■■□□□ 1.05
LINC00163-202ENST00000439088 ABCC1P33527 1531 aa21.61■■□□□ 1.05
LINC00163-202ENST00000439088 ANKRD30BQ9BXX2 1392 aa21.6■■□□□ 1.05
LINC00163-202ENST00000439088 FOXD1Q16676 465 aa21.58■■□□□ 1.05
LINC00163-202ENST00000439088 PLXNC1O60486 1568 aa21.56■■□□□ 1.04
LINC00163-202ENST00000439088 NUP155O75694 1391 aa21.55■■□□□ 1.04
LINC00163-202ENST00000439088 KDM5DQ9BY66 1539 aa21.55■■□□□ 1.04
LINC00163-202ENST00000439088 FANCAO15360 1455 aa21.54■■□□□ 1.04
LINC00163-202ENST00000439088 TRAPPC8Q9Y2L5 1435 aa21.54■■□□□ 1.04
LINC00163-202ENST00000439088 PKD2Q13563 968 aa21.52■■□□□ 1.03
LINC00163-202ENST00000439088 RPRD2Q5VT52 1461 aaKnown RBP21.51■■□□□ 1.03
LINC00163-202ENST00000439088 RTEL1-TNFRSF6BF6WH68 1400 aa21.51■■□□□ 1.03
LINC00163-202ENST00000439088 DUOX2Q9NRD8 1548 aa21.5■■□□□ 1.03
LINC00163-202ENST00000439088 SPAG9O60271 1321 aaKnown RBP21.48■■□□□ 1.03
LINC00163-202ENST00000439088 AFAP1Q8N556 730 aa21.47■■□□□ 1.03
LINC00163-202ENST00000439088 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
LINC00163-202ENST00000439088 ERBINQ96RT1 1412 aa21.46■■□□□ 1.03
LINC00163-202ENST00000439088 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
LINC00163-202ENST00000439088 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
LINC00163-202ENST00000439088 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
LINC00163-202ENST00000439088 ADGRL1O94910 1474 aa21.45■■□□□ 1.02
LINC00163-202ENST00000439088 L3MBTL2Q969R5 705 aa21.45■■□□□ 1.02
LINC00163-202ENST00000439088 CD109Q6YHK3 1445 aa21.45■■□□□ 1.02
LINC00163-202ENST00000439088 SCAPERQ9BY12 1400 aa21.45■■□□□ 1.02
LINC00163-202ENST00000439088 UNC13BO14795 1591 aa21.44■■□□□ 1.02
LINC00163-202ENST00000439088 FAM135AQ9P2D6 1515 aa21.42■■□□□ 1.02
LINC00163-202ENST00000439088 ZFYVE16Q7Z3T8 1539 aa21.42■■□□□ 1.02
LINC00163-202ENST00000439088 CFAP74Q9C0B2 1584 aa21.39■■□□□ 1.01
LINC00163-202ENST00000439088 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.01
LINC00163-202ENST00000439088 INO80Q9ULG1 1556 aaPredicted RBP21.38■■□□□ 1.01
LINC00163-202ENST00000439088 ATP7AQ04656 1500 aa21.37■■□□□ 1.01
LINC00163-202ENST00000439088 MAGI2Q86UL8 1455 aa21.37■■□□□ 1.01
LINC00163-202ENST00000439088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.36■■□□□ 1.01
LINC00163-202ENST00000439088 IQGAP3Q86VI3 1631 aa21.36■■□□□ 1.01
LINC00163-202ENST00000439088 ZNF518AQ6AHZ1 1483 aa21.33■■□□□ 1.01
LINC00163-202ENST00000439088 MIER1Q8N108 512 aa21.32■■□□□ 1
LINC00163-202ENST00000439088 NEO1Q92859 1461 aa21.31■■□□□ 1
LINC00163-202ENST00000439088 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
LINC00163-202ENST00000439088 GLI2P10070 1586 aa21.29■■□□□ 1
LINC00163-202ENST00000439088 DHX29Q7Z478 1369 aaKnown RBP21.29■■□□□ 1
LINC00163-202ENST00000439088 POGZQ7Z3K3 1410 aa21.29■■□□□ 1
LINC00163-202ENST00000439088 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
LINC00163-202ENST00000439088 MAP3K4Q9Y6R4 1608 aa21.27■■□□□ 1
LINC00163-202ENST00000439088 KIDINS220Q9ULH0 1771 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms