RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 CARMIL1Q5VZK9 1371 aa14.73□□□□□ -0.05
NCSTN-206ENST00000435149 ABCA9Q8IUA7 1624 aa14.72□□□□□ -0.05
NCSTN-206ENST00000435149 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
NCSTN-206ENST00000435149 ABCA8O94911 1581 aa14.68□□□□□ -0.06
NCSTN-206ENST00000435149 ARHGEF12Q9NZN5 1544 aa14.68□□□□□ -0.06
NCSTN-206ENST00000435149 DENND4BO75064 1496 aaPredicted RBP14.68□□□□□ -0.06
NCSTN-206ENST00000435149 ZNF335Q9H4Z2 1342 aaPredicted RBP14.67□□□□□ -0.06
NCSTN-206ENST00000435149 NCOA1Q15788 1441 aa14.66□□□□□ -0.06
NCSTN-206ENST00000435149 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
NCSTN-206ENST00000435149 RICTORQ6R327 1708 aa14.66□□□□□ -0.06
NCSTN-206ENST00000435149 ZFYVE16Q7Z3T8 1539 aa14.66□□□□□ -0.06
NCSTN-206ENST00000435149 PIP4K2BP78356 416 aa14.65□□□□□ -0.06
NCSTN-206ENST00000435149 SETD1BQ9UPS6 1966 aaKnown RBP14.64□□□□□ -0.07
NCSTN-206ENST00000435149 EFCAB5A4FU69 1503 aa14.64□□□□□ -0.07
NCSTN-206ENST00000435149 ZMYM4Q5VZL5 1548 aa14.63□□□□□ -0.07
NCSTN-206ENST00000435149 RGS17Q9UGC6 210 aaPredicted RBP14.62□□□□□ -0.07
NCSTN-206ENST00000435149 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
NCSTN-206ENST00000435149 MAGI2Q86UL8 1455 aa14.61□□□□□ -0.07
NCSTN-206ENST00000435149 TOM1O60784 492 aa14.59□□□□□ -0.07
NCSTN-206ENST00000435149 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
NCSTN-206ENST00000435149 ARID3CA6NKF2 412 aa14.57□□□□□ -0.08
NCSTN-206ENST00000435149 ATP10BO94823 1461 aa14.57□□□□□ -0.08
NCSTN-206ENST00000435149 CAMSAP1Q5T5Y3 1602 aa14.54□□□□□ -0.08
NCSTN-206ENST00000435149 NCKAP5LQ9HCH0 1330 aa14.53□□□□□ -0.08
NCSTN-206ENST00000435149 HECW1Q76N89 1606 aa14.52□□□□□ -0.08
NCSTN-206ENST00000435149 ATP10AO60312 1499 aa14.52□□□□□ -0.08
NCSTN-206ENST00000435149 C9orf84Q5VXU9 1444 aa14.52□□□□□ -0.08
NCSTN-206ENST00000435149 TRAPPC8Q9Y2L5 1435 aa14.52□□□□□ -0.08
NCSTN-206ENST00000435149 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
NCSTN-206ENST00000435149 C3P01024 1663 aa14.49□□□□□ -0.09
NCSTN-206ENST00000435149 CFAP74Q9C0B2 1584 aa14.49□□□□□ -0.09
NCSTN-206ENST00000435149 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
NCSTN-206ENST00000435149 POTEAQ6S8J7 498 aa14.47□□□□□ -0.09
NCSTN-206ENST00000435149 PKD2Q13563 968 aa14.46□□□□□ -0.09
NCSTN-206ENST00000435149 RAPGEF2Q9Y4G8 1499 aa14.45□□□□□ -0.1
NCSTN-206ENST00000435149 PTPRKQ15262 1439 aa14.43□□□□□ -0.1
NCSTN-206ENST00000435149 CPS1P31327 1500 aa14.42□□□□□ -0.1
NCSTN-206ENST00000435149 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
NCSTN-206ENST00000435149 PLA2R1Q13018 1463 aa14.42□□□□□ -0.1
NCSTN-206ENST00000435149 SETD1AO15047 1707 aaKnown RBP14.41□□□□□ -0.1
NCSTN-206ENST00000435149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
NCSTN-206ENST00000435149 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
NCSTN-206ENST00000435149 ALKQ9UM73 1620 aa14.41□□□□□ -0.1
NCSTN-206ENST00000435149 SRCAPQ6ZRS2 3230 aa14.4□□□□□ -0.1
NCSTN-206ENST00000435149 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
NCSTN-206ENST00000435149 KCNA4P22459 653 aa14.4□□□□□ -0.1
NCSTN-206ENST00000435149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.1
NCSTN-206ENST00000435149 ESF1Q9H501 851 aaKnown RBP14.4□□□□□ -0.1
NCSTN-206ENST00000435149 SCAPERQ9BY12 1400 aa14.39□□□□□ -0.11
NCSTN-206ENST00000435149 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
NCSTN-206ENST00000435149 SUPT5HO00267 1087 aaKnown RBP14.37□□□□□ -0.11
NCSTN-206ENST00000435149 NPATQ14207 1427 aa14.36□□□□□ -0.11
NCSTN-206ENST00000435149 CTTNBP2Q8WZ74 1663 aa14.35□□□□□ -0.11
NCSTN-206ENST00000435149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.35□□□□□ -0.11
NCSTN-206ENST00000435149 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
NCSTN-206ENST00000435149 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
NCSTN-206ENST00000435149 CNTLNQ9NXG0 1405 aa14.32□□□□□ -0.12
NCSTN-206ENST00000435149 AGLP35573 1532 aa14.32□□□□□ -0.12
NCSTN-206ENST00000435149 REREQ9P2R6 1566 aa14.3□□□□□ -0.12
NCSTN-206ENST00000435149 PLEKHD1A6NEE1 506 aa14.3□□□□□ -0.12
NCSTN-206ENST00000435149 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
NCSTN-206ENST00000435149 RAPGEF6Q8TEU7 1601 aa14.29□□□□□ -0.12
NCSTN-206ENST00000435149 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
NCSTN-206ENST00000435149 P3H3Q8IVL6 736 aa14.28□□□□□ -0.12
NCSTN-206ENST00000435149 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
NCSTN-206ENST00000435149 CEP170BQ9Y4F5 1589 aaPredicted RBP14.27□□□□□ -0.12
NCSTN-206ENST00000435149 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
NCSTN-206ENST00000435149 NUP153P49790 1475 aaKnown RBP14.25□□□□□ -0.13
NCSTN-206ENST00000435149 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
NCSTN-206ENST00000435149 PLCH2O75038 1416 aa14.25□□□□□ -0.13
NCSTN-206ENST00000435149 ZMYM3Q14202 1370 aa14.24□□□□□ -0.13
NCSTN-206ENST00000435149 MYT1LQ9UL68 1186 aa14.24□□□□□ -0.13
NCSTN-206ENST00000435149 KDM5CP41229 1560 aa14.23□□□□□ -0.13
NCSTN-206ENST00000435149 MROH2AA6NES4 1674 aa14.23□□□□□ -0.13
NCSTN-206ENST00000435149 AFAP1Q8N556 730 aa14.22□□□□□ -0.13
NCSTN-206ENST00000435149 VWDEQ8N2E2 1590 aa14.22□□□□□ -0.13
NCSTN-206ENST00000435149 ABCA6Q8N139 1617 aa14.2□□□□□ -0.14
NCSTN-206ENST00000435149 RNF17Q9BXT8 1623 aaKnown RBP14.2□□□□□ -0.14
NCSTN-206ENST00000435149 NEURL4Q96JN8 1562 aa14.2□□□□□ -0.14
NCSTN-206ENST00000435149 EFCAB2Q5VUJ9 269 aa14.19□□□□□ -0.14
NCSTN-206ENST00000435149 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
NCSTN-206ENST00000435149 LRRC7Q96NW7 1537 aa14.16□□□□□ -0.14
NCSTN-206ENST00000435149 MLH3Q9UHC1 1453 aa14.16□□□□□ -0.14
NCSTN-206ENST00000435149 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
NCSTN-206ENST00000435149 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
NCSTN-206ENST00000435149 A2ML1A8K2U0 1454 aa14.14□□□□□ -0.15
NCSTN-206ENST00000435149 SYNMO15061 1565 aa14.11□□□□□ -0.15
NCSTN-206ENST00000435149 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
NCSTN-206ENST00000435149 FAM135BQ49AJ0 1406 aa14.1□□□□□ -0.15
NCSTN-206ENST00000435149 ANKLE2Q86XL3 938 aa14.09□□□□□ -0.15
NCSTN-206ENST00000435149 CLTCQ00610 1675 aaKnown RBP14.08□□□□□ -0.16
NCSTN-206ENST00000435149 MYO5CQ9NQX4 1742 aa14.08□□□□□ -0.16
NCSTN-206ENST00000435149 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
NCSTN-206ENST00000435149 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
NCSTN-206ENST00000435149 MED14O60244 1454 aa14.06□□□□□ -0.16
NCSTN-206ENST00000435149 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
NCSTN-206ENST00000435149 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
NCSTN-206ENST00000435149 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
NCSTN-206ENST00000435149 RXRBP28702 533 aa14.03□□□□□ -0.16
NCSTN-206ENST00000435149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms