RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 CDK11AQ9UQ88 783 aaPredicted RBP21.6■■□□□ 1.05
PCCA-206ENST00000428969 MYO5CQ9NQX4 1742 aa21.6■■□□□ 1.05
PCCA-206ENST00000428969 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
PCCA-206ENST00000428969 ATP10AO60312 1499 aa21.58■■□□□ 1.05
PCCA-206ENST00000428969 C9orf84Q5VXU9 1444 aa21.58■■□□□ 1.05
PCCA-206ENST00000428969 HSPA2P54652 639 aa21.57■■□□□ 1.04
PCCA-206ENST00000428969 ARHGEF12Q9NZN5 1544 aa21.56■■□□□ 1.04
PCCA-206ENST00000428969 MLECQ14165 292 aa21.55■■□□□ 1.04
PCCA-206ENST00000428969 KIF14Q15058 1648 aa21.55■■□□□ 1.04
PCCA-206ENST00000428969 ZNF518AQ6AHZ1 1483 aa21.54■■□□□ 1.04
PCCA-206ENST00000428969 ARHGAP35Q9NRY4 1499 aa21.54■■□□□ 1.04
PCCA-206ENST00000428969 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
PCCA-206ENST00000428969 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
PCCA-206ENST00000428969 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
PCCA-206ENST00000428969 TROQ12816 1431 aaPredicted RBP21.52■■□□□ 1.04
PCCA-206ENST00000428969 CLIP1P30622 1438 aa21.51■■□□□ 1.03
PCCA-206ENST00000428969 KDM5CP41229 1560 aa21.5■■□□□ 1.03
PCCA-206ENST00000428969 PREX1Q8TCU6 1659 aa21.5■■□□□ 1.03
PCCA-206ENST00000428969 ARHGAP5Q13017 1502 aa21.49■■□□□ 1.03
PCCA-206ENST00000428969 REREQ9P2R6 1566 aa21.46■■□□□ 1.03
PCCA-206ENST00000428969 CERKQ8TCT0 537 aa21.46■■□□□ 1.03
PCCA-206ENST00000428969 SETD1BQ9UPS6 1966 aaKnown RBP21.44■■□□□ 1.02
PCCA-206ENST00000428969 AFAP1Q8N556 730 aa21.43■■□□□ 1.02
PCCA-206ENST00000428969 MLH3Q9UHC1 1453 aa21.42■■□□□ 1.02
PCCA-206ENST00000428969 DIP2CQ9Y2E4 1556 aa21.42■■□□□ 1.02
PCCA-206ENST00000428969 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
PCCA-206ENST00000428969 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
PCCA-206ENST00000428969 UHRF1BP1Q6BDS2 1440 aa21.4■■□□□ 1.02
PCCA-206ENST00000428969 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
PCCA-206ENST00000428969 CDC42BPBQ9Y5S2 1711 aa21.4■■□□□ 1.02
PCCA-206ENST00000428969 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
PCCA-206ENST00000428969 CEBPAP49715 358 aaPredicted RBP21.39■■□□□ 1.01
PCCA-206ENST00000428969 PREX2Q70Z35 1606 aa21.39■■□□□ 1.01
PCCA-206ENST00000428969 MYT1LQ9UL68 1186 aa21.38■■□□□ 1.01
PCCA-206ENST00000428969 AGLP35573 1532 aa21.38■■□□□ 1.01
PCCA-206ENST00000428969 ABCA6Q8N139 1617 aa21.37■■□□□ 1.01
PCCA-206ENST00000428969 ABCC1P33527 1531 aa21.36■■□□□ 1.01
PCCA-206ENST00000428969 CASKIN1Q8WXD9 1431 aa21.36■■□□□ 1.01
PCCA-206ENST00000428969 STRCQ7RTU9 1775 aa21.35■■□□□ 1.01
PCCA-206ENST00000428969 ITSN2Q9NZM3 1697 aa21.33■■□□□ 1
PCCA-206ENST00000428969 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
PCCA-206ENST00000428969 C3P01024 1663 aa21.31■■□□□ 1
PCCA-206ENST00000428969 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
PCCA-206ENST00000428969 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
PCCA-206ENST00000428969 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
PCCA-206ENST00000428969 PTPRTO14522 1441 aa21.29■■□□□ 1
PCCA-206ENST00000428969 KIDINS220Q9ULH0 1771 aa21.28■■□□□ 1
PCCA-206ENST00000428969 FYCO1Q9BQS8 1478 aa21.27■■□□□ 1
PCCA-206ENST00000428969 CDC42BPAQ5VT25 1732 aa21.27■■□□□ 1
PCCA-206ENST00000428969 SAMD9LQ8IVG5 1584 aa21.23■□□□□ 0.99
PCCA-206ENST00000428969 MROH2AA6NES4 1674 aa21.21■□□□□ 0.99
PCCA-206ENST00000428969 NPATQ14207 1427 aa21.21■□□□□ 0.99
PCCA-206ENST00000428969 NCOA1Q15788 1441 aa21.2■□□□□ 0.98
PCCA-206ENST00000428969 IQSEC2Q5JU85 1478 aa21.19■□□□□ 0.98
PCCA-206ENST00000428969 PLEKHH2Q8IVE3 1493 aa21.18■□□□□ 0.98
PCCA-206ENST00000428969 SYCP2Q9BX26 1530 aa21.18■□□□□ 0.98
PCCA-206ENST00000428969 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
PCCA-206ENST00000428969 SPAG9O60271 1321 aaKnown RBP21.17■□□□□ 0.98
PCCA-206ENST00000428969 KIAA1107Q9UPP5 1409 aa21.17■□□□□ 0.98
PCCA-206ENST00000428969 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
PCCA-206ENST00000428969 LTBP4Q8N2S1 1624 aa21.15■□□□□ 0.98
PCCA-206ENST00000428969 ATP7AQ04656 1500 aa21.14■□□□□ 0.98
PCCA-206ENST00000428969 ZMYM3Q14202 1370 aa21.14■□□□□ 0.98
PCCA-206ENST00000428969 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
PCCA-206ENST00000428969 DISP3Q9P2K9 1392 aa21.12■□□□□ 0.97
PCCA-206ENST00000428969 CAMSAP1Q5T5Y3 1602 aa21.12■□□□□ 0.97
PCCA-206ENST00000428969 INO80Q9ULG1 1556 aaPredicted RBP21.12■□□□□ 0.97
PCCA-206ENST00000428969 SUPT6HQ7KZ85 1726 aaKnown RBP21.12■□□□□ 0.97
PCCA-206ENST00000428969 HNRNPMP52272 730 aaKnown RBP eCLIP21.11■□□□□ 0.97
PCCA-206ENST00000428969 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
PCCA-206ENST00000428969 A2MP01023 1474 aa21.1■□□□□ 0.97
PCCA-206ENST00000428969 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
PCCA-206ENST00000428969 ZNF142P52746 1687 aaPredicted RBP21.08■□□□□ 0.96
PCCA-206ENST00000428969 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
PCCA-206ENST00000428969 CLTCQ00610 1675 aaKnown RBP21.07■□□□□ 0.96
PCCA-206ENST00000428969 PLA2R1Q13018 1463 aa21.07■□□□□ 0.96
PCCA-206ENST00000428969 MTUS2Q5JR59 1369 aa21.06■□□□□ 0.96
PCCA-206ENST00000428969 MYO3AQ8NEV4 1616 aa21.05■□□□□ 0.96
PCCA-206ENST00000428969 ADGBQ8N7X0 1667 aa21.05■□□□□ 0.96
PCCA-206ENST00000428969 PKD2Q13563 968 aa21.04■□□□□ 0.96
PCCA-206ENST00000428969 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
PCCA-206ENST00000428969 SPATA31D1Q6ZQQ2 1576 aa21.03■□□□□ 0.96
PCCA-206ENST00000428969 CEP170BQ9Y4F5 1589 aaPredicted RBP21.02■□□□□ 0.96
PCCA-206ENST00000428969 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
PCCA-206ENST00000428969 SOCS7O14512 581 aa21.01■□□□□ 0.95
PCCA-206ENST00000428969 GGT6Q6P531 493 aa21.01■□□□□ 0.95
PCCA-206ENST00000428969 ILDR2Q71H61 639 aa21.01■□□□□ 0.95
PCCA-206ENST00000428969 NCKAP5LQ9HCH0 1330 aa21■□□□□ 0.95
PCCA-206ENST00000428969 TIAM1Q13009 1591 aa20.99■□□□□ 0.95
PCCA-206ENST00000428969 RTEL1-TNFRSF6BF6WH68 1400 aa20.99■□□□□ 0.95
PCCA-206ENST00000428969 EHBP1L1Q8N3D4 1523 aa20.99■□□□□ 0.95
PCCA-206ENST00000428969 MBD5Q9P267 1494 aa20.98■□□□□ 0.95
PCCA-206ENST00000428969 ZNF335Q9H4Z2 1342 aaPredicted RBP20.97■□□□□ 0.95
PCCA-206ENST00000428969 CEP162Q5TB80 1403 aa20.95■□□□□ 0.94
PCCA-206ENST00000428969 A2ML1A8K2U0 1454 aa20.94■□□□□ 0.94
PCCA-206ENST00000428969 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
PCCA-206ENST00000428969 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
PCCA-206ENST00000428969 ZNF644Q9H582 1327 aaPredicted RBP20.93■□□□□ 0.94
PCCA-206ENST00000428969 UBAP1LF5GYI3 381 aa20.91■□□□□ 0.94
PCCA-206ENST00000428969 DNMT1P26358 1616 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms