RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 KDM5BQ9UGL1 1544 aa20.14■□□□□ 0.81
RBM39-212ENST00000429968 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
RBM39-212ENST00000429968 ABCA8O94911 1581 aa20.13■□□□□ 0.81
RBM39-212ENST00000429968 ABCC5O15440 1437 aa20.13■□□□□ 0.81
RBM39-212ENST00000429968 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
RBM39-212ENST00000429968 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
RBM39-212ENST00000429968 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
RBM39-212ENST00000429968 TIMELESSQ9UNS1 1208 aa20.09■□□□□ 0.81
RBM39-212ENST00000429968 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
RBM39-212ENST00000429968 ITSN2Q9NZM3 1697 aa20.09■□□□□ 0.81
RBM39-212ENST00000429968 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.81
RBM39-212ENST00000429968 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
RBM39-212ENST00000429968 CDC42BPAQ5VT25 1732 aa20.07■□□□□ 0.8
RBM39-212ENST00000429968 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
RBM39-212ENST00000429968 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
RBM39-212ENST00000429968 ATP10BO94823 1461 aa20.05■□□□□ 0.8
RBM39-212ENST00000429968 TRIM52Q96A61 297 aa20.04■□□□□ 0.8
RBM39-212ENST00000429968 CROCC2H7BZ55 1655 aa20.04■□□□□ 0.8
RBM39-212ENST00000429968 FOXD1Q16676 465 aa20.03■□□□□ 0.8
RBM39-212ENST00000429968 ROCK1Q13464 1354 aa20.02■□□□□ 0.8
RBM39-212ENST00000429968 ADGBQ8N7X0 1667 aa20.01■□□□□ 0.79
RBM39-212ENST00000429968 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
RBM39-212ENST00000429968 ABCC10Q5T3U5 1492 aa19.99■□□□□ 0.79
RBM39-212ENST00000429968 CFDP1Q9UEE9 299 aaPredicted RBP19.99■□□□□ 0.79
RBM39-212ENST00000429968 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
RBM39-212ENST00000429968 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
RBM39-212ENST00000429968 KCNH8Q96L42 1107 aa19.97■□□□□ 0.79
RBM39-212ENST00000429968 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
RBM39-212ENST00000429968 SHROOM2Q13796 1616 aa19.97■□□□□ 0.79
RBM39-212ENST00000429968 PTPRGP23470 1445 aa19.93■□□□□ 0.78
RBM39-212ENST00000429968 NCOA1Q15788 1441 aa19.93■□□□□ 0.78
RBM39-212ENST00000429968 PZPP20742 1482 aa19.91■□□□□ 0.78
RBM39-212ENST00000429968 PLEKHD1A6NEE1 506 aa19.91■□□□□ 0.78
RBM39-212ENST00000429968 ADGRL2O95490 1459 aa19.9■□□□□ 0.78
RBM39-212ENST00000429968 CDC42BPBQ9Y5S2 1711 aa19.9■□□□□ 0.78
RBM39-212ENST00000429968 ANKRD30BQ9BXX2 1392 aa19.89■□□□□ 0.77
RBM39-212ENST00000429968 L3MBTL2Q969R5 705 aa19.85■□□□□ 0.77
RBM39-212ENST00000429968 RPRD2Q5VT52 1461 aaKnown RBP19.84■□□□□ 0.77
RBM39-212ENST00000429968 TEX14Q8IWB6 1497 aa19.84■□□□□ 0.77
RBM39-212ENST00000429968 SAMD9LQ8IVG5 1584 aa19.84■□□□□ 0.77
RBM39-212ENST00000429968 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
RBM39-212ENST00000429968 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
RBM39-212ENST00000429968 TTC37Q6PGP7 1564 aa19.83■□□□□ 0.76
RBM39-212ENST00000429968 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
RBM39-212ENST00000429968 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
RBM39-212ENST00000429968 SHANK2Q9UPX8 1470 aa19.79■□□□□ 0.76
RBM39-212ENST00000429968 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
RBM39-212ENST00000429968 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
RBM39-212ENST00000429968 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.76
RBM39-212ENST00000429968 ANKRD50Q9ULJ7 1429 aa19.78■□□□□ 0.76
RBM39-212ENST00000429968 NBPF8Q3BBV2 869 aa19.78■□□□□ 0.76
RBM39-212ENST00000429968 ABCC2Q92887 1545 aa19.77■□□□□ 0.76
RBM39-212ENST00000429968 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
RBM39-212ENST00000429968 HSPA5P11021 654 aaKnown RBP19.77■□□□□ 0.76
RBM39-212ENST00000429968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.77■□□□□ 0.76
RBM39-212ENST00000429968 WASHC2AQ641Q2 1341 aa19.73■□□□□ 0.75
RBM39-212ENST00000429968 SYCP2Q9BX26 1530 aa19.72■□□□□ 0.75
RBM39-212ENST00000429968 KIAA1107Q9UPP5 1409 aa19.72■□□□□ 0.75
RBM39-212ENST00000429968 ZCCHC11Q5TAX3 1644 aaKnown RBP19.72■□□□□ 0.75
RBM39-212ENST00000429968 MYO5CQ9NQX4 1742 aa19.71■□□□□ 0.75
RBM39-212ENST00000429968 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
RBM39-212ENST00000429968 PKD2Q13563 968 aa19.7■□□□□ 0.74
RBM39-212ENST00000429968 KIF15Q9NS87 1388 aa19.7■□□□□ 0.74
RBM39-212ENST00000429968 CCDC141Q6ZP82 1450 aa19.69■□□□□ 0.74
RBM39-212ENST00000429968 C11orf95C9JLR9 678 aaPredicted RBP19.69■□□□□ 0.74
RBM39-212ENST00000429968 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
RBM39-212ENST00000429968 KDM5DQ9BY66 1539 aa19.67■□□□□ 0.74
RBM39-212ENST00000429968 NUP155O75694 1391 aa19.67■□□□□ 0.74
RBM39-212ENST00000429968 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
RBM39-212ENST00000429968 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
RBM39-212ENST00000429968 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
RBM39-212ENST00000429968 ANP32CO43423 234 aa19.64■□□□□ 0.74
RBM39-212ENST00000429968 ARHGEF12Q9NZN5 1544 aa19.64■□□□□ 0.73
RBM39-212ENST00000429968 POLR1AO95602 1720 aaPredicted RBP19.63■□□□□ 0.73
RBM39-212ENST00000429968 SPATA31E1Q6ZUB1 1445 aa19.63■□□□□ 0.73
RBM39-212ENST00000429968 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
RBM39-212ENST00000429968 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
RBM39-212ENST00000429968 UHRF1BP1LA0JNW5 1464 aa19.59■□□□□ 0.73
RBM39-212ENST00000429968 FAM135AQ9P2D6 1515 aa19.58■□□□□ 0.73
RBM39-212ENST00000429968 BCORL1Q5H9F3 1711 aa19.58■□□□□ 0.72
RBM39-212ENST00000429968 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
RBM39-212ENST00000429968 UNC13BO14795 1591 aa19.56■□□□□ 0.72
RBM39-212ENST00000429968 PLXNC1O60486 1568 aa19.55■□□□□ 0.72
RBM39-212ENST00000429968 CNTLNQ9NXG0 1405 aa19.55■□□□□ 0.72
RBM39-212ENST00000429968 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
RBM39-212ENST00000429968 KDM5CP41229 1560 aa19.53■□□□□ 0.72
RBM39-212ENST00000429968 PLCH2O75038 1416 aa19.53■□□□□ 0.72
RBM39-212ENST00000429968 ABCC1P33527 1531 aa19.52■□□□□ 0.72
RBM39-212ENST00000429968 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.72
RBM39-212ENST00000429968 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
RBM39-212ENST00000429968 RSPH4AQ5TD94 716 aa19.51■□□□□ 0.71
RBM39-212ENST00000429968 SUPT16HQ9Y5B9 1047 aaKnown RBP19.5■□□□□ 0.71
RBM39-212ENST00000429968 TRAPPC8Q9Y2L5 1435 aa19.5■□□□□ 0.71
RBM39-212ENST00000429968 CCDC184Q52MB2 194 aa19.49■□□□□ 0.71
RBM39-212ENST00000429968 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
RBM39-212ENST00000429968 PLA2R1Q13018 1463 aa19.49■□□□□ 0.71
RBM39-212ENST00000429968 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
RBM39-212ENST00000429968 USP47Q96K76 1375 aa19.48■□□□□ 0.71
RBM39-212ENST00000429968 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
RBM39-212ENST00000429968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.46■□□□□ 0.714e-13■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms