RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 KDM6BO15054 1643 aa18.46■□□□□ 0.55
LINC00840-201ENST00000431737 ACIN1Q9UKV3 1341 aaKnown RBP18.46■□□□□ 0.55
LINC00840-201ENST00000431737 ABCC2Q92887 1545 aa18.46■□□□□ 0.55
LINC00840-201ENST00000431737 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
LINC00840-201ENST00000431737 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
LINC00840-201ENST00000431737 PREX2Q70Z35 1606 aa18.42■□□□□ 0.54
LINC00840-201ENST00000431737 SHANK2Q9UPX8 1470 aa18.42■□□□□ 0.54
LINC00840-201ENST00000431737 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
LINC00840-201ENST00000431737 UHRF1BP1LA0JNW5 1464 aa18.4■□□□□ 0.54
LINC00840-201ENST00000431737 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
LINC00840-201ENST00000431737 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
LINC00840-201ENST00000431737 CFDP1Q9UEE9 299 aaPredicted RBP18.38■□□□□ 0.53
LINC00840-201ENST00000431737 CDC42BPBQ9Y5S2 1711 aa18.38■□□□□ 0.53
LINC00840-201ENST00000431737 ZNF644Q9H582 1327 aaPredicted RBP18.37■□□□□ 0.53
LINC00840-201ENST00000431737 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
LINC00840-201ENST00000431737 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
LINC00840-201ENST00000431737 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
LINC00840-201ENST00000431737 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
LINC00840-201ENST00000431737 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.53
LINC00840-201ENST00000431737 KDM5BQ9UGL1 1544 aa18.32■□□□□ 0.52
LINC00840-201ENST00000431737 TTC37Q6PGP7 1564 aa18.32■□□□□ 0.52
LINC00840-201ENST00000431737 MYO5CQ9NQX4 1742 aa18.32■□□□□ 0.52
LINC00840-201ENST00000431737 SAMD9LQ8IVG5 1584 aa18.32■□□□□ 0.52
LINC00840-201ENST00000431737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.3■□□□□ 0.52
LINC00840-201ENST00000431737 MBD5Q9P267 1494 aa18.28■□□□□ 0.52
LINC00840-201ENST00000431737 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
LINC00840-201ENST00000431737 ANKRD30AQ9BXX3 1397 aa18.27■□□□□ 0.52
LINC00840-201ENST00000431737 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
LINC00840-201ENST00000431737 PPP1R15AO75807 674 aaPredicted RBP18.26■□□□□ 0.51
LINC00840-201ENST00000431737 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
LINC00840-201ENST00000431737 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
LINC00840-201ENST00000431737 CCDC141Q6ZP82 1450 aa18.25■□□□□ 0.51
LINC00840-201ENST00000431737 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
LINC00840-201ENST00000431737 PZPP20742 1482 aa18.24■□□□□ 0.51
LINC00840-201ENST00000431737 MPHOSPH9Q99550 1183 aa18.23■□□□□ 0.51
LINC00840-201ENST00000431737 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
LINC00840-201ENST00000431737 ARAP3Q8WWN8 1544 aa18.21■□□□□ 0.51
LINC00840-201ENST00000431737 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.5
LINC00840-201ENST00000431737 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
LINC00840-201ENST00000431737 TRIM52Q96A61 297 aa18.2■□□□□ 0.5
LINC00840-201ENST00000431737 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
LINC00840-201ENST00000431737 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
LINC00840-201ENST00000431737 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
LINC00840-201ENST00000431737 KIAA1107Q9UPP5 1409 aa18.19■□□□□ 0.5
LINC00840-201ENST00000431737 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
LINC00840-201ENST00000431737 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
LINC00840-201ENST00000431737 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
LINC00840-201ENST00000431737 PLCH2O75038 1416 aa18.15■□□□□ 0.5
LINC00840-201ENST00000431737 TEX14Q8IWB6 1497 aa18.15■□□□□ 0.5
LINC00840-201ENST00000431737 ABCC1P33527 1531 aa18.14■□□□□ 0.49
LINC00840-201ENST00000431737 MIER1Q8N108 512 aa18.14■□□□□ 0.49
LINC00840-201ENST00000431737 KIF15Q9NS87 1388 aa18.13■□□□□ 0.49
LINC00840-201ENST00000431737 UNC13BO14795 1591 aa18.12■□□□□ 0.49
LINC00840-201ENST00000431737 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
LINC00840-201ENST00000431737 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
LINC00840-201ENST00000431737 ABCA9Q8IUA7 1624 aa18.11■□□□□ 0.49
LINC00840-201ENST00000431737 WDR7Q9Y4E6 1490 aa18.11■□□□□ 0.49
LINC00840-201ENST00000431737 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
LINC00840-201ENST00000431737 HNRNPMP52272 730 aaKnown RBP eCLIP18.09■□□□□ 0.49
LINC00840-201ENST00000431737 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.49
LINC00840-201ENST00000431737 DUOX2Q9NRD8 1548 aa18.05■□□□□ 0.48
LINC00840-201ENST00000431737 MAGI2Q86UL8 1455 aa18.05■□□□□ 0.48
LINC00840-201ENST00000431737 IQGAP3Q86VI3 1631 aa18.04■□□□□ 0.48
LINC00840-201ENST00000431737 FOXD1Q16676 465 aa18.03■□□□□ 0.48
LINC00840-201ENST00000431737 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
LINC00840-201ENST00000431737 NUP155O75694 1391 aa18.02■□□□□ 0.48
LINC00840-201ENST00000431737 CENPBP07199 599 aaPredicted RBP18.02■□□□□ 0.47
LINC00840-201ENST00000431737 EFCAB2Q5VUJ9 269 aa18.02■□□□□ 0.47
LINC00840-201ENST00000431737 ERBINQ96RT1 1412 aa18.02■□□□□ 0.47
LINC00840-201ENST00000431737 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
LINC00840-201ENST00000431737 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
LINC00840-201ENST00000431737 ZFYVE16Q7Z3T8 1539 aa17.99■□□□□ 0.47
LINC00840-201ENST00000431737 RTEL1-TNFRSF6BF6WH68 1400 aa17.99■□□□□ 0.47
LINC00840-201ENST00000431737 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
LINC00840-201ENST00000431737 INO80Q9ULG1 1556 aaPredicted RBP17.98■□□□□ 0.47
LINC00840-201ENST00000431737 PKD2Q13563 968 aa17.98■□□□□ 0.47
LINC00840-201ENST00000431737 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
LINC00840-201ENST00000431737 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
LINC00840-201ENST00000431737 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.47
LINC00840-201ENST00000431737 FANCAO15360 1455 aa17.95■□□□□ 0.46
LINC00840-201ENST00000431737 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
LINC00840-201ENST00000431737 UHRF1BP1Q6BDS2 1440 aa17.93■□□□□ 0.46
LINC00840-201ENST00000431737 CFAP74Q9C0B2 1584 aa17.93■□□□□ 0.46
LINC00840-201ENST00000431737 ATP10AO60312 1499 aa17.91■□□□□ 0.46
LINC00840-201ENST00000431737 ATP7AQ04656 1500 aa17.9■□□□□ 0.46
LINC00840-201ENST00000431737 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
LINC00840-201ENST00000431737 SPATA31E1Q6ZUB1 1445 aa17.89■□□□□ 0.46
LINC00840-201ENST00000431737 NBPF8Q3BBV2 869 aa17.88■□□□□ 0.45
LINC00840-201ENST00000431737 EIF4G2P78344 907 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00840-201ENST00000431737 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
LINC00840-201ENST00000431737 ADGRL1O94910 1474 aa17.87■□□□□ 0.45
LINC00840-201ENST00000431737 RALGAPBQ86X10 1494 aa17.87■□□□□ 0.45
LINC00840-201ENST00000431737 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
LINC00840-201ENST00000431737 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
LINC00840-201ENST00000431737 PLA2R1Q13018 1463 aa17.85■□□□□ 0.45
LINC00840-201ENST00000431737 HIRIP3Q9BW71 556 aaPredicted RBP17.85■□□□□ 0.45
LINC00840-201ENST00000431737 SPAG9O60271 1321 aaKnown RBP17.85■□□□□ 0.45
LINC00840-201ENST00000431737 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
LINC00840-201ENST00000431737 KDM5CP41229 1560 aa17.84■□□□□ 0.45
LINC00840-201ENST00000431737 TET3O43151 1660 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms