RNA–Protein interactions for RNA: ENST00000437728.1

RPS3AP29-201, Transcript of ribosomal protein S3a pseudogene 29, humanhuman

BASIC

Gene RPS3AP29, Length 769 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP29-201ENST00000437728 MICALL2Q8IY33 904 aa15.78■□□□□ 0.12
RPS3AP29-201ENST00000437728 TMEM121BQ9BXQ6 578 aaPredicted RBP15.77■□□□□ 0.12
RPS3AP29-201ENST00000437728 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
RPS3AP29-201ENST00000437728 PPP1R37O75864 691 aa15.72■□□□□ 0.11
RPS3AP29-201ENST00000437728 RYDENQ9NUL5 291 aaKnown RBP15.68■□□□□ 0.1
RPS3AP29-201ENST00000437728 GTPBP6O43824 516 aaPredicted RBP15.62■□□□□ 0.09
RPS3AP29-201ENST00000437728 BBXQ8WY36 941 aaPredicted RBP15.62■□□□□ 0.09
RPS3AP29-201ENST00000437728 TMEM92Q6UXU6 159 aa15.61■□□□□ 0.09
RPS3AP29-201ENST00000437728 FAM163AQ96GL9 167 aaPredicted RBP15.61■□□□□ 0.09
RPS3AP29-201ENST00000437728 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
RPS3AP29-201ENST00000437728 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
RPS3AP29-201ENST00000437728 SNPHO15079 494 aa15.56■□□□□ 0.08
RPS3AP29-201ENST00000437728 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
RPS3AP29-201ENST00000437728 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
RPS3AP29-201ENST00000437728 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.52■□□□□ 0.08
RPS3AP29-201ENST00000437728 C2orf72A6NCS6 295 aa15.47■□□□□ 0.07
RPS3AP29-201ENST00000437728 LCE2DQ5TA82 110 aaPredicted RBP15.47■□□□□ 0.07
RPS3AP29-201ENST00000437728 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
RPS3AP29-201ENST00000437728 TMC2Q8TDI7 906 aa15.47■□□□□ 0.07
RPS3AP29-201ENST00000437728 ST18O60284 1047 aa15.45■□□□□ 0.06
RPS3AP29-201ENST00000437728 KIF3CO14782 793 aa15.44■□□□□ 0.06
RPS3AP29-201ENST00000437728 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
RPS3AP29-201ENST00000437728 PEG3Q9GZU2 1588 aa15.44■□□□□ 0.06
RPS3AP29-201ENST00000437728 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
RPS3AP29-201ENST00000437728 ATAD2BQ9ULI0 1458 aa15.42■□□□□ 0.06
RPS3AP29-201ENST00000437728 HOXB3P14651 431 aaPredicted RBP15.41■□□□□ 0.06
RPS3AP29-201ENST00000437728 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
RPS3AP29-201ENST00000437728 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
RPS3AP29-201ENST00000437728 DOK7Q18PE1 504 aa15.4■□□□□ 0.06
RPS3AP29-201ENST00000437728 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
RPS3AP29-201ENST00000437728 ZNF710Q8N1W2 664 aa15.38■□□□□ 0.05
RPS3AP29-201ENST00000437728 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
RPS3AP29-201ENST00000437728 POTEMA6NI47 508 aa15.36■□□□□ 0.05
RPS3AP29-201ENST00000437728 GPHNQ9NQX3 736 aaPredicted RBP15.36■□□□□ 0.05
RPS3AP29-201ENST00000437728 POTEGQ6S5H5 508 aa15.35■□□□□ 0.05
RPS3AP29-201ENST00000437728 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
RPS3AP29-201ENST00000437728 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
RPS3AP29-201ENST00000437728 CRISPLD2Q9H0B8 497 aa15.31■□□□□ 0.04
RPS3AP29-201ENST00000437728 PDE4AP27815 886 aa15.3■□□□□ 0.04
RPS3AP29-201ENST00000437728 FOXK1P85037 733 aa15.3■□□□□ 0.04
RPS3AP29-201ENST00000437728 MARVELD3Q96A59 401 aa15.3■□□□□ 0.04
RPS3AP29-201ENST00000437728 WIZO95785 1651 aa15.29■□□□□ 0.04
RPS3AP29-201ENST00000437728 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
RPS3AP29-201ENST00000437728 NCKAP5LQ9HCH0 1330 aa15.29■□□□□ 0.04
RPS3AP29-201ENST00000437728 DSG2Q14126 1118 aa15.29■□□□□ 0.04
RPS3AP29-201ENST00000437728 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
RPS3AP29-201ENST00000437728 PLPP6Q8IY26 295 aa15.28■□□□□ 0.04
RPS3AP29-201ENST00000437728 HOXB1P14653 301 aaPredicted RBP15.25■□□□□ 0.03
RPS3AP29-201ENST00000437728 LARP6Q9BRS8 491 aaKnown RBP15.25■□□□□ 0.03
RPS3AP29-201ENST00000437728 ZSWIM6Q9HCJ5 1215 aa15.25■□□□□ 0.03
RPS3AP29-201ENST00000437728 EMP3P54852 163 aa15.24■□□□□ 0.03
RPS3AP29-201ENST00000437728 GPR153Q6NV75 609 aa15.22■□□□□ 0.03
RPS3AP29-201ENST00000437728 ARSIQ5FYB1 569 aa15.21■□□□□ 0.03
RPS3AP29-201ENST00000437728 PPP1R15BQ5SWA1 713 aa15.21■□□□□ 0.03
RPS3AP29-201ENST00000437728 SLC34A2O95436 690 aa15.2■□□□□ 0.02
RPS3AP29-201ENST00000437728 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
RPS3AP29-201ENST00000437728 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
RPS3AP29-201ENST00000437728 KHSRPQ92945 711 aaKnown RBP eCLIP15.17■□□□□ 0.02
RPS3AP29-201ENST00000437728 PCDHGA4Q9Y5G9 962 aa15.16■□□□□ 0.02
RPS3AP29-201ENST00000437728 FAM205CA6NFA0 338 aa15.15■□□□□ 0.02
RPS3AP29-201ENST00000437728 MFSD10Q14728 455 aa15.14■□□□□ 0.01
RPS3AP29-201ENST00000437728 PTCD2Q8WV60 388 aaKnown RBP15.12■□□□□ 0.01
RPS3AP29-201ENST00000437728 ERBB3P21860 1342 aa15.11■□□□□ 0.01
RPS3AP29-201ENST00000437728 NUDT7P0C024 238 aa15.1■□□□□ 0.01
RPS3AP29-201ENST00000437728 HS3ST6Q96QI5 342 aa15.1■□□□□ 0.01
RPS3AP29-201ENST00000437728 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.01
RPS3AP29-201ENST00000437728 POTEB3A0JP26 581 aa15.07■□□□□ 0
RPS3AP29-201ENST00000437728 TBC1D12O60347 775 aa15.07■□□□□ 0
RPS3AP29-201ENST00000437728 POTEBQ6S5H4 581 aa15.07■□□□□ 0
RPS3AP29-201ENST00000437728 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
RPS3AP29-201ENST00000437728 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
RPS3AP29-201ENST00000437728 OXER1Q8TDS5 423 aa15.05■□□□□ -0
RPS3AP29-201ENST00000437728 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
RPS3AP29-201ENST00000437728 PLCB2Q00722 1185 aa15.04■□□□□ -0
RPS3AP29-201ENST00000437728 VARS2Q5ST30 1063 aaKnown RBP15.04■□□□□ -0
RPS3AP29-201ENST00000437728 ZNF316A6NFI3 1004 aaPredicted RBP15.03■□□□□ -0
RPS3AP29-201ENST00000437728 LHX6Q9UPM6 363 aa15□□□□□ -0.01
RPS3AP29-201ENST00000437728 EMILIN3Q9NT22 766 aa14.99□□□□□ -0.01
RPS3AP29-201ENST00000437728 WDR70Q9NW82 654 aa14.99□□□□□ -0.01
RPS3AP29-201ENST00000437728 LAMC3Q9Y6N6 1575 aa14.97□□□□□ -0.01
RPS3AP29-201ENST00000437728 KDM4FA0A1W2PPD8 638 aa14.96□□□□□ -0.01
RPS3AP29-201ENST00000437728 MAP3K9P80192 1104 aa14.96□□□□□ -0.01
RPS3AP29-201ENST00000437728 NESP48681 1621 aa14.95□□□□□ -0.02
RPS3AP29-201ENST00000437728 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
RPS3AP29-201ENST00000437728 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
RPS3AP29-201ENST00000437728 CAMK2BQ13554 666 aa14.94□□□□□ -0.02
RPS3AP29-201ENST00000437728 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
RPS3AP29-201ENST00000437728 CFTRP13569 1480 aa14.9□□□□□ -0.02
RPS3AP29-201ENST00000437728 ZNF687Q8N1G0 1237 aa14.9□□□□□ -0.02
RPS3AP29-201ENST00000437728 EVI5O60447 810 aa14.89□□□□□ -0.03
RPS3AP29-201ENST00000437728 E2F4Q16254 413 aa14.89□□□□□ -0.03
RPS3AP29-201ENST00000437728 DPYSL4O14531 572 aa14.87□□□□□ -0.03
RPS3AP29-201ENST00000437728 HAP1P54257 671 aaPredicted RBP14.87□□□□□ -0.03
RPS3AP29-201ENST00000437728 PSDA5PKW4 1024 aaPredicted RBP14.85□□□□□ -0.03
RPS3AP29-201ENST00000437728 KRTAP3-3Q9BYR6 98 aa14.85□□□□□ -0.03
RPS3AP29-201ENST00000437728 KRTAP3-2Q9BYR7 98 aa14.85□□□□□ -0.03
RPS3AP29-201ENST00000437728 ANO8Q9HCE9 1232 aaPredicted RBP14.84□□□□□ -0.03
RPS3AP29-201ENST00000437728 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
RPS3AP29-201ENST00000437728 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
RPS3AP29-201ENST00000437728 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms