RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 TTC37Q6PGP7 1564 aa28.96■■■□□ 2.23
CHRNA7-202ENST00000437966 DAPK1P53355 1430 aa28.96■■■□□ 2.23
CHRNA7-202ENST00000437966 HFM1A2PYH4 1435 aa28.93■■■□□ 2.22
CHRNA7-202ENST00000437966 NAIPQ13075 1403 aa28.92■■■□□ 2.22
CHRNA7-202ENST00000437966 DNMT1P26358 1616 aaKnown RBP28.91■■■□□ 2.22
CHRNA7-202ENST00000437966 NPM1P06748 294 aaKnown RBP eCLIP28.9■■■□□ 2.22
CHRNA7-202ENST00000437966 CYB5RLQ6IPT4 315 aa28.89■■■□□ 2.22
CHRNA7-202ENST00000437966 CDC42BPBQ9Y5S2 1711 aa28.89■■■□□ 2.21
CHRNA7-202ENST00000437966 HNRNPMP52272 730 aaKnown RBP eCLIP28.88■■■□□ 2.21
CHRNA7-202ENST00000437966 WDR7Q9Y4E6 1490 aa28.87■■■□□ 2.21
CHRNA7-202ENST00000437966 PREX2Q70Z35 1606 aa28.87■■■□□ 2.21
CHRNA7-202ENST00000437966 ASXL2Q76L83 1435 aa28.86■■■□□ 2.21
CHRNA7-202ENST00000437966 RIMBP3CA6NJZ7 1639 aa28.84■■■□□ 2.21
CHRNA7-202ENST00000437966 RIMBP3BA6NNM3 1639 aa28.84■■■□□ 2.21
CHRNA7-202ENST00000437966 RIMBP3Q9UFD9 1639 aa28.84■■■□□ 2.21
CHRNA7-202ENST00000437966 ARHGAP5Q13017 1502 aa28.84■■■□□ 2.21
CHRNA7-202ENST00000437966 SAMD9LQ8IVG5 1584 aa28.81■■■□□ 2.2
CHRNA7-202ENST00000437966 AKNAQ7Z591 1439 aa28.81■■■□□ 2.2
CHRNA7-202ENST00000437966 MYO5CQ9NQX4 1742 aa28.8■■■□□ 2.2
CHRNA7-202ENST00000437966 PLCH2O75038 1416 aa28.78■■■□□ 2.2
CHRNA7-202ENST00000437966 KDM6BO15054 1643 aa28.78■■■□□ 2.2
CHRNA7-202ENST00000437966 ROCK1Q13464 1354 aa28.77■■■□□ 2.2
CHRNA7-202ENST00000437966 GCC2Q8IWJ2 1684 aa28.75■■■□□ 2.19
CHRNA7-202ENST00000437966 MBD5Q9P267 1494 aa28.75■■■□□ 2.19
CHRNA7-202ENST00000437966 EFCAB2Q5VUJ9 269 aa28.73■■■□□ 2.19
CHRNA7-202ENST00000437966 CLSPNQ9HAW4 1339 aa28.73■■■□□ 2.19
CHRNA7-202ENST00000437966 CROCC2H7BZ55 1655 aa28.72■■■□□ 2.19
CHRNA7-202ENST00000437966 TSPY4P0CV99 314 aa28.72■■■□□ 2.19
CHRNA7-202ENST00000437966 TSPY10P0CW01 314 aa28.72■■■□□ 2.19
CHRNA7-202ENST00000437966 MAPKBP1O60336 1514 aa28.71■■■□□ 2.19
CHRNA7-202ENST00000437966 NCOA1Q15788 1441 aa28.7■■■□□ 2.19
CHRNA7-202ENST00000437966 SYCP2Q9BX26 1530 aa28.7■■■□□ 2.19
CHRNA7-202ENST00000437966 TRIM52Q96A61 297 aa28.7■■■□□ 2.18
CHRNA7-202ENST00000437966 C9orf84Q5VXU9 1444 aa28.69■■■□□ 2.18
CHRNA7-202ENST00000437966 ARHGEF5Q12774 1597 aa28.68■■■□□ 2.18
CHRNA7-202ENST00000437966 ARHGEF12Q9NZN5 1544 aa28.66■■■□□ 2.18
CHRNA7-202ENST00000437966 ADGBQ8N7X0 1667 aa28.66■■■□□ 2.18
CHRNA7-202ENST00000437966 ANKRD30AQ9BXX3 1397 aa28.66■■■□□ 2.18
CHRNA7-202ENST00000437966 ADGRL2O95490 1459 aa28.66■■■□□ 2.18
CHRNA7-202ENST00000437966 ABCA9Q8IUA7 1624 aa28.65■■■□□ 2.18
CHRNA7-202ENST00000437966 CCDC141Q6ZP82 1450 aa28.65■■■□□ 2.18
CHRNA7-202ENST00000437966 SHANK2Q9UPX8 1470 aa28.63■■■□□ 2.17
CHRNA7-202ENST00000437966 RSPH4AQ5TD94 716 aa28.62■■■□□ 2.17
CHRNA7-202ENST00000437966 KIAA1107Q9UPP5 1409 aa28.62■■■□□ 2.17
CHRNA7-202ENST00000437966 PLEKHH2Q8IVE3 1493 aa28.61■■■□□ 2.17
CHRNA7-202ENST00000437966 SIN3AQ96ST3 1273 aa28.61■■■□□ 2.17
CHRNA7-202ENST00000437966 NEUROD1Q13562 356 aa28.57■■■□□ 2.16
CHRNA7-202ENST00000437966 ABCC1P33527 1531 aa28.56■■■□□ 2.16
CHRNA7-202ENST00000437966 ARAP3Q8WWN8 1544 aa28.56■■■□□ 2.16
CHRNA7-202ENST00000437966 FANCAO15360 1455 aa28.56■■■□□ 2.16
CHRNA7-202ENST00000437966 TRAPPC8Q9Y2L5 1435 aa28.56■■■□□ 2.16
CHRNA7-202ENST00000437966 KIF15Q9NS87 1388 aa28.54■■■□□ 2.16
CHRNA7-202ENST00000437966 CD109Q6YHK3 1445 aa28.53■■■□□ 2.16
CHRNA7-202ENST00000437966 AFAP1Q8N556 730 aa28.52■■■□□ 2.16
CHRNA7-202ENST00000437966 MPHOSPH9Q99550 1183 aa28.52■■■□□ 2.16
CHRNA7-202ENST00000437966 ANKRD50Q9ULJ7 1429 aa28.52■■■□□ 2.16
CHRNA7-202ENST00000437966 DENND4BO75064 1496 aaPredicted RBP28.49■■■□□ 2.15
CHRNA7-202ENST00000437966 FOXD1Q16676 465 aa28.48■■■□□ 2.15
CHRNA7-202ENST00000437966 MAST1Q9Y2H9 1570 aa28.47■■■□□ 2.15
CHRNA7-202ENST00000437966 SCAPERQ9BY12 1400 aa28.46■■■□□ 2.15
CHRNA7-202ENST00000437966 ADGRL1O94910 1474 aa28.45■■■□□ 2.14
CHRNA7-202ENST00000437966 SLC4A1APQ9BWU0 796 aaKnown RBP28.43■■■□□ 2.14
CHRNA7-202ENST00000437966 SPAG9O60271 1321 aaKnown RBP28.43■■■□□ 2.14
CHRNA7-202ENST00000437966 ACIN1Q9UKV3 1341 aaKnown RBP28.39■■■□□ 2.14
CHRNA7-202ENST00000437966 PZPP20742 1482 aa28.39■■■□□ 2.14
CHRNA7-202ENST00000437966 FAM69CQ0P6D2 419 aa28.38■■■□□ 2.13
CHRNA7-202ENST00000437966 MYT1LQ9UL68 1186 aa28.37■■■□□ 2.13
CHRNA7-202ENST00000437966 NUP155O75694 1391 aa28.36■■■□□ 2.13
CHRNA7-202ENST00000437966 PLXNC1O60486 1568 aa28.35■■■□□ 2.13
CHRNA7-202ENST00000437966 ZFYVE16Q7Z3T8 1539 aa28.3■■■□□ 2.12
CHRNA7-202ENST00000437966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.12
CHRNA7-202ENST00000437966 RTEL1-TNFRSF6BF6WH68 1400 aa28.3■■■□□ 2.12
CHRNA7-202ENST00000437966 PKD2Q13563 968 aa28.29■■■□□ 2.12
CHRNA7-202ENST00000437966 MAP3K4Q9Y6R4 1608 aa28.29■■■□□ 2.12
CHRNA7-202ENST00000437966 DUOX2Q9NRD8 1548 aa28.29■■■□□ 2.12
CHRNA7-202ENST00000437966 GLI2P10070 1586 aa28.29■■■□□ 2.12
CHRNA7-202ENST00000437966 CFAP74Q9C0B2 1584 aa28.28■■■□□ 2.12
CHRNA7-202ENST00000437966 DIP2BQ9P265 1576 aa28.27■■■□□ 2.12
CHRNA7-202ENST00000437966 ANKRD30BQ9BXX2 1392 aa28.26■■■□□ 2.11
CHRNA7-202ENST00000437966 ATP7AQ04656 1500 aa28.26■■■□□ 2.11
CHRNA7-202ENST00000437966 RAPGEF3O95398 923 aa28.24■■■□□ 2.11
CHRNA7-202ENST00000437966 INO80Q9ULG1 1556 aaPredicted RBP28.24■■■□□ 2.11
CHRNA7-202ENST00000437966 TONSLQ96HA7 1378 aa28.23■■■□□ 2.11
CHRNA7-202ENST00000437966 NEO1Q92859 1461 aa28.23■■■□□ 2.11
CHRNA7-202ENST00000437966 TIMELESSQ9UNS1 1208 aa28.22■■■□□ 2.11
CHRNA7-202ENST00000437966 POGZQ7Z3K3 1410 aa28.22■■■□□ 2.11
CHRNA7-202ENST00000437966 ZNF518AQ6AHZ1 1483 aa28.22■■■□□ 2.11
CHRNA7-202ENST00000437966 ERBINQ96RT1 1412 aa28.21■■■□□ 2.11
CHRNA7-202ENST00000437966 KDM5DQ9BY66 1539 aa28.21■■■□□ 2.11
CHRNA7-202ENST00000437966 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
CHRNA7-202ENST00000437966 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
CHRNA7-202ENST00000437966 TSPOAP1O95153 1857 aa28.17■■■□□ 2.1
CHRNA7-202ENST00000437966 KIDINS220Q9ULH0 1771 aa28.16■■■□□ 2.1
CHRNA7-202ENST00000437966 UNC13BO14795 1591 aa28.16■■■□□ 2.1
CHRNA7-202ENST00000437966 FAM135AQ9P2D6 1515 aa28.16■■■□□ 2.1
CHRNA7-202ENST00000437966 KDM5CP41229 1560 aa28.13■■■□□ 2.09
CHRNA7-202ENST00000437966 DHX29Q7Z478 1369 aaKnown RBP28.12■■■□□ 2.09
CHRNA7-202ENST00000437966 KIF3BO15066 747 aa28.11■■■□□ 2.09
CHRNA7-202ENST00000437966 PPRC1Q5VV67 1664 aaKnown RBP28.09■■■□□ 2.09
CHRNA7-202ENST00000437966 MLH3Q9UHC1 1453 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms