RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 SNPHO15079 494 aa13.49□□□□□ -0.25
LINC00271-203ENST00000438618 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
LINC00271-203ENST00000438618 MROH2BQ7Z745 1585 aa13.46□□□□□ -0.25
LINC00271-203ENST00000438618 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
LINC00271-203ENST00000438618 RGL2O15211 777 aa13.46□□□□□ -0.25
LINC00271-203ENST00000438618 ERCC6Q03468 1493 aa13.44□□□□□ -0.26
LINC00271-203ENST00000438618 LCE2DQ5TA82 110 aaPredicted RBP13.44□□□□□ -0.26
LINC00271-203ENST00000438618 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
LINC00271-203ENST00000438618 ST18O60284 1047 aa13.41□□□□□ -0.26
LINC00271-203ENST00000438618 PEG3Q9GZU2 1588 aa13.41□□□□□ -0.26
LINC00271-203ENST00000438618 NLRP6P59044 892 aa13.4□□□□□ -0.26
LINC00271-203ENST00000438618 NESP48681 1621 aa13.39□□□□□ -0.27
LINC00271-203ENST00000438618 CUX2O14529 1486 aa13.39□□□□□ -0.27
LINC00271-203ENST00000438618 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
LINC00271-203ENST00000438618 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
LINC00271-203ENST00000438618 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
LINC00271-203ENST00000438618 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
LINC00271-203ENST00000438618 TMEM121BQ9BXQ6 578 aaPredicted RBP13.32□□□□□ -0.28
LINC00271-203ENST00000438618 WIZO95785 1651 aa13.29□□□□□ -0.28
LINC00271-203ENST00000438618 MFRPQ9BY79 579 aa13.28□□□□□ -0.28
LINC00271-203ENST00000438618 FBXO22Q8NEZ5 403 aa13.27□□□□□ -0.29
LINC00271-203ENST00000438618 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
LINC00271-203ENST00000438618 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
LINC00271-203ENST00000438618 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
LINC00271-203ENST00000438618 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
LINC00271-203ENST00000438618 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
LINC00271-203ENST00000438618 RSF1Q96T23 1441 aaPredicted RBP13.26□□□□□ -0.29
LINC00271-203ENST00000438618 EMP3P54852 163 aa13.23□□□□□ -0.29
LINC00271-203ENST00000438618 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
LINC00271-203ENST00000438618 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
LINC00271-203ENST00000438618 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
LINC00271-203ENST00000438618 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
LINC00271-203ENST00000438618 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
LINC00271-203ENST00000438618 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
LINC00271-203ENST00000438618 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
LINC00271-203ENST00000438618 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
LINC00271-203ENST00000438618 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
LINC00271-203ENST00000438618 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
LINC00271-203ENST00000438618 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
LINC00271-203ENST00000438618 CFTRP13569 1480 aa13.09□□□□□ -0.31
LINC00271-203ENST00000438618 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
LINC00271-203ENST00000438618 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
LINC00271-203ENST00000438618 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
LINC00271-203ENST00000438618 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
LINC00271-203ENST00000438618 PPP1R37O75864 691 aa13.07□□□□□ -0.32
LINC00271-203ENST00000438618 HS3ST6Q96QI5 342 aa13.07□□□□□ -0.32
LINC00271-203ENST00000438618 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
LINC00271-203ENST00000438618 ERBB3P21860 1342 aa13.05□□□□□ -0.32
LINC00271-203ENST00000438618 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
LINC00271-203ENST00000438618 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
LINC00271-203ENST00000438618 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
LINC00271-203ENST00000438618 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
LINC00271-203ENST00000438618 WDR62O43379 1518 aa13.01□□□□□ -0.33
LINC00271-203ENST00000438618 ARSIQ5FYB1 569 aa12.98□□□□□ -0.33
LINC00271-203ENST00000438618 KIF3CO14782 793 aa12.97□□□□□ -0.33
LINC00271-203ENST00000438618 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
LINC00271-203ENST00000438618 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
LINC00271-203ENST00000438618 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
LINC00271-203ENST00000438618 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
LINC00271-203ENST00000438618 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
LINC00271-203ENST00000438618 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
LINC00271-203ENST00000438618 SUPT5HO00267 1087 aaKnown RBP12.9□□□□□ -0.34
LINC00271-203ENST00000438618 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00271-203ENST00000438618 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
LINC00271-203ENST00000438618 NUDT7P0C024 238 aa12.85□□□□□ -0.35
LINC00271-203ENST00000438618 KRTAP3-3Q9BYR6 98 aa12.85□□□□□ -0.35
LINC00271-203ENST00000438618 KRTAP3-2Q9BYR7 98 aa12.85□□□□□ -0.35
LINC00271-203ENST00000438618 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
LINC00271-203ENST00000438618 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
LINC00271-203ENST00000438618 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
LINC00271-203ENST00000438618 SLC34A2O95436 690 aa12.84□□□□□ -0.35
LINC00271-203ENST00000438618 PLPP6Q8IY26 295 aa12.84□□□□□ -0.35
LINC00271-203ENST00000438618 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
LINC00271-203ENST00000438618 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
LINC00271-203ENST00000438618 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
LINC00271-203ENST00000438618 FOXK1P85037 733 aa12.82□□□□□ -0.36
LINC00271-203ENST00000438618 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
LINC00271-203ENST00000438618 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
LINC00271-203ENST00000438618 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
LINC00271-203ENST00000438618 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
LINC00271-203ENST00000438618 DSG2Q14126 1118 aa12.8□□□□□ -0.36
LINC00271-203ENST00000438618 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
LINC00271-203ENST00000438618 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
LINC00271-203ENST00000438618 TBC1D12O60347 775 aa12.78□□□□□ -0.36
LINC00271-203ENST00000438618 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
LINC00271-203ENST00000438618 PDE4AP27815 886 aa12.75□□□□□ -0.37
LINC00271-203ENST00000438618 DNMBPQ6XZF7 1577 aa12.75□□□□□ -0.37
LINC00271-203ENST00000438618 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00271-203ENST00000438618 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
LINC00271-203ENST00000438618 SOGA1O94964 1423 aa12.72□□□□□ -0.37
LINC00271-203ENST00000438618 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
LINC00271-203ENST00000438618 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
LINC00271-203ENST00000438618 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
LINC00271-203ENST00000438618 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00271-203ENST00000438618 POLA1P09884 1462 aaPredicted RBP12.7□□□□□ -0.38
LINC00271-203ENST00000438618 RAD54L2Q9Y4B4 1467 aa12.7□□□□□ -0.38
LINC00271-203ENST00000438618 TDRD9Q8NDG6 1382 aaKnown RBP12.69□□□□□ -0.38
LINC00271-203ENST00000438618 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
LINC00271-203ENST00000438618 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
LINC00271-203ENST00000438618 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms