RNA–Protein interactions for RNA: ENST00000437379.2

HDAC11-213, Transcript of histone deacetylase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC11, Length 2,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-213ENST00000437379 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
HDAC11-213ENST00000437379 DAPK1P53355 1430 aa20.11■□□□□ 0.81
HDAC11-213ENST00000437379 IRX6P78412 446 aaPredicted RBP20.11■□□□□ 0.81
HDAC11-213ENST00000437379 ABCC5O15440 1437 aa20.1■□□□□ 0.81
HDAC11-213ENST00000437379 DISP1Q96F81 1524 aa20.09■□□□□ 0.81
HDAC11-213ENST00000437379 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.81
HDAC11-213ENST00000437379 NUP153P49790 1475 aaKnown RBP20.08■□□□□ 0.81
HDAC11-213ENST00000437379 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.8
HDAC11-213ENST00000437379 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
HDAC11-213ENST00000437379 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
HDAC11-213ENST00000437379 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
HDAC11-213ENST00000437379 KIAA0586Q9BVV6 1533 aa20.04■□□□□ 0.8
HDAC11-213ENST00000437379 CCDC7Q96M83 1385 aa20.04■□□□□ 0.8
HDAC11-213ENST00000437379 RPRD2Q5VT52 1461 aaKnown RBP20.03■□□□□ 0.8
HDAC11-213ENST00000437379 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.8
HDAC11-213ENST00000437379 NCOA1Q15788 1441 aa20.02■□□□□ 0.8
HDAC11-213ENST00000437379 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
HDAC11-213ENST00000437379 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
HDAC11-213ENST00000437379 PRKRIP1Q9H875 184 aaPredicted RBP20.01■□□□□ 0.79
HDAC11-213ENST00000437379 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
HDAC11-213ENST00000437379 ZNF777Q9ULD5 760 aaPredicted RBP20.01■□□□□ 0.79
HDAC11-213ENST00000437379 TEX14Q8IWB6 1497 aa20.01■□□□□ 0.79
HDAC11-213ENST00000437379 CDK11AQ9UQ88 783 aaPredicted RBP20■□□□□ 0.79
HDAC11-213ENST00000437379 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
HDAC11-213ENST00000437379 CFDP1Q9UEE9 299 aaPredicted RBP19.99■□□□□ 0.79
HDAC11-213ENST00000437379 GRIN2AQ12879 1464 aa19.98■□□□□ 0.79
HDAC11-213ENST00000437379 KIF7Q2M1P5 1343 aa19.98■□□□□ 0.79
HDAC11-213ENST00000437379 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
HDAC11-213ENST00000437379 MRS2Q9HD23 443 aa19.97■□□□□ 0.79
HDAC11-213ENST00000437379 FBLN2P98095 1184 aa19.96■□□□□ 0.79
HDAC11-213ENST00000437379 PLB1Q6P1J6 1458 aa19.96■□□□□ 0.79
HDAC11-213ENST00000437379 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
HDAC11-213ENST00000437379 SPATA31E1Q6ZUB1 1445 aa19.94■□□□□ 0.78
HDAC11-213ENST00000437379 PZPP20742 1482 aa19.93■□□□□ 0.78
HDAC11-213ENST00000437379 CAMSAP2Q08AD1 1489 aa19.93■□□□□ 0.78
HDAC11-213ENST00000437379 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
HDAC11-213ENST00000437379 CHMP7Q8WUX9 453 aaPredicted RBP19.93■□□□□ 0.78
HDAC11-213ENST00000437379 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
HDAC11-213ENST00000437379 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
HDAC11-213ENST00000437379 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
HDAC11-213ENST00000437379 GPATCH8Q9UKJ3 1502 aaKnown RBP19.9■□□□□ 0.78
HDAC11-213ENST00000437379 KIF14Q15058 1648 aa19.9■□□□□ 0.78
HDAC11-213ENST00000437379 PKD2Q13563 968 aa19.89■□□□□ 0.77
HDAC11-213ENST00000437379 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
HDAC11-213ENST00000437379 BCL11AQ9H165 835 aa19.86■□□□□ 0.77
HDAC11-213ENST00000437379 MSH5O43196 834 aa19.85■□□□□ 0.77
HDAC11-213ENST00000437379 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
HDAC11-213ENST00000437379 KIAA1107Q9UPP5 1409 aa19.83■□□□□ 0.77
HDAC11-213ENST00000437379 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.76
HDAC11-213ENST00000437379 ZBED9Q6R2W3 1325 aa19.82■□□□□ 0.76
HDAC11-213ENST00000437379 USP47Q96K76 1375 aa19.82■□□□□ 0.76
HDAC11-213ENST00000437379 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
HDAC11-213ENST00000437379 ANKRD30AQ9BXX3 1397 aa19.8■□□□□ 0.76
HDAC11-213ENST00000437379 ITSN2Q9NZM3 1697 aa19.8■□□□□ 0.76
HDAC11-213ENST00000437379 ANKRD50Q9ULJ7 1429 aa19.79■□□□□ 0.76
HDAC11-213ENST00000437379 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
HDAC11-213ENST00000437379 DHX29Q7Z478 1369 aaKnown RBP19.79■□□□□ 0.76
HDAC11-213ENST00000437379 BCORL1Q5H9F3 1711 aa19.79■□□□□ 0.76
HDAC11-213ENST00000437379 ADGBQ8N7X0 1667 aa19.78■□□□□ 0.76
HDAC11-213ENST00000437379 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
HDAC11-213ENST00000437379 FANCIQ9NVI1 1328 aa19.78■□□□□ 0.76
HDAC11-213ENST00000437379 ADGRL2O95490 1459 aa19.78■□□□□ 0.76
HDAC11-213ENST00000437379 B4GALNT3Q6L9W6 998 aa19.78■□□□□ 0.76
HDAC11-213ENST00000437379 PPP4R2Q9NY27 417 aa19.77■□□□□ 0.76
HDAC11-213ENST00000437379 POLR1AO95602 1720 aaPredicted RBP19.77■□□□□ 0.76
HDAC11-213ENST00000437379 PLEKHD1A6NEE1 506 aa19.77■□□□□ 0.75
HDAC11-213ENST00000437379 NUP155O75694 1391 aa19.76■□□□□ 0.75
HDAC11-213ENST00000437379 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
HDAC11-213ENST00000437379 CROCC2H7BZ55 1655 aa19.75■□□□□ 0.75
HDAC11-213ENST00000437379 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
HDAC11-213ENST00000437379 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
HDAC11-213ENST00000437379 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
HDAC11-213ENST00000437379 ERICH6BQ5W0A0 696 aa19.74■□□□□ 0.75
HDAC11-213ENST00000437379 HNRNPMP52272 730 aaKnown RBP eCLIP19.73■□□□□ 0.75
HDAC11-213ENST00000437379 C9orf84Q5VXU9 1444 aa19.72■□□□□ 0.75
HDAC11-213ENST00000437379 CARD11Q9BXL7 1154 aa19.71■□□□□ 0.75
HDAC11-213ENST00000437379 ATP10BO94823 1461 aa19.71■□□□□ 0.75
HDAC11-213ENST00000437379 NUP160Q12769 1436 aa19.7■□□□□ 0.74
HDAC11-213ENST00000437379 KDM5CP41229 1560 aa19.7■□□□□ 0.74
HDAC11-213ENST00000437379 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
HDAC11-213ENST00000437379 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
HDAC11-213ENST00000437379 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
HDAC11-213ENST00000437379 ABCC10Q5T3U5 1492 aa19.68■□□□□ 0.74
HDAC11-213ENST00000437379 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
HDAC11-213ENST00000437379 ST20-MTHFSA0A0A6YYL1 179 aa19.66■□□□□ 0.74
HDAC11-213ENST00000437379 SLC24A1O60721 1099 aa19.66■□□□□ 0.74
HDAC11-213ENST00000437379 ABCA8O94911 1581 aa19.65■□□□□ 0.74
HDAC11-213ENST00000437379 KIF15Q9NS87 1388 aa19.65■□□□□ 0.74
HDAC11-213ENST00000437379 UHRF1BP1Q6BDS2 1440 aa19.64■□□□□ 0.73
HDAC11-213ENST00000437379 RALGAPBQ86X10 1494 aa19.63■□□□□ 0.73
HDAC11-213ENST00000437379 PNISRQ8TF01 805 aaKnown RBP19.62■□□□□ 0.73
HDAC11-213ENST00000437379 TMC1Q8TDI8 760 aa19.62■□□□□ 0.73
HDAC11-213ENST00000437379 SHANK2Q9UPX8 1470 aa19.61■□□□□ 0.73
HDAC11-213ENST00000437379 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
HDAC11-213ENST00000437379 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
HDAC11-213ENST00000437379 NUDCQ9Y266 331 aa19.6■□□□□ 0.73
HDAC11-213ENST00000437379 RGL3Q3MIN7 710 aa19.57■□□□□ 0.72
HDAC11-213ENST00000437379 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
HDAC11-213ENST00000437379 ROCK2O75116 1388 aaKnown RBP19.56■□□□□ 0.72
HDAC11-213ENST00000437379 KDM5DQ9BY66 1539 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms