RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
SYNGAP1-203ENST00000428982 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
SYNGAP1-203ENST00000428982 PPM1GO15355 546 aaPredicted RBP19.35■□□□□ 0.69
SYNGAP1-203ENST00000428982 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
SYNGAP1-203ENST00000428982 PRG4Q92954 1404 aaPredicted RBP19.34■□□□□ 0.69
SYNGAP1-203ENST00000428982 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
SYNGAP1-203ENST00000428982 IPO9Q96P70 1041 aaKnown RBP19.33■□□□□ 0.69
SYNGAP1-203ENST00000428982 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
SYNGAP1-203ENST00000428982 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.68
SYNGAP1-203ENST00000428982 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
SYNGAP1-203ENST00000428982 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
SYNGAP1-203ENST00000428982 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
SYNGAP1-203ENST00000428982 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
SYNGAP1-203ENST00000428982 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
SYNGAP1-203ENST00000428982 MAP3K1Q13233 1512 aa19.29■□□□□ 0.68
SYNGAP1-203ENST00000428982 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
SYNGAP1-203ENST00000428982 LRRC9Q6ZRR7 1453 aa19.28■□□□□ 0.68
SYNGAP1-203ENST00000428982 USP35Q9P2H5 1018 aa19.28■□□□□ 0.68
SYNGAP1-203ENST00000428982 HSP90AA1P07900 732 aaKnown RBP19.27■□□□□ 0.67
SYNGAP1-203ENST00000428982 SIN3AQ96ST3 1273 aa19.27■□□□□ 0.67
SYNGAP1-203ENST00000428982 BRPF3Q9ULD4 1205 aa19.27■□□□□ 0.67
SYNGAP1-203ENST00000428982 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
SYNGAP1-203ENST00000428982 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
SYNGAP1-203ENST00000428982 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
SYNGAP1-203ENST00000428982 PPP1R15AO75807 674 aaPredicted RBP19.24■□□□□ 0.67
SYNGAP1-203ENST00000428982 PDE4CQ08493 712 aa19.21■□□□□ 0.67
SYNGAP1-203ENST00000428982 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
SYNGAP1-203ENST00000428982 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
SYNGAP1-203ENST00000428982 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
SYNGAP1-203ENST00000428982 EIF4G2P78344 907 aaKnown RBP eCLIP19.16■□□□□ 0.66
SYNGAP1-203ENST00000428982 GSE1Q14687 1217 aa19.16■□□□□ 0.66
SYNGAP1-203ENST00000428982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.661e-6■■■■□ 21.3
SYNGAP1-203ENST00000428982 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
SYNGAP1-203ENST00000428982 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
SYNGAP1-203ENST00000428982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.66
SYNGAP1-203ENST00000428982 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
SYNGAP1-203ENST00000428982 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
SYNGAP1-203ENST00000428982 NCOA2Q15596 1464 aa19.13■□□□□ 0.65
SYNGAP1-203ENST00000428982 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
SYNGAP1-203ENST00000428982 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
SYNGAP1-203ENST00000428982 EPRSP07814 1512 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-203ENST00000428982 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
SYNGAP1-203ENST00000428982 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
SYNGAP1-203ENST00000428982 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
SYNGAP1-203ENST00000428982 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.65
SYNGAP1-203ENST00000428982 NUP160Q12769 1436 aa19.08■□□□□ 0.65
SYNGAP1-203ENST00000428982 PNNQ9H307 717 aaKnown RBP19.07■□□□□ 0.64
SYNGAP1-203ENST00000428982 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
SYNGAP1-203ENST00000428982 RSPH4AQ5TD94 716 aa19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 CDK13Q14004 1512 aaKnown RBP19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 FAM43AQ8N2R8 423 aa19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 TROQ12816 1431 aaPredicted RBP19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
SYNGAP1-203ENST00000428982 C11orf95C9JLR9 678 aaPredicted RBP19.04■□□□□ 0.64
SYNGAP1-203ENST00000428982 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
SYNGAP1-203ENST00000428982 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
SYNGAP1-203ENST00000428982 HNRNPMP52272 730 aaKnown RBP eCLIP19.03■□□□□ 0.64
SYNGAP1-203ENST00000428982 KIAA0556O60303 1618 aa19.02■□□□□ 0.64
SYNGAP1-203ENST00000428982 SUPT6HQ7KZ85 1726 aaKnown RBP19.02■□□□□ 0.64
SYNGAP1-203ENST00000428982 ESF1Q9H501 851 aaKnown RBP19.01■□□□□ 0.63
SYNGAP1-203ENST00000428982 RRP9O43818 475 aaKnown RBP19.01■□□□□ 0.63
SYNGAP1-203ENST00000428982 RBM10P98175 930 aaKnown RBP19■□□□□ 0.63
SYNGAP1-203ENST00000428982 MRS2Q9HD23 443 aa18.99■□□□□ 0.63
SYNGAP1-203ENST00000428982 ARXQ96QS3 562 aa18.98■□□□□ 0.63
SYNGAP1-203ENST00000428982 ARID4BQ4LE39 1312 aaPredicted RBP18.97■□□□□ 0.63
SYNGAP1-203ENST00000428982 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
SYNGAP1-203ENST00000428982 MIA2Q96PC5 1412 aa18.96■□□□□ 0.63
SYNGAP1-203ENST00000428982 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 PDIA4P13667 645 aaKnown RBP18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 ZNF644Q9H582 1327 aaPredicted RBP18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
SYNGAP1-203ENST00000428982 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
SYNGAP1-203ENST00000428982 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
SYNGAP1-203ENST00000428982 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-203ENST00000428982 SPAG9O60271 1321 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-203ENST00000428982 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 WASHC2AQ641Q2 1341 aa18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
SYNGAP1-203ENST00000428982 NCLP19338 710 aaKnown RBP18.88■□□□□ 0.61
SYNGAP1-203ENST00000428982 ARHGAP5Q13017 1502 aa18.87■□□□□ 0.61
SYNGAP1-203ENST00000428982 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 FGD1P98174 961 aa18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 KANK1Q14678 1352 aa18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 NUP155O75694 1391 aa18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 CFAP43Q8NDM7 1665 aa18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 KIF14Q15058 1648 aa18.84■□□□□ 0.61
SYNGAP1-203ENST00000428982 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
SYNGAP1-203ENST00000428982 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.6
SYNGAP1-203ENST00000428982 PKD2Q13563 968 aa18.82■□□□□ 0.6
SYNGAP1-203ENST00000428982 CHD1O14646 1710 aa18.82■□□□□ 0.6
SYNGAP1-203ENST00000428982 ATP10BO94823 1461 aa18.82■□□□□ 0.6
SYNGAP1-203ENST00000428982 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms