RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
CDH13-202ENST00000428848 CDK11AQ9UQ88 783 aaPredicted RBP12.3□□□□□ -0.44
CDH13-202ENST00000428848 CYB5RLQ6IPT4 315 aa12.29□□□□□ -0.44
CDH13-202ENST00000428848 CHMP7Q8WUX9 453 aaPredicted RBP12.29□□□□□ -0.44
CDH13-202ENST00000428848 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
CDH13-202ENST00000428848 EPRSP07814 1512 aaKnown RBP12.29□□□□□ -0.44
CDH13-202ENST00000428848 KDM6BO15054 1643 aa12.29□□□□□ -0.44
CDH13-202ENST00000428848 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
CDH13-202ENST00000428848 DISP1Q96F81 1524 aa12.28□□□□□ -0.44
CDH13-202ENST00000428848 MIA2Q96PC5 1412 aa12.27□□□□□ -0.45
CDH13-202ENST00000428848 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
CDH13-202ENST00000428848 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
CDH13-202ENST00000428848 CARMIL2Q6F5E8 1435 aa12.26□□□□□ -0.45
CDH13-202ENST00000428848 CEP170Q5SW79 1584 aa12.25□□□□□ -0.45
CDH13-202ENST00000428848 NUP160Q12769 1436 aa12.25□□□□□ -0.45
CDH13-202ENST00000428848 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
CDH13-202ENST00000428848 CNTLNQ9NXG0 1405 aa12.24□□□□□ -0.45
CDH13-202ENST00000428848 RAPGEF6Q8TEU7 1601 aa12.23□□□□□ -0.45
CDH13-202ENST00000428848 NCOA1Q15788 1441 aa12.22□□□□□ -0.45
CDH13-202ENST00000428848 POLR1AO95602 1720 aaPredicted RBP12.22□□□□□ -0.45
CDH13-202ENST00000428848 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDH13-202ENST00000428848 EIF4G2P78344 907 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDH13-202ENST00000428848 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
CDH13-202ENST00000428848 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.45
CDH13-202ENST00000428848 FANCIQ9NVI1 1328 aa12.2□□□□□ -0.46
CDH13-202ENST00000428848 CHIC2Q9UKJ5 165 aa12.2□□□□□ -0.46
CDH13-202ENST00000428848 ROCK1Q13464 1354 aa12.2□□□□□ -0.46
CDH13-202ENST00000428848 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
CDH13-202ENST00000428848 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
CDH13-202ENST00000428848 CCDC7Q96M83 1385 aa12.19□□□□□ -0.46
CDH13-202ENST00000428848 ANKRD30BQ9BXX2 1392 aa12.19□□□□□ -0.46
CDH13-202ENST00000428848 RPRD2Q5VT52 1461 aaKnown RBP12.19□□□□□ -0.46
CDH13-202ENST00000428848 TEX14Q8IWB6 1497 aa12.19□□□□□ -0.46
CDH13-202ENST00000428848 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
CDH13-202ENST00000428848 DNMT1P26358 1616 aaKnown RBP12.18□□□□□ -0.46
CDH13-202ENST00000428848 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
CDH13-202ENST00000428848 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
CDH13-202ENST00000428848 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
CDH13-202ENST00000428848 JPH4Q96JJ6 628 aa12.17□□□□□ -0.46
CDH13-202ENST00000428848 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
CDH13-202ENST00000428848 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
CDH13-202ENST00000428848 DAPK1P53355 1430 aa12.16□□□□□ -0.46
CDH13-202ENST00000428848 MSH5O43196 834 aa12.15□□□□□ -0.46
CDH13-202ENST00000428848 ADCY10Q96PN6 1610 aa12.14□□□□□ -0.47
CDH13-202ENST00000428848 ABCC5O15440 1437 aa12.14□□□□□ -0.47
CDH13-202ENST00000428848 TROQ12816 1431 aaPredicted RBP12.14□□□□□ -0.47
CDH13-202ENST00000428848 NBPF8Q3BBV2 869 aa12.14□□□□□ -0.47
CDH13-202ENST00000428848 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
CDH13-202ENST00000428848 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
CDH13-202ENST00000428848 PPP4R2Q9NY27 417 aa12.12□□□□□ -0.47
CDH13-202ENST00000428848 FOXD1Q16676 465 aa12.11□□□□□ -0.47
CDH13-202ENST00000428848 ITSN2Q9NZM3 1697 aa12.11□□□□□ -0.47
CDH13-202ENST00000428848 ABCA8O94911 1581 aa12.11□□□□□ -0.47
CDH13-202ENST00000428848 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
CDH13-202ENST00000428848 KIF7Q2M1P5 1343 aa12.1□□□□□ -0.47
CDH13-202ENST00000428848 MBD5Q9P267 1494 aa12.1□□□□□ -0.47
CDH13-202ENST00000428848 PZPP20742 1482 aa12.09□□□□□ -0.47
CDH13-202ENST00000428848 PLEKHD1A6NEE1 506 aa12.09□□□□□ -0.47
CDH13-202ENST00000428848 ARID3CA6NKF2 412 aa12.09□□□□□ -0.47
CDH13-202ENST00000428848 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
CDH13-202ENST00000428848 MRS2Q9HD23 443 aa12.08□□□□□ -0.48
CDH13-202ENST00000428848 CFDP1Q9UEE9 299 aaPredicted RBP12.08□□□□□ -0.48
CDH13-202ENST00000428848 PLB1Q6P1J6 1458 aa12.08□□□□□ -0.48
CDH13-202ENST00000428848 ADGBQ8N7X0 1667 aa12.07□□□□□ -0.48
CDH13-202ENST00000428848 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
CDH13-202ENST00000428848 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
CDH13-202ENST00000428848 BCORL1Q5H9F3 1711 aa12.05□□□□□ -0.48
CDH13-202ENST00000428848 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
CDH13-202ENST00000428848 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
CDH13-202ENST00000428848 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
CDH13-202ENST00000428848 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
CDH13-202ENST00000428848 CROCC2H7BZ55 1655 aa12.04□□□□□ -0.48
CDH13-202ENST00000428848 PTPRGP23470 1445 aa12.04□□□□□ -0.48
CDH13-202ENST00000428848 KIF14Q15058 1648 aa12.04□□□□□ -0.48
CDH13-202ENST00000428848 ERCC6L2Q5T890 1561 aa12.03□□□□□ -0.48
CDH13-202ENST00000428848 CAMSAP2Q08AD1 1489 aa12.03□□□□□ -0.48
CDH13-202ENST00000428848 GPATCH8Q9UKJ3 1502 aaKnown RBP12.03□□□□□ -0.48
CDH13-202ENST00000428848 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
CDH13-202ENST00000428848 KDM5CP41229 1560 aa12.03□□□□□ -0.48
CDH13-202ENST00000428848 DAXXQ9UER7 740 aaPredicted RBP12.02□□□□□ -0.48
CDH13-202ENST00000428848 KIAA1107Q9UPP5 1409 aa12.02□□□□□ -0.48
CDH13-202ENST00000428848 DEKP35659 375 aaKnown RBP12.02□□□□□ -0.49
CDH13-202ENST00000428848 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.49
CDH13-202ENST00000428848 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
CDH13-202ENST00000428848 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
CDH13-202ENST00000428848 ATP10BO94823 1461 aa12□□□□□ -0.49
CDH13-202ENST00000428848 UHRF1BP1Q6BDS2 1440 aa12□□□□□ -0.49
CDH13-202ENST00000428848 B4GALNT3Q6L9W6 998 aa11.99□□□□□ -0.49
CDH13-202ENST00000428848 USP47Q96K76 1375 aa11.99□□□□□ -0.49
CDH13-202ENST00000428848 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
CDH13-202ENST00000428848 RSPH4AQ5TD94 716 aa11.99□□□□□ -0.49
CDH13-202ENST00000428848 CDC42BPAQ5VT25 1732 aa11.98□□□□□ -0.49
CDH13-202ENST00000428848 SHANK2Q9UPX8 1470 aa11.98□□□□□ -0.49
CDH13-202ENST00000428848 RALGAPBQ86X10 1494 aa11.97□□□□□ -0.49
CDH13-202ENST00000428848 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
CDH13-202ENST00000428848 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
CDH13-202ENST00000428848 ZNF777Q9ULD5 760 aaPredicted RBP11.96□□□□□ -0.49
CDH13-202ENST00000428848 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
CDH13-202ENST00000428848 KDM5DQ9BY66 1539 aa11.95□□□□□ -0.5
CDH13-202ENST00000428848 ARHGEF12Q9NZN5 1544 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms