RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 L3MBTL2Q969R5 705 aa18.85■□□□□ 0.61
NF1-204ENST00000431387 DAPK1P53355 1430 aa18.84■□□□□ 0.61
NF1-204ENST00000431387 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
NF1-204ENST00000431387 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
NF1-204ENST00000431387 KIAA0556O60303 1618 aa18.84■□□□□ 0.61
NF1-204ENST00000431387 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.61
NF1-204ENST00000431387 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
NF1-204ENST00000431387 NUP153P49790 1475 aaKnown RBP18.82■□□□□ 0.6
NF1-204ENST00000431387 CDK11AQ9UQ88 783 aaPredicted RBP18.82■□□□□ 0.6
NF1-204ENST00000431387 ABCC5O15440 1437 aa18.82■□□□□ 0.6
NF1-204ENST00000431387 ROCK1Q13464 1354 aa18.81■□□□□ 0.6
NF1-204ENST00000431387 DNMT1P26358 1616 aaKnown RBP18.79■□□□□ 0.6
NF1-204ENST00000431387 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
NF1-204ENST00000431387 ANKRD30BQ9BXX2 1392 aa18.78■□□□□ 0.6
NF1-204ENST00000431387 RAPGEF6Q8TEU7 1601 aa18.77■□□□□ 0.6
NF1-204ENST00000431387 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
NF1-204ENST00000431387 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
NF1-204ENST00000431387 RPRD2Q5VT52 1461 aaKnown RBP18.75■□□□□ 0.59
NF1-204ENST00000431387 NBPF8Q3BBV2 869 aa18.75■□□□□ 0.59
NF1-204ENST00000431387 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
NF1-204ENST00000431387 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
NF1-204ENST00000431387 EIF4G3O43432 1585 aaKnown RBP18.73■□□□□ 0.59
NF1-204ENST00000431387 PRG4Q92954 1404 aaPredicted RBP18.73■□□□□ 0.59
NF1-204ENST00000431387 TEX14Q8IWB6 1497 aa18.72■□□□□ 0.59
NF1-204ENST00000431387 NCOA1Q15788 1441 aa18.72■□□□□ 0.59
NF1-204ENST00000431387 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
NF1-204ENST00000431387 CCDC184Q52MB2 194 aa18.7■□□□□ 0.58
NF1-204ENST00000431387 TROQ12816 1431 aaPredicted RBP18.69■□□□□ 0.58
NF1-204ENST00000431387 CFDP1Q9UEE9 299 aaPredicted RBP18.69■□□□□ 0.58
NF1-204ENST00000431387 CAMSAP2Q08AD1 1489 aa18.68■□□□□ 0.58
NF1-204ENST00000431387 PLB1Q6P1J6 1458 aa18.68■□□□□ 0.58
NF1-204ENST00000431387 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
NF1-204ENST00000431387 DEKP35659 375 aaKnown RBP18.67■□□□□ 0.58
NF1-204ENST00000431387 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
NF1-204ENST00000431387 PZPP20742 1482 aa18.66■□□□□ 0.58
NF1-204ENST00000431387 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
NF1-204ENST00000431387 ZNF777Q9ULD5 760 aaPredicted RBP18.65■□□□□ 0.58
NF1-204ENST00000431387 CEP170Q5SW79 1584 aa18.65■□□□□ 0.58
NF1-204ENST00000431387 GPATCH8Q9UKJ3 1502 aaKnown RBP18.65■□□□□ 0.58
NF1-204ENST00000431387 SPATA31E1Q6ZUB1 1445 aa18.64■□□□□ 0.57
NF1-204ENST00000431387 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
NF1-204ENST00000431387 KIF14Q15058 1648 aa18.63■□□□□ 0.57
NF1-204ENST00000431387 FBLN2P98095 1184 aa18.63■□□□□ 0.57
NF1-204ENST00000431387 NBR1Q14596 966 aa18.63■□□□□ 0.57
NF1-204ENST00000431387 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
NF1-204ENST00000431387 ITSN2Q9NZM3 1697 aa18.62■□□□□ 0.57
NF1-204ENST00000431387 SYNJ2O15056 1496 aa18.61■□□□□ 0.57
NF1-204ENST00000431387 PPP4R2Q9NY27 417 aa18.6■□□□□ 0.57
NF1-204ENST00000431387 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
NF1-204ENST00000431387 ADGBQ8N7X0 1667 aa18.59■□□□□ 0.57
NF1-204ENST00000431387 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
NF1-204ENST00000431387 MRS2Q9HD23 443 aa18.59■□□□□ 0.57
NF1-204ENST00000431387 ADCY10Q96PN6 1610 aa18.58■□□□□ 0.57
NF1-204ENST00000431387 ADGRL2O95490 1459 aa18.58■□□□□ 0.57
NF1-204ENST00000431387 JPH4Q96JJ6 628 aa18.58■□□□□ 0.56
NF1-204ENST00000431387 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
NF1-204ENST00000431387 CARMIL2Q6F5E8 1435 aa18.57■□□□□ 0.56
NF1-204ENST00000431387 PKD2Q13563 968 aa18.56■□□□□ 0.56
NF1-204ENST00000431387 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
NF1-204ENST00000431387 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
NF1-204ENST00000431387 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
NF1-204ENST00000431387 MBD5Q9P267 1494 aa18.55■□□□□ 0.56
NF1-204ENST00000431387 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
NF1-204ENST00000431387 ZNF326Q5BKZ1 582 aaKnown RBP18.54■□□□□ 0.56
NF1-204ENST00000431387 NUP160Q12769 1436 aa18.53■□□□□ 0.56
NF1-204ENST00000431387 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
NF1-204ENST00000431387 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
NF1-204ENST00000431387 USP47Q96K76 1375 aa18.51■□□□□ 0.55
NF1-204ENST00000431387 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
NF1-204ENST00000431387 NOP58Q9Y2X3 529 aaKnown RBP18.49■□□□□ 0.55
NF1-204ENST00000431387 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
NF1-204ENST00000431387 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
NF1-204ENST00000431387 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
NF1-204ENST00000431387 ABCA8O94911 1581 aa18.48■□□□□ 0.55
NF1-204ENST00000431387 CDC42BPAQ5VT25 1732 aa18.48■□□□□ 0.55
NF1-204ENST00000431387 ATP10BO94823 1461 aa18.48■□□□□ 0.55
NF1-204ENST00000431387 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
NF1-204ENST00000431387 BCORL1Q5H9F3 1711 aa18.47■□□□□ 0.55
NF1-204ENST00000431387 NUP155O75694 1391 aa18.47■□□□□ 0.55
NF1-204ENST00000431387 DHX29Q7Z478 1369 aaKnown RBP18.47■□□□□ 0.55
NF1-204ENST00000431387 C9orf84Q5VXU9 1444 aa18.47■□□□□ 0.55
NF1-204ENST00000431387 PRKCSHP14314 528 aaPredicted RBP18.45■□□□□ 0.54
NF1-204ENST00000431387 ERICH6BQ5W0A0 696 aa18.45■□□□□ 0.54
NF1-204ENST00000431387 SHANK2Q9UPX8 1470 aa18.44■□□□□ 0.54
NF1-204ENST00000431387 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
NF1-204ENST00000431387 KDM5CP41229 1560 aa18.44■□□□□ 0.54
NF1-204ENST00000431387 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
NF1-204ENST00000431387 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
NF1-204ENST00000431387 UHRF1BP1Q6BDS2 1440 aa18.42■□□□□ 0.54
NF1-204ENST00000431387 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■■■■□ 25.4
NF1-204ENST00000431387 RALGAPBQ86X10 1494 aa18.4■□□□□ 0.54
NF1-204ENST00000431387 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
NF1-204ENST00000431387 CARD11Q9BXL7 1154 aa18.39■□□□□ 0.53
NF1-204ENST00000431387 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
NF1-204ENST00000431387 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
NF1-204ENST00000431387 KDM5DQ9BY66 1539 aa18.38■□□□□ 0.53
NF1-204ENST00000431387 KDM2AQ9Y2K7 1162 aa18.38■□□□□ 0.53
NF1-204ENST00000431387 ARHGEF12Q9NZN5 1544 aa18.36■□□□□ 0.53
NF1-204ENST00000431387 PTPRGP23470 1445 aa18.35■□□□□ 0.53
NF1-204ENST00000431387 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms