RNA–Protein interactions for RNA: ENST00000429781.1

LINC00476-204, long intergenic non-protein coding RNA 476, humanhuman

TSL 2 BASIC

Gene LINC00476, Length 2,825 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-204ENST00000429781 PRG4Q92954 1404 aaPredicted RBP21.31■■□□□ 1
LINC00476-204ENST00000429781 BCL11AQ9H165 835 aa21.31■■□□□ 1
LINC00476-204ENST00000429781 CDK11AQ9UQ88 783 aaPredicted RBP21.3■■□□□ 1
LINC00476-204ENST00000429781 MPHOSPH9Q99550 1183 aa21.28■■□□□ 1
LINC00476-204ENST00000429781 TROQ12816 1431 aaPredicted RBP21.28■■□□□ 1
LINC00476-204ENST00000429781 ROCK1Q13464 1354 aa21.28■■□□□ 1
LINC00476-204ENST00000429781 NUP160Q12769 1436 aa21.28■■□□□ 1
LINC00476-204ENST00000429781 FOXD1Q16676 465 aa21.26■□□□□ 0.99
LINC00476-204ENST00000429781 KIF14Q15058 1648 aa21.25■□□□□ 0.99
LINC00476-204ENST00000429781 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
LINC00476-204ENST00000429781 JPH4Q96JJ6 628 aa21.24■□□□□ 0.99
LINC00476-204ENST00000429781 CAMSAP2Q08AD1 1489 aa21.23■□□□□ 0.99
LINC00476-204ENST00000429781 ITSN2Q9NZM3 1697 aa21.22■□□□□ 0.99
LINC00476-204ENST00000429781 ADCY10Q96PN6 1610 aa21.21■□□□□ 0.99
LINC00476-204ENST00000429781 GPATCH8Q9UKJ3 1502 aaKnown RBP21.2■□□□□ 0.98
LINC00476-204ENST00000429781 ANP32CO43423 234 aa21.2■□□□□ 0.98
LINC00476-204ENST00000429781 CFDP1Q9UEE9 299 aaPredicted RBP21.19■□□□□ 0.98
LINC00476-204ENST00000429781 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
LINC00476-204ENST00000429781 L3MBTL2Q969R5 705 aa21.16■□□□□ 0.98
LINC00476-204ENST00000429781 ANKRD30BQ9BXX2 1392 aa21.16■□□□□ 0.98
LINC00476-204ENST00000429781 ZNF777Q9ULD5 760 aaPredicted RBP21.15■□□□□ 0.98
LINC00476-204ENST00000429781 CCER2I3L3R5 266 aa21.15■□□□□ 0.98
LINC00476-204ENST00000429781 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.98
LINC00476-204ENST00000429781 HSPA5P11021 654 aaKnown RBP21.14■□□□□ 0.97
LINC00476-204ENST00000429781 ABCA8O94911 1581 aa21.14■□□□□ 0.97
LINC00476-204ENST00000429781 RPRD2Q5VT52 1461 aaKnown RBP21.14■□□□□ 0.97
LINC00476-204ENST00000429781 CROCC2H7BZ55 1655 aa21.13■□□□□ 0.97
LINC00476-204ENST00000429781 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
LINC00476-204ENST00000429781 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
LINC00476-204ENST00000429781 TEX14Q8IWB6 1497 aa21.11■□□□□ 0.97
LINC00476-204ENST00000429781 PZPP20742 1482 aa21.1■□□□□ 0.97
LINC00476-204ENST00000429781 WASHC2AQ641Q2 1341 aa21.1■□□□□ 0.97
LINC00476-204ENST00000429781 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
LINC00476-204ENST00000429781 ATP10BO94823 1461 aa21.09■□□□□ 0.97
LINC00476-204ENST00000429781 ADGRL2O95490 1459 aa21.08■□□□□ 0.97
LINC00476-204ENST00000429781 EIF4G2P78344 907 aaKnown RBP eCLIP21.08■□□□□ 0.97
LINC00476-204ENST00000429781 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
LINC00476-204ENST00000429781 PLEKHD1A6NEE1 506 aa21.06■□□□□ 0.96
LINC00476-204ENST00000429781 NBPF8Q3BBV2 869 aa21.04■□□□□ 0.96
LINC00476-204ENST00000429781 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
LINC00476-204ENST00000429781 ANKRD50Q9ULJ7 1429 aa20.99■□□□□ 0.95
LINC00476-204ENST00000429781 KIAA1107Q9UPP5 1409 aa20.98■□□□□ 0.95
LINC00476-204ENST00000429781 PTPRGP23470 1445 aa20.97■□□□□ 0.95
LINC00476-204ENST00000429781 C9orf84Q5VXU9 1444 aa20.97■□□□□ 0.95
LINC00476-204ENST00000429781 C11orf95C9JLR9 678 aaPredicted RBP20.97■□□□□ 0.95
LINC00476-204ENST00000429781 SHANK2Q9UPX8 1470 aa20.97■□□□□ 0.95
LINC00476-204ENST00000429781 CNTLNQ9NXG0 1405 aa20.97■□□□□ 0.95
LINC00476-204ENST00000429781 CHD1O14646 1710 aa20.97■□□□□ 0.95
LINC00476-204ENST00000429781 PKD2Q13563 968 aa20.95■□□□□ 0.94
LINC00476-204ENST00000429781 CCDC7Q96M83 1385 aa20.95■□□□□ 0.94
LINC00476-204ENST00000429781 MBD5Q9P267 1494 aa20.93■□□□□ 0.94
LINC00476-204ENST00000429781 ANP32EQ9BTT0 268 aa20.92■□□□□ 0.94
LINC00476-204ENST00000429781 SPATA31E1Q6ZUB1 1445 aa20.92■□□□□ 0.94
LINC00476-204ENST00000429781 HNRNPMP52272 730 aaKnown RBP eCLIP20.9■□□□□ 0.94
LINC00476-204ENST00000429781 FKBP8Q14318 412 aa20.89■□□□□ 0.94
LINC00476-204ENST00000429781 NUP155O75694 1391 aa20.89■□□□□ 0.93
LINC00476-204ENST00000429781 SAMD9LQ8IVG5 1584 aa20.88■□□□□ 0.93
LINC00476-204ENST00000429781 TSPY4P0CV99 314 aa20.88■□□□□ 0.93
LINC00476-204ENST00000429781 TSPY10P0CW01 314 aa20.88■□□□□ 0.93
LINC00476-204ENST00000429781 BCANQ96GW7 911 aa20.88■□□□□ 0.93
LINC00476-204ENST00000429781 ARHGEF5Q12774 1597 aa20.88■□□□□ 0.93
LINC00476-204ENST00000429781 PREX2Q70Z35 1606 aa20.88■□□□□ 0.93
LINC00476-204ENST00000429781 CDC42BPBQ9Y5S2 1711 aa20.88■□□□□ 0.93
LINC00476-204ENST00000429781 POLR1AO95602 1720 aaPredicted RBP20.87■□□□□ 0.93
LINC00476-204ENST00000429781 KIF15Q9NS87 1388 aa20.87■□□□□ 0.93
LINC00476-204ENST00000429781 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
LINC00476-204ENST00000429781 ZNF326Q5BKZ1 582 aaKnown RBP20.86■□□□□ 0.93
LINC00476-204ENST00000429781 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
LINC00476-204ENST00000429781 KDM5DQ9BY66 1539 aa20.85■□□□□ 0.93
LINC00476-204ENST00000429781 HNRNPUQ00839 825 aaKnown RBP eCLIP20.84■□□□□ 0.93
LINC00476-204ENST00000429781 PRKCSHP14314 528 aaPredicted RBP20.83■□□□□ 0.93
LINC00476-204ENST00000429781 CCDC141Q6ZP82 1450 aa20.83■□□□□ 0.93
LINC00476-204ENST00000429781 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
LINC00476-204ENST00000429781 CCDC184Q52MB2 194 aa20.82■□□□□ 0.92
LINC00476-204ENST00000429781 TTC37Q6PGP7 1564 aa20.82■□□□□ 0.92
LINC00476-204ENST00000429781 PRKRIP1Q9H875 184 aaPredicted RBP20.82■□□□□ 0.92
LINC00476-204ENST00000429781 USP47Q96K76 1375 aa20.8■□□□□ 0.92
LINC00476-204ENST00000429781 NEFLP07196 543 aa20.8■□□□□ 0.92
LINC00476-204ENST00000429781 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
LINC00476-204ENST00000429781 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
LINC00476-204ENST00000429781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.78■□□□□ 0.92
LINC00476-204ENST00000429781 KDM5CP41229 1560 aa20.77■□□□□ 0.92
LINC00476-204ENST00000429781 ARHGAP5Q13017 1502 aa20.77■□□□□ 0.92
LINC00476-204ENST00000429781 ABCC2Q92887 1545 aa20.76■□□□□ 0.91
LINC00476-204ENST00000429781 UHRF1BP1Q6BDS2 1440 aa20.75■□□□□ 0.91
LINC00476-204ENST00000429781 ARHGEF12Q9NZN5 1544 aa20.75■□□□□ 0.91
LINC00476-204ENST00000429781 RALGAPBQ86X10 1494 aa20.74■□□□□ 0.91
LINC00476-204ENST00000429781 FAM135AQ9P2D6 1515 aa20.74■□□□□ 0.91
LINC00476-204ENST00000429781 TSHZ2Q9NRE2 1034 aa20.73■□□□□ 0.91
LINC00476-204ENST00000429781 MRS2Q9HD23 443 aa20.72■□□□□ 0.91
LINC00476-204ENST00000429781 MYO5CQ9NQX4 1742 aa20.71■□□□□ 0.91
LINC00476-204ENST00000429781 RSPH4AQ5TD94 716 aa20.71■□□□□ 0.91
LINC00476-204ENST00000429781 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
LINC00476-204ENST00000429781 FAM9BQ8IZU0 186 aa20.7■□□□□ 0.9
LINC00476-204ENST00000429781 MAST1Q9Y2H9 1570 aa20.7■□□□□ 0.9
LINC00476-204ENST00000429781 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
LINC00476-204ENST00000429781 DHX29Q7Z478 1369 aaKnown RBP20.68■□□□□ 0.9
LINC00476-204ENST00000429781 CARD11Q9BXL7 1154 aa20.67■□□□□ 0.9
LINC00476-204ENST00000429781 DCAF11Q8TEB1 546 aa20.66■□□□□ 0.9
LINC00476-204ENST00000429781 UNC13BO14795 1591 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms