RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 ABCC10Q5T3U5 1492 aa25.33■■□□□ 1.65
TVP23C-204ENST00000438826 DIEXFQ68CQ4 756 aaKnown RBP25.32■■□□□ 1.64
TVP23C-204ENST00000438826 ABCC2Q92887 1545 aa25.31■■□□□ 1.64
TVP23C-204ENST00000438826 SIN3AQ96ST3 1273 aa25.26■■□□□ 1.63
TVP23C-204ENST00000438826 ZNF777Q9ULD5 760 aaPredicted RBP25.26■■□□□ 1.63
TVP23C-204ENST00000438826 CDC42BPAQ5VT25 1732 aa25.26■■□□□ 1.63
TVP23C-204ENST00000438826 TIMELESSQ9UNS1 1208 aa25.26■■□□□ 1.63
TVP23C-204ENST00000438826 ACIN1Q9UKV3 1341 aaKnown RBP25.24■■□□□ 1.63
TVP23C-204ENST00000438826 NEUROD1Q13562 356 aa25.23■■□□□ 1.63
TVP23C-204ENST00000438826 UHRF1BP1LA0JNW5 1464 aa25.22■■□□□ 1.63
TVP23C-204ENST00000438826 KDM6BO15054 1643 aa25.2■■□□□ 1.63
TVP23C-204ENST00000438826 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
TVP23C-204ENST00000438826 NCOA1Q15788 1441 aa25.15■■□□□ 1.62
TVP23C-204ENST00000438826 CROCC2H7BZ55 1655 aa25.15■■□□□ 1.62
TVP23C-204ENST00000438826 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
TVP23C-204ENST00000438826 ADGBQ8N7X0 1667 aa25.14■■□□□ 1.61
TVP23C-204ENST00000438826 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
TVP23C-204ENST00000438826 PREX2Q70Z35 1606 aa25.11■■□□□ 1.61
TVP23C-204ENST00000438826 ZCCHC11Q5TAX3 1644 aaKnown RBP25.11■■□□□ 1.61
TVP23C-204ENST00000438826 ANKRD30AQ9BXX3 1397 aa25.11■■□□□ 1.61
TVP23C-204ENST00000438826 SHANK2Q9UPX8 1470 aa25.1■■□□□ 1.61
TVP23C-204ENST00000438826 MPHOSPH9Q99550 1183 aa25.1■■□□□ 1.61
TVP23C-204ENST00000438826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.09■■□□□ 1.61
TVP23C-204ENST00000438826 OSCARQ8IYS5 282 aa25.09■■□□□ 1.61
TVP23C-204ENST00000438826 DENND4BO75064 1496 aaPredicted RBP25.08■■□□□ 1.61
TVP23C-204ENST00000438826 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.61
TVP23C-204ENST00000438826 TTC37Q6PGP7 1564 aa25.07■■□□□ 1.6
TVP23C-204ENST00000438826 TONSLQ96HA7 1378 aa25.06■■□□□ 1.6
TVP23C-204ENST00000438826 ARHGEF5Q12774 1597 aa25.06■■□□□ 1.6
TVP23C-204ENST00000438826 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
TVP23C-204ENST00000438826 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
TVP23C-204ENST00000438826 C9orf84Q5VXU9 1444 aa25.05■■□□□ 1.6
TVP23C-204ENST00000438826 PPP1R15AO75807 674 aaPredicted RBP25.05■■□□□ 1.6
TVP23C-204ENST00000438826 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
TVP23C-204ENST00000438826 MBD5Q9P267 1494 aa25.05■■□□□ 1.6
TVP23C-204ENST00000438826 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.62e-6■■■■□ 22
TVP23C-204ENST00000438826 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
TVP23C-204ENST00000438826 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
TVP23C-204ENST00000438826 ARHGAP5Q13017 1502 aa25.02■■□□□ 1.6
TVP23C-204ENST00000438826 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
TVP23C-204ENST00000438826 CCDC141Q6ZP82 1450 aa24.99■■□□□ 1.59
TVP23C-204ENST00000438826 ANKRD50Q9ULJ7 1429 aa24.99■■□□□ 1.59
TVP23C-204ENST00000438826 SLC4A1APQ9BWU0 796 aaKnown RBP24.97■■□□□ 1.59
TVP23C-204ENST00000438826 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
TVP23C-204ENST00000438826 PLCH2O75038 1416 aa24.95■■□□□ 1.58
TVP23C-204ENST00000438826 KIAA1107Q9UPP5 1409 aa24.95■■□□□ 1.58
TVP23C-204ENST00000438826 SYCP2Q9BX26 1530 aa24.94■■□□□ 1.58
TVP23C-204ENST00000438826 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
TVP23C-204ENST00000438826 PZPP20742 1482 aa24.92■■□□□ 1.58
TVP23C-204ENST00000438826 FOXD1Q16676 465 aa24.92■■□□□ 1.58
TVP23C-204ENST00000438826 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
TVP23C-204ENST00000438826 WDR7Q9Y4E6 1490 aa24.9■■□□□ 1.58
TVP23C-204ENST00000438826 EFCAB2Q5VUJ9 269 aa24.89■■□□□ 1.58
TVP23C-204ENST00000438826 MAST1Q9Y2H9 1570 aa24.87■■□□□ 1.57
TVP23C-204ENST00000438826 MIER1Q8N108 512 aa24.84■■□□□ 1.57
TVP23C-204ENST00000438826 ARAP3Q8WWN8 1544 aa24.84■■□□□ 1.57
TVP23C-204ENST00000438826 RPRD2Q5VT52 1461 aaKnown RBP24.83■■□□□ 1.57
TVP23C-204ENST00000438826 NUP155O75694 1391 aa24.82■■□□□ 1.56
TVP23C-204ENST00000438826 ARHGEF12Q9NZN5 1544 aa24.82■■□□□ 1.56
TVP23C-204ENST00000438826 KDM5DQ9BY66 1539 aa24.8■■□□□ 1.56
TVP23C-204ENST00000438826 ABCC1P33527 1531 aa24.79■■□□□ 1.56
TVP23C-204ENST00000438826 ASXL2Q76L83 1435 aa24.79■■□□□ 1.56
TVP23C-204ENST00000438826 PKD2Q13563 968 aa24.79■■□□□ 1.56
TVP23C-204ENST00000438826 NPM1P06748 294 aaKnown RBP eCLIP24.78■■□□□ 1.56
TVP23C-204ENST00000438826 L3MBTL2Q969R5 705 aa24.77■■□□□ 1.56
TVP23C-204ENST00000438826 PLXNC1O60486 1568 aa24.77■■□□□ 1.56
TVP23C-204ENST00000438826 ABCA9Q8IUA7 1624 aa24.76■■□□□ 1.55
TVP23C-204ENST00000438826 TRAPPC8Q9Y2L5 1435 aa24.72■■□□□ 1.55
TVP23C-204ENST00000438826 TEX14Q8IWB6 1497 aa24.71■■□□□ 1.55
TVP23C-204ENST00000438826 DUOX2Q9NRD8 1548 aa24.7■■□□□ 1.54
TVP23C-204ENST00000438826 FANCAO15360 1455 aa24.69■■□□□ 1.54
TVP23C-204ENST00000438826 FAM135AQ9P2D6 1515 aa24.67■■□□□ 1.54
TVP23C-204ENST00000438826 ERBINQ96RT1 1412 aa24.67■■□□□ 1.54
TVP23C-204ENST00000438826 RTEL1-TNFRSF6BF6WH68 1400 aa24.66■■□□□ 1.54
TVP23C-204ENST00000438826 HIRIP3Q9BW71 556 aaPredicted RBP24.66■■□□□ 1.54
TVP23C-204ENST00000438826 UNC13BO14795 1591 aa24.66■■□□□ 1.54
TVP23C-204ENST00000438826 SPAG9O60271 1321 aaKnown RBP24.66■■□□□ 1.54
TVP23C-204ENST00000438826 AFAP1Q8N556 730 aa24.64■■□□□ 1.53
TVP23C-204ENST00000438826 ADGRL1O94910 1474 aa24.6■■□□□ 1.53
TVP23C-204ENST00000438826 DDX10Q13206 875 aaKnown RBP24.59■■□□□ 1.53
TVP23C-204ENST00000438826 ZFYVE16Q7Z3T8 1539 aa24.59■■□□□ 1.53
TVP23C-204ENST00000438826 SCAPERQ9BY12 1400 aa24.58■■□□□ 1.53
TVP23C-204ENST00000438826 NBPF8Q3BBV2 869 aa24.58■■□□□ 1.52
TVP23C-204ENST00000438826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.58■■□□□ 1.521e-7■□□□□ 8.3
TVP23C-204ENST00000438826 MAGI2Q86UL8 1455 aa24.57■■□□□ 1.52
TVP23C-204ENST00000438826 CENPBP07199 599 aaPredicted RBP24.57■■□□□ 1.52
TVP23C-204ENST00000438826 IQGAP3Q86VI3 1631 aa24.56■■□□□ 1.52
TVP23C-204ENST00000438826 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
TVP23C-204ENST00000438826 HSPA5P11021 654 aaKnown RBP24.54■■□□□ 1.52
TVP23C-204ENST00000438826 CD109Q6YHK3 1445 aa24.53■■□□□ 1.52
TVP23C-204ENST00000438826 ATP7AQ04656 1500 aa24.53■■□□□ 1.52
TVP23C-204ENST00000438826 INO80Q9ULG1 1556 aaPredicted RBP24.52■■□□□ 1.52
TVP23C-204ENST00000438826 YTHDC1Q96MU7 727 aaKnown RBP24.49■■□□□ 1.51
TVP23C-204ENST00000438826 CFAP74Q9C0B2 1584 aa24.49■■□□□ 1.51
TVP23C-204ENST00000438826 CCDC144AA2RUR9 1427 aa24.47■■□□□ 1.51
TVP23C-204ENST00000438826 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
TVP23C-204ENST00000438826 ZNF518AQ6AHZ1 1483 aa24.46■■□□□ 1.51
TVP23C-204ENST00000438826 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.51
TVP23C-204ENST00000438826 UHRF1BP1Q6BDS2 1440 aa24.45■■□□□ 1.5
TVP23C-204ENST00000438826 PLA2R1Q13018 1463 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms