RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
SF1-209ENST00000433274 CDC42BPAQ5VT25 1732 aa22.17■■□□□ 1.14
SF1-209ENST00000433274 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
SF1-209ENST00000433274 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
SF1-209ENST00000433274 ROCK1Q13464 1354 aa22.13■■□□□ 1.13
SF1-209ENST00000433274 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
SF1-209ENST00000433274 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
SF1-209ENST00000433274 KDM6BO15054 1643 aa22.1■■□□□ 1.13
SF1-209ENST00000433274 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
SF1-209ENST00000433274 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
SF1-209ENST00000433274 KCNH8Q96L42 1107 aa22.09■■□□□ 1.13
SF1-209ENST00000433274 NEUROD1Q13562 356 aa22.08■■□□□ 1.13
SF1-209ENST00000433274 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
SF1-209ENST00000433274 TTC37Q6PGP7 1564 aa22.06■■□□□ 1.12
SF1-209ENST00000433274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.06■■□□□ 1.121e-6■■□□□ 13.5
SF1-209ENST00000433274 PREX2Q70Z35 1606 aa22.05■■□□□ 1.12
SF1-209ENST00000433274 CROCC2H7BZ55 1655 aa22.04■■□□□ 1.12
SF1-209ENST00000433274 CDC42BPBQ9Y5S2 1711 aa22.03■■□□□ 1.12
SF1-209ENST00000433274 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
SF1-209ENST00000433274 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.12
SF1-209ENST00000433274 ADGBQ8N7X0 1667 aa22.01■■□□□ 1.11
SF1-209ENST00000433274 ADGRL2O95490 1459 aa22■■□□□ 1.11
SF1-209ENST00000433274 ARHGAP5Q13017 1502 aa22■■□□□ 1.11
SF1-209ENST00000433274 SAMD9LQ8IVG5 1584 aa22■■□□□ 1.11
SF1-209ENST00000433274 ANKRD30AQ9BXX3 1397 aa21.99■■□□□ 1.11
SF1-209ENST00000433274 C9orf84Q5VXU9 1444 aa21.98■■□□□ 1.11
SF1-209ENST00000433274 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
SF1-209ENST00000433274 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
SF1-209ENST00000433274 MBD5Q9P267 1494 aa21.97■■□□□ 1.11
SF1-209ENST00000433274 SHANK2Q9UPX8 1470 aa21.97■■□□□ 1.11
SF1-209ENST00000433274 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
SF1-209ENST00000433274 MYO5CQ9NQX4 1742 aa21.96■■□□□ 1.11
SF1-209ENST00000433274 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
SF1-209ENST00000433274 ARHGEF5Q12774 1597 aa21.95■■□□□ 1.1
SF1-209ENST00000433274 DENND4BO75064 1496 aaPredicted RBP21.94■■□□□ 1.1
SF1-209ENST00000433274 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
SF1-209ENST00000433274 TIMELESSQ9UNS1 1208 aa21.94■■□□□ 1.1
SF1-209ENST00000433274 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
SF1-209ENST00000433274 SYCP2Q9BX26 1530 aa21.92■■□□□ 1.1
SF1-209ENST00000433274 WDR7Q9Y4E6 1490 aa21.91■■□□□ 1.1
SF1-209ENST00000433274 PLCH2O75038 1416 aa21.91■■□□□ 1.1
SF1-209ENST00000433274 RSPH4AQ5TD94 716 aa21.9■■□□□ 1.1
SF1-209ENST00000433274 ANKRD50Q9ULJ7 1429 aa21.89■■□□□ 1.1
SF1-209ENST00000433274 TONSLQ96HA7 1378 aa21.88■■□□□ 1.09
SF1-209ENST00000433274 FOXD1Q16676 465 aa21.88■■□□□ 1.09
SF1-209ENST00000433274 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
SF1-209ENST00000433274 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
SF1-209ENST00000433274 PLEKHH2Q8IVE3 1493 aa21.87■■□□□ 1.09
SF1-209ENST00000433274 KIF15Q9NS87 1388 aa21.86■■□□□ 1.09
SF1-209ENST00000433274 ASXL2Q76L83 1435 aa21.85■■□□□ 1.09
SF1-209ENST00000433274 KIAA1107Q9UPP5 1409 aa21.85■■□□□ 1.09
SF1-209ENST00000433274 NPM1P06748 294 aaKnown RBP eCLIP21.84■■□□□ 1.09
SF1-209ENST00000433274 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
SF1-209ENST00000433274 ARHGEF12Q9NZN5 1544 aa21.82■■□□□ 1.08
SF1-209ENST00000433274 PZPP20742 1482 aa21.82■■□□□ 1.08
SF1-209ENST00000433274 MAST1Q9Y2H9 1570 aa21.78■■□□□ 1.08
SF1-209ENST00000433274 ANKRD30BQ9BXX2 1392 aa21.78■■□□□ 1.08
SF1-209ENST00000433274 ABCC1P33527 1531 aa21.78■■□□□ 1.08
SF1-209ENST00000433274 ARAP3Q8WWN8 1544 aa21.77■■□□□ 1.08
SF1-209ENST00000433274 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.08
SF1-209ENST00000433274 NUP155O75694 1391 aa21.76■■□□□ 1.07
SF1-209ENST00000433274 TRAPPC8Q9Y2L5 1435 aa21.75■■□□□ 1.07
SF1-209ENST00000433274 FANCAO15360 1455 aa21.73■■□□□ 1.07
SF1-209ENST00000433274 PKD2Q13563 968 aa21.73■■□□□ 1.07
SF1-209ENST00000433274 PLXNC1O60486 1568 aa21.7■■□□□ 1.06
SF1-209ENST00000433274 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
SF1-209ENST00000433274 RPRD2Q5VT52 1461 aaKnown RBP21.69■■□□□ 1.06
SF1-209ENST00000433274 KDM5DQ9BY66 1539 aa21.68■■□□□ 1.06
SF1-209ENST00000433274 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
SF1-209ENST00000433274 SPAG9O60271 1321 aaKnown RBP21.67■■□□□ 1.06
SF1-209ENST00000433274 L3MBTL2Q969R5 705 aa21.66■■□□□ 1.06
SF1-209ENST00000433274 DUOX2Q9NRD8 1548 aa21.65■■□□□ 1.06
SF1-209ENST00000433274 ADGRL1O94910 1474 aa21.64■■□□□ 1.06
SF1-209ENST00000433274 SCAPERQ9BY12 1400 aa21.63■■□□□ 1.05
SF1-209ENST00000433274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.054e-9■■■■□ 19.9
SF1-209ENST00000433274 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
SF1-209ENST00000433274 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
SF1-209ENST00000433274 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
SF1-209ENST00000433274 CD109Q6YHK3 1445 aa21.61■■□□□ 1.05
SF1-209ENST00000433274 FAM135AQ9P2D6 1515 aa21.61■■□□□ 1.05
SF1-209ENST00000433274 RTEL1-TNFRSF6BF6WH68 1400 aa21.61■■□□□ 1.05
SF1-209ENST00000433274 ERBINQ96RT1 1412 aa21.6■■□□□ 1.05
SF1-209ENST00000433274 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
SF1-209ENST00000433274 MIER1Q8N108 512 aa21.6■■□□□ 1.05
SF1-209ENST00000433274 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
SF1-209ENST00000433274 UNC13BO14795 1591 aa21.59■■□□□ 1.05
SF1-209ENST00000433274 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
SF1-209ENST00000433274 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
SF1-209ENST00000433274 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
SF1-209ENST00000433274 INO80Q9ULG1 1556 aaPredicted RBP21.54■■□□□ 1.04
SF1-209ENST00000433274 IQGAP3Q86VI3 1631 aa21.51■■□□□ 1.03
SF1-209ENST00000433274 MAGI2Q86UL8 1455 aa21.51■■□□□ 1.03
SF1-209ENST00000433274 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
SF1-209ENST00000433274 NBPF8Q3BBV2 869 aa21.5■■□□□ 1.03
SF1-209ENST00000433274 ZNF518AQ6AHZ1 1483 aa21.49■■□□□ 1.03
SF1-209ENST00000433274 POGZQ7Z3K3 1410 aa21.45■■□□□ 1.02
SF1-209ENST00000433274 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
SF1-209ENST00000433274 HSPA5P11021 654 aaKnown RBP21.44■■□□□ 1.02
SF1-209ENST00000433274 DHX29Q7Z478 1369 aaKnown RBP21.43■■□□□ 1.02
SF1-209ENST00000433274 KIDINS220Q9ULH0 1771 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms