RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 PDE3BQ13370 1112 aa18.36■□□□□ 0.53
STRC-201ENST00000428650 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
STRC-201ENST00000428650 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
STRC-201ENST00000428650 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
STRC-201ENST00000428650 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
STRC-201ENST00000428650 LAS1LQ9Y4W2 734 aaKnown RBP18.34■□□□□ 0.53
STRC-201ENST00000428650 RBM19Q9Y4C8 960 aaKnown RBP18.32■□□□□ 0.52
STRC-201ENST00000428650 RAPGEF2Q9Y4G8 1499 aa18.32■□□□□ 0.52
STRC-201ENST00000428650 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
STRC-201ENST00000428650 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
STRC-201ENST00000428650 NAP1L5Q96NT1 182 aaPredicted RBP18.31■□□□□ 0.52
STRC-201ENST00000428650 ZBTB7CA1YPR0 619 aa18.31■□□□□ 0.52
STRC-201ENST00000428650 PKD2Q13563 968 aa18.31■□□□□ 0.52
STRC-201ENST00000428650 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
STRC-201ENST00000428650 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
STRC-201ENST00000428650 CHAF1AQ13111 956 aaPredicted RBP18.3■□□□□ 0.52
STRC-201ENST00000428650 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
STRC-201ENST00000428650 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
STRC-201ENST00000428650 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
STRC-201ENST00000428650 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
STRC-201ENST00000428650 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
STRC-201ENST00000428650 GBP4Q96PP9 640 aa18.28■□□□□ 0.52
STRC-201ENST00000428650 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
STRC-201ENST00000428650 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
STRC-201ENST00000428650 MSNP26038 577 aaKnown RBP18.25■□□□□ 0.51
STRC-201ENST00000428650 KCNJ4P48050 445 aa18.24■□□□□ 0.51
STRC-201ENST00000428650 FGD1P98174 961 aa18.24■□□□□ 0.51
STRC-201ENST00000428650 NUP155O75694 1391 aa18.22■□□□□ 0.51
STRC-201ENST00000428650 EFCAB2Q5VUJ9 269 aa18.22■□□□□ 0.51
STRC-201ENST00000428650 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
STRC-201ENST00000428650 SRPK2P78362 688 aaKnown RBP18.22■□□□□ 0.51
STRC-201ENST00000428650 DEKP35659 375 aaKnown RBP18.22■□□□□ 0.51
STRC-201ENST00000428650 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
STRC-201ENST00000428650 RTF1Q92541 710 aaKnown RBP18.2■□□□□ 0.5
STRC-201ENST00000428650 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
STRC-201ENST00000428650 KIF15Q9NS87 1388 aa18.19■□□□□ 0.5
STRC-201ENST00000428650 SYAP1Q96A49 352 aaPredicted RBP18.18■□□□□ 0.5
STRC-201ENST00000428650 A0A0G2JS52 829 aa18.17■□□□□ 0.5
STRC-201ENST00000428650 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
STRC-201ENST00000428650 IPO9Q96P70 1041 aaKnown RBP18.15■□□□□ 0.5
STRC-201ENST00000428650 WIZO95785 1651 aa18.15■□□□□ 0.5
STRC-201ENST00000428650 USP35Q9P2H5 1018 aa18.15■□□□□ 0.5
STRC-201ENST00000428650 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
STRC-201ENST00000428650 UACAQ9BZF9 1416 aa18.14■□□□□ 0.49
STRC-201ENST00000428650 NGEFQ8N5V2 710 aa18.14■□□□□ 0.49
STRC-201ENST00000428650 LMOD3Q0VAK6 560 aa18.14■□□□□ 0.49
STRC-201ENST00000428650 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.49
STRC-201ENST00000428650 PLCB2Q00722 1185 aa18.12■□□□□ 0.49
STRC-201ENST00000428650 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
STRC-201ENST00000428650 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
STRC-201ENST00000428650 TERF2IPQ9NYB0 399 aa18.12■□□□□ 0.49
STRC-201ENST00000428650 MYBBP1AQ9BQG0 1328 aaKnown RBP18.11■□□□□ 0.49
STRC-201ENST00000428650 HMMRO75330 724 aa18.11■□□□□ 0.49
STRC-201ENST00000428650 CSPP1Q1MSJ5 1256 aa18.11■□□□□ 0.49
STRC-201ENST00000428650 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
STRC-201ENST00000428650 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
STRC-201ENST00000428650 KIAA2012Q0VF49 1180 aa18.09■□□□□ 0.49
STRC-201ENST00000428650 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.49
STRC-201ENST00000428650 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.49
STRC-201ENST00000428650 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.49
STRC-201ENST00000428650 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
STRC-201ENST00000428650 SPAG9O60271 1321 aaKnown RBP18.07■□□□□ 0.48
STRC-201ENST00000428650 ITPRIPQ8IWB1 547 aa18.06■□□□□ 0.48
STRC-201ENST00000428650 CENPJQ9HC77 1338 aaPredicted RBP18.06■□□□□ 0.48
STRC-201ENST00000428650 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
STRC-201ENST00000428650 GPATCH3Q96I76 525 aa18.05■□□□□ 0.48
STRC-201ENST00000428650 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
STRC-201ENST00000428650 ZBED9Q6R2W3 1325 aa18.04■□□□□ 0.48
STRC-201ENST00000428650 CENPQQ7L2Z9 268 aaPredicted RBP18.04■□□□□ 0.48
STRC-201ENST00000428650 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
STRC-201ENST00000428650 GOLGA6L3A6NEY3 463 aa18.03■□□□□ 0.48
STRC-201ENST00000428650 STK31Q9BXU1 1019 aa18.03■□□□□ 0.48
STRC-201ENST00000428650 STAC3Q96MF2 364 aa18.03■□□□□ 0.48
STRC-201ENST00000428650 DRC7Q8IY82 874 aa18.03■□□□□ 0.48
STRC-201ENST00000428650 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
STRC-201ENST00000428650 CCDC34Q96HJ3 373 aa18.02■□□□□ 0.48
STRC-201ENST00000428650 TPM4P67936 248 aa18.02■□□□□ 0.48
STRC-201ENST00000428650 LMOD2Q6P5Q4 547 aa18.01■□□□□ 0.47
STRC-201ENST00000428650 CHMP4CQ96CF2 233 aa18.01■□□□□ 0.47
STRC-201ENST00000428650 CUX1P39880 1505 aa18.01■□□□□ 0.47
STRC-201ENST00000428650 CCDC144AA2RUR9 1427 aa18.01■□□□□ 0.47
STRC-201ENST00000428650 NAP1L2Q9ULW6 460 aaPredicted RBP18.01■□□□□ 0.47
STRC-201ENST00000428650 PHF14O94880 888 aa18■□□□□ 0.47
STRC-201ENST00000428650 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
STRC-201ENST00000428650 DDX11L8A8MPP1 907 aa18■□□□□ 0.47
STRC-201ENST00000428650 FOXD1Q16676 465 aa17.99■□□□□ 0.47
STRC-201ENST00000428650 GGT6Q6P531 493 aa17.99■□□□□ 0.47
STRC-201ENST00000428650 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
STRC-201ENST00000428650 AAMPQ13685 434 aa17.97■□□□□ 0.47
STRC-201ENST00000428650 TPRNQ4KMQ1 711 aa17.97■□□□□ 0.47
STRC-201ENST00000428650 E9PSI1 815 aa17.97■□□□□ 0.47
STRC-201ENST00000428650 GNL2Q13823 731 aaKnown RBP17.97■□□□□ 0.47
STRC-201ENST00000428650 CGNL1Q0VF96 1302 aa17.96■□□□□ 0.47
STRC-201ENST00000428650 SKOR2Q2VWA4 1001 aaPredicted RBP17.96■□□□□ 0.47
STRC-201ENST00000428650 NPHP1O15259 732 aa17.95■□□□□ 0.46
STRC-201ENST00000428650 ST18O60284 1047 aa17.95■□□□□ 0.46
STRC-201ENST00000428650 KIF3AQ9Y496 699 aa17.95■□□□□ 0.46
STRC-201ENST00000428650 FANCIQ9NVI1 1328 aa17.94■□□□□ 0.46
STRC-201ENST00000428650 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
STRC-201ENST00000428650 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms