RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
CDH13-203ENST00000431540 EEA1Q15075 1411 aa14.03□□□□□ -0.16
CDH13-203ENST00000431540 ATP10BO94823 1461 aa14.03□□□□□ -0.16
CDH13-203ENST00000431540 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
CDH13-203ENST00000431540 SAMD9Q5K651 1589 aa14.01□□□□□ -0.17
CDH13-203ENST00000431540 NEO1Q92859 1461 aa14□□□□□ -0.17
CDH13-203ENST00000431540 RAPGEF6Q8TEU7 1601 aa13.97□□□□□ -0.17
CDH13-203ENST00000431540 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
CDH13-203ENST00000431540 HECW2Q9P2P5 1572 aa13.96□□□□□ -0.17
CDH13-203ENST00000431540 LHX8Q68G74 356 aa13.96□□□□□ -0.17
CDH13-203ENST00000431540 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
CDH13-203ENST00000431540 ADAMTSL3P82987 1691 aa13.93□□□□□ -0.18
CDH13-203ENST00000431540 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
CDH13-203ENST00000431540 KIF21BO75037 1637 aa13.91□□□□□ -0.18
CDH13-203ENST00000431540 CFAP74Q9C0B2 1584 aa13.9□□□□□ -0.18
CDH13-203ENST00000431540 EFCAB5A4FU69 1503 aa13.89□□□□□ -0.19
CDH13-203ENST00000431540 NUP153P49790 1475 aaKnown RBP13.88□□□□□ -0.19
CDH13-203ENST00000431540 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
CDH13-203ENST00000431540 BCORL1Q5H9F3 1711 aa13.87□□□□□ -0.19
CDH13-203ENST00000431540 FHOD3Q2V2M9 1422 aa13.86□□□□□ -0.19
CDH13-203ENST00000431540 PTPRMP28827 1452 aa13.86□□□□□ -0.19
CDH13-203ENST00000431540 MAGI2Q86UL8 1455 aa13.86□□□□□ -0.19
CDH13-203ENST00000431540 RICTORQ6R327 1708 aa13.84□□□□□ -0.19
CDH13-203ENST00000431540 RAPGEF3O95398 923 aa13.84□□□□□ -0.19
CDH13-203ENST00000431540 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
CDH13-203ENST00000431540 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
CDH13-203ENST00000431540 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
CDH13-203ENST00000431540 GABBR2O75899 941 aa13.83□□□□□ -0.2
CDH13-203ENST00000431540 POGZQ7Z3K3 1410 aa13.82□□□□□ -0.2
CDH13-203ENST00000431540 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
CDH13-203ENST00000431540 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
CDH13-203ENST00000431540 ZMYM4Q5VZL5 1548 aa13.81□□□□□ -0.2
CDH13-203ENST00000431540 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
CDH13-203ENST00000431540 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
CDH13-203ENST00000431540 FANCAO15360 1455 aa13.8□□□□□ -0.2
CDH13-203ENST00000431540 CDK11AQ9UQ88 783 aaPredicted RBP13.8□□□□□ -0.2
CDH13-203ENST00000431540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDH13-203ENST00000431540 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
CDH13-203ENST00000431540 ARID3CA6NKF2 412 aa13.78□□□□□ -0.2
CDH13-203ENST00000431540 PLCH2O75038 1416 aa13.78□□□□□ -0.2
CDH13-203ENST00000431540 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
CDH13-203ENST00000431540 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.21
CDH13-203ENST00000431540 MADDQ8WXG6 1647 aa13.75□□□□□ -0.21
CDH13-203ENST00000431540 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
CDH13-203ENST00000431540 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
CDH13-203ENST00000431540 PLSCR2Q9NRY7 297 aa13.73□□□□□ -0.21
CDH13-203ENST00000431540 ZFYVE16Q7Z3T8 1539 aa13.73□□□□□ -0.21
CDH13-203ENST00000431540 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
CDH13-203ENST00000431540 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
CDH13-203ENST00000431540 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
CDH13-203ENST00000431540 ATP10AO60312 1499 aa13.71□□□□□ -0.21
CDH13-203ENST00000431540 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.21
CDH13-203ENST00000431540 HECW1Q76N89 1606 aa13.71□□□□□ -0.22
CDH13-203ENST00000431540 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
CDH13-203ENST00000431540 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
CDH13-203ENST00000431540 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
CDH13-203ENST00000431540 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
CDH13-203ENST00000431540 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
CDH13-203ENST00000431540 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
CDH13-203ENST00000431540 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
CDH13-203ENST00000431540 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
CDH13-203ENST00000431540 CLIP1P30622 1438 aa13.65□□□□□ -0.22
CDH13-203ENST00000431540 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
CDH13-203ENST00000431540 C9orf84Q5VXU9 1444 aa13.65□□□□□ -0.22
CDH13-203ENST00000431540 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
CDH13-203ENST00000431540 RANGAP1P46060 587 aaPredicted RBP13.65□□□□□ -0.22
CDH13-203ENST00000431540 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
CDH13-203ENST00000431540 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
CDH13-203ENST00000431540 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
CDH13-203ENST00000431540 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
CDH13-203ENST00000431540 KIF14Q15058 1648 aa13.64□□□□□ -0.23
CDH13-203ENST00000431540 KDM5CP41229 1560 aa13.64□□□□□ -0.23
CDH13-203ENST00000431540 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
CDH13-203ENST00000431540 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
CDH13-203ENST00000431540 PREX1Q8TCU6 1659 aa13.63□□□□□ -0.23
CDH13-203ENST00000431540 MLH3Q9UHC1 1453 aa13.62□□□□□ -0.23
CDH13-203ENST00000431540 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
CDH13-203ENST00000431540 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
CDH13-203ENST00000431540 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
CDH13-203ENST00000431540 AGLP35573 1532 aa13.59□□□□□ -0.23
CDH13-203ENST00000431540 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.24
CDH13-203ENST00000431540 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
CDH13-203ENST00000431540 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
CDH13-203ENST00000431540 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
CDH13-203ENST00000431540 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
CDH13-203ENST00000431540 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
CDH13-203ENST00000431540 PREX2Q70Z35 1606 aa13.56□□□□□ -0.24
CDH13-203ENST00000431540 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
CDH13-203ENST00000431540 HSPA2P54652 639 aa13.54□□□□□ -0.24
CDH13-203ENST00000431540 MLECQ14165 292 aa13.54□□□□□ -0.24
CDH13-203ENST00000431540 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
CDH13-203ENST00000431540 STRCQ7RTU9 1775 aa13.53□□□□□ -0.24
CDH13-203ENST00000431540 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
CDH13-203ENST00000431540 UHRF1BP1Q6BDS2 1440 aa13.53□□□□□ -0.24
CDH13-203ENST00000431540 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
CDH13-203ENST00000431540 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
CDH13-203ENST00000431540 PTPRTO14522 1441 aa13.52□□□□□ -0.25
CDH13-203ENST00000431540 ITSN2Q9NZM3 1697 aa13.52□□□□□ -0.25
CDH13-203ENST00000431540 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
CDH13-203ENST00000431540 C3P01024 1663 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms