RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 ARHGAP35Q9NRY4 1499 aa28.94■■■□□ 2.22
CNOT9-204ENST00000432877 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
CNOT9-204ENST00000432877 HECW1Q76N89 1606 aa28.94■■■□□ 2.22
CNOT9-204ENST00000432877 MLECQ14165 292 aa28.93■■■□□ 2.22
CNOT9-204ENST00000432877 RIMS1Q86UR5 1692 aaKnown RBP28.93■■■□□ 2.22
CNOT9-204ENST00000432877 ATP10AO60312 1499 aa28.92■■■□□ 2.22
CNOT9-204ENST00000432877 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
CNOT9-204ENST00000432877 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
CNOT9-204ENST00000432877 TROQ12816 1431 aaPredicted RBP28.89■■■□□ 2.22
CNOT9-204ENST00000432877 HSPA2P54652 639 aa28.88■■■□□ 2.21
CNOT9-204ENST00000432877 C9orf84Q5VXU9 1444 aa28.87■■■□□ 2.21
CNOT9-204ENST00000432877 CLIP1P30622 1438 aa28.86■■■□□ 2.21
CNOT9-204ENST00000432877 ZNF518AQ6AHZ1 1483 aa28.83■■■□□ 2.21
CNOT9-204ENST00000432877 AFAP1Q8N556 730 aa28.82■■■□□ 2.2
CNOT9-204ENST00000432877 KIF14Q15058 1648 aa28.8■■■□□ 2.2
CNOT9-204ENST00000432877 ARHGEF12Q9NZN5 1544 aa28.79■■■□□ 2.2
CNOT9-204ENST00000432877 SIGLEC1Q9BZZ2 1709 aa28.79■■■□□ 2.2
CNOT9-204ENST00000432877 MYO5CQ9NQX4 1742 aa28.78■■■□□ 2.2
CNOT9-204ENST00000432877 MYT1LQ9UL68 1186 aa28.77■■■□□ 2.2
CNOT9-204ENST00000432877 ARHGAP5Q13017 1502 aa28.77■■■□□ 2.2
CNOT9-204ENST00000432877 KDM5CP41229 1560 aa28.71■■■□□ 2.19
CNOT9-204ENST00000432877 FER1L4A9Z1Z3 1794 aa28.71■■■□□ 2.19
CNOT9-204ENST00000432877 CEBPAP49715 358 aaPredicted RBP28.71■■■□□ 2.19
CNOT9-204ENST00000432877 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.19
CNOT9-204ENST00000432877 CERKQ8TCT0 537 aa28.7■■■□□ 2.18
CNOT9-204ENST00000432877 DMRT2Q9Y5R5 561 aa28.7■■■□□ 2.18
CNOT9-204ENST00000432877 MLH3Q9UHC1 1453 aa28.7■■■□□ 2.18
CNOT9-204ENST00000432877 CCDC18Q5T9S5 1454 aa28.69■■■□□ 2.18
CNOT9-204ENST00000432877 REREQ9P2R6 1566 aa28.64■■■□□ 2.18
CNOT9-204ENST00000432877 ESF1Q9H501 851 aaKnown RBP28.64■■■□□ 2.18
CNOT9-204ENST00000432877 UHRF1BP1Q6BDS2 1440 aa28.6■■■□□ 2.17
CNOT9-204ENST00000432877 TRAPPC8Q9Y2L5 1435 aa28.6■■■□□ 2.17
CNOT9-204ENST00000432877 AGLP35573 1532 aa28.59■■■□□ 2.17
CNOT9-204ENST00000432877 DIP2CQ9Y2E4 1556 aa28.59■■■□□ 2.17
CNOT9-204ENST00000432877 PREX1Q8TCU6 1659 aa28.57■■■□□ 2.16
CNOT9-204ENST00000432877 ABCC1P33527 1531 aa28.56■■■□□ 2.16
CNOT9-204ENST00000432877 CDC42BPBQ9Y5S2 1711 aa28.56■■■□□ 2.16
CNOT9-204ENST00000432877 LRRIQ1Q96JM4 1722 aa28.55■■■□□ 2.16
CNOT9-204ENST00000432877 PREX2Q70Z35 1606 aa28.54■■■□□ 2.16
CNOT9-204ENST00000432877 SETD1BQ9UPS6 1966 aaKnown RBP28.53■■■□□ 2.16
CNOT9-204ENST00000432877 FYCO1Q9BQS8 1478 aa28.53■■■□□ 2.16
CNOT9-204ENST00000432877 CNTLNQ9NXG0 1405 aa28.52■■■□□ 2.16
CNOT9-204ENST00000432877 ZNF777Q9ULD5 760 aaPredicted RBP28.5■■■□□ 2.15
CNOT9-204ENST00000432877 ABCA6Q8N139 1617 aa28.5■■■□□ 2.15
CNOT9-204ENST00000432877 SPAG9O60271 1321 aaKnown RBP28.46■■■□□ 2.15
CNOT9-204ENST00000432877 PTPRTO14522 1441 aa28.45■■■□□ 2.15
CNOT9-204ENST00000432877 GPATCH8Q9UKJ3 1502 aaKnown RBP28.45■■■□□ 2.15
CNOT9-204ENST00000432877 CFDP1Q9UEE9 299 aaPredicted RBP28.44■■■□□ 2.14
CNOT9-204ENST00000432877 ITSN2Q9NZM3 1697 aa28.44■■■□□ 2.14
CNOT9-204ENST00000432877 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
CNOT9-204ENST00000432877 HNRNPMP52272 730 aaKnown RBP eCLIP28.43■■■□□ 2.14
CNOT9-204ENST00000432877 KIDINS220Q9ULH0 1771 aa28.41■■■□□ 2.14
CNOT9-204ENST00000432877 PLEKHH2Q8IVE3 1493 aa28.4■■■□□ 2.14
CNOT9-204ENST00000432877 SAMD9LQ8IVG5 1584 aa28.4■■■□□ 2.14
CNOT9-204ENST00000432877 STRCQ7RTU9 1775 aa28.39■■■□□ 2.14
CNOT9-204ENST00000432877 CDC42BPAQ5VT25 1732 aa28.39■■■□□ 2.14
CNOT9-204ENST00000432877 NPATQ14207 1427 aa28.38■■■□□ 2.13
CNOT9-204ENST00000432877 C3P01024 1663 aa28.38■■■□□ 2.13
CNOT9-204ENST00000432877 ZMYM3Q14202 1370 aa28.37■■■□□ 2.13
CNOT9-204ENST00000432877 CCNB3Q8WWL7 1395 aa28.37■■■□□ 2.13
CNOT9-204ENST00000432877 PPP6R1Q9UPN7 881 aa28.35■■■□□ 2.13
CNOT9-204ENST00000432877 SYCP2Q9BX26 1530 aa28.33■■■□□ 2.13
CNOT9-204ENST00000432877 MTUS2Q5JR59 1369 aa28.33■■■□□ 2.13
CNOT9-204ENST00000432877 NCOA1Q15788 1441 aa28.31■■■□□ 2.12
CNOT9-204ENST00000432877 A2MP01023 1474 aa28.28■■■□□ 2.12
CNOT9-204ENST00000432877 ATP7AQ04656 1500 aa28.27■■■□□ 2.12
CNOT9-204ENST00000432877 GGT6Q6P531 493 aa28.25■■■□□ 2.11
CNOT9-204ENST00000432877 MROH2AA6NES4 1674 aa28.25■■■□□ 2.11
CNOT9-204ENST00000432877 PKD2Q13563 968 aa28.23■■■□□ 2.11
CNOT9-204ENST00000432877 IQSEC2Q5JU85 1478 aa28.22■■■□□ 2.11
CNOT9-204ENST00000432877 PLXNC1O60486 1568 aa28.21■■■□□ 2.11
CNOT9-204ENST00000432877 INO80Q9ULG1 1556 aaPredicted RBP28.2■■■□□ 2.1
CNOT9-204ENST00000432877 RTEL1-TNFRSF6BF6WH68 1400 aa28.19■■■□□ 2.1
CNOT9-204ENST00000432877 LTBP4Q8N2S1 1624 aa28.19■■■□□ 2.1
CNOT9-204ENST00000432877 ZNF644Q9H582 1327 aaPredicted RBP28.18■■■□□ 2.1
CNOT9-204ENST00000432877 PTPRKQ15262 1439 aa28.18■■■□□ 2.1
CNOT9-204ENST00000432877 CAMSAP1Q5T5Y3 1602 aa28.18■■■□□ 2.1
CNOT9-204ENST00000432877 RSPH4AQ5TD94 716 aa28.18■■■□□ 2.1
CNOT9-204ENST00000432877 NCKAP5LQ9HCH0 1330 aa28.18■■■□□ 2.1
CNOT9-204ENST00000432877 MBD5Q9P267 1494 aa28.17■■■□□ 2.1
CNOT9-204ENST00000432877 SUPT6HQ7KZ85 1726 aaKnown RBP28.17■■■□□ 2.1
CNOT9-204ENST00000432877 CEP162Q5TB80 1403 aa28.16■■■□□ 2.1
CNOT9-204ENST00000432877 PLA2R1Q13018 1463 aa28.15■■■□□ 2.1
CNOT9-204ENST00000432877 DHX29Q7Z478 1369 aaKnown RBP28.14■■■□□ 2.1
CNOT9-204ENST00000432877 DISP3Q9P2K9 1392 aa28.14■■■□□ 2.1
CNOT9-204ENST00000432877 EHBP1L1Q8N3D4 1523 aa28.13■■■□□ 2.09
CNOT9-204ENST00000432877 TIAM1Q13009 1591 aa28.09■■■□□ 2.09
CNOT9-204ENST00000432877 CLTCQ00610 1675 aaKnown RBP28.09■■■□□ 2.09
CNOT9-204ENST00000432877 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
CNOT9-204ENST00000432877 ZNF335Q9H4Z2 1342 aaPredicted RBP28.06■■■□□ 2.08
CNOT9-204ENST00000432877 TCOF1Q13428 1488 aaKnown RBP28.06■■■□□ 2.08
CNOT9-204ENST00000432877 KIF3BO15066 747 aa28.05■■■□□ 2.08
CNOT9-204ENST00000432877 CEP170BQ9Y4F5 1589 aaPredicted RBP28.04■■■□□ 2.08
CNOT9-204ENST00000432877 A2ML1A8K2U0 1454 aa28.02■■■□□ 2.08
CNOT9-204ENST00000432877 ZNF142P52746 1687 aaPredicted RBP28.02■■■□□ 2.08
CNOT9-204ENST00000432877 MYO3AQ8NEV4 1616 aa28.02■■■□□ 2.08
CNOT9-204ENST00000432877 ILDR2Q71H61 639 aa28.01■■■□□ 2.07
CNOT9-204ENST00000432877 CCDC141Q6ZP82 1450 aa28.01■■■□□ 2.07
CNOT9-204ENST00000432877 UBAP1LF5GYI3 381 aa28■■■□□ 2.07
CNOT9-204ENST00000432877 TSPY4P0CV99 314 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms