RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-208ENST00000428599 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
CTNND1-208ENST00000428599 TMX4Q9H1E5 349 aaPredicted RBP11.5□□□□□ -0.57
CTNND1-208ENST00000428599 DCAF11Q8TEB1 546 aa11.5□□□□□ -0.57
CTNND1-208ENST00000428599 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
CTNND1-208ENST00000428599 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
CTNND1-208ENST00000428599 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
CTNND1-208ENST00000428599 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
CTNND1-208ENST00000428599 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
CTNND1-208ENST00000428599 U2SURPO15042 1029 aaKnown RBP11.46□□□□□ -0.57
CTNND1-208ENST00000428599 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.58
CTNND1-208ENST00000428599 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.58
CTNND1-208ENST00000428599 SETD5Q9C0A6 1442 aa11.45□□□□□ -0.58
CTNND1-208ENST00000428599 PKD2Q13563 968 aa11.45□□□□□ -0.58
CTNND1-208ENST00000428599 FRAT1Q92837 279 aaPredicted RBP11.45□□□□□ -0.58
CTNND1-208ENST00000428599 MCCP23508 829 aa11.44□□□□□ -0.58
CTNND1-208ENST00000428599 GNL2Q13823 731 aaKnown RBP11.44□□□□□ -0.58
CTNND1-208ENST00000428599 KIAA2012Q0VF49 1180 aa11.43□□□□□ -0.58
CTNND1-208ENST00000428599 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTNND1-208ENST00000428599 FOXD1Q16676 465 aa11.43□□□□□ -0.58
CTNND1-208ENST00000428599 HNRNPMP52272 730 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■■■□ 21
CTNND1-208ENST00000428599 TMF1P82094 1093 aa11.42□□□□□ -0.58
CTNND1-208ENST00000428599 RTF1Q92541 710 aaKnown RBP11.42□□□□□ -0.58
CTNND1-208ENST00000428599 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
CTNND1-208ENST00000428599 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
CTNND1-208ENST00000428599 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
CTNND1-208ENST00000428599 PRM3Q9NNZ6 103 aa11.41□□□□□ -0.58
CTNND1-208ENST00000428599 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
CTNND1-208ENST00000428599 NUP155O75694 1391 aa11.4□□□□□ -0.58
CTNND1-208ENST00000428599 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
CTNND1-208ENST00000428599 KIF3BO15066 747 aa11.4□□□□□ -0.58
CTNND1-208ENST00000428599 SOX12O15370 315 aa11.4□□□□□ -0.58
CTNND1-208ENST00000428599 STK26Q9P289 416 aa11.4□□□□□ -0.58
CTNND1-208ENST00000428599 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.59
CTNND1-208ENST00000428599 ERICH6BQ5W0A0 696 aa11.39□□□□□ -0.59
CTNND1-208ENST00000428599 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
CTNND1-208ENST00000428599 RGS3P49796 1198 aa11.38□□□□□ -0.59
CTNND1-208ENST00000428599 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
CTNND1-208ENST00000428599 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
CTNND1-208ENST00000428599 CYB5RLQ6IPT4 315 aa11.37□□□□□ -0.59
CTNND1-208ENST00000428599 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
CTNND1-208ENST00000428599 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
CTNND1-208ENST00000428599 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
CTNND1-208ENST00000428599 MPHOSPH9Q99550 1183 aa11.37□□□□□ -0.59
CTNND1-208ENST00000428599 HSCBQ8IWL3 235 aa11.36□□□□□ -0.59
CTNND1-208ENST00000428599 PTPRGP23470 1445 aa11.36□□□□□ -0.59
CTNND1-208ENST00000428599 DRC7Q8IY82 874 aa11.36□□□□□ -0.59
CTNND1-208ENST00000428599 GAPVD1Q14C86 1478 aa11.36□□□□□ -0.59
CTNND1-208ENST00000428599 G3V3G9 751 aa11.36□□□□□ -0.59
CTNND1-208ENST00000428599 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
CTNND1-208ENST00000428599 NAP1L5Q96NT1 182 aaPredicted RBP11.36□□□□□ -0.59
CTNND1-208ENST00000428599 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
CTNND1-208ENST00000428599 RAB3GAP2Q9H2M9 1393 aa11.35□□□□□ -0.59
CTNND1-208ENST00000428599 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-208ENST00000428599 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
CTNND1-208ENST00000428599 TIMELESSQ9UNS1 1208 aa11.34□□□□□ -0.59
CTNND1-208ENST00000428599 NOC3LQ8WTT2 800 aaKnown RBP11.34□□□□□ -0.59
CTNND1-208ENST00000428599 KIAA1211Q6ZU35 1233 aa11.34□□□□□ -0.59
CTNND1-208ENST00000428599 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
CTNND1-208ENST00000428599 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
CTNND1-208ENST00000428599 HDGFL2Q7Z4V5 671 aaPredicted RBP11.34□□□□□ -0.59
CTNND1-208ENST00000428599 MORC1Q86VD1 984 aa11.33□□□□□ -0.6
CTNND1-208ENST00000428599 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
CTNND1-208ENST00000428599 WASHC2CQ9Y4E1 1318 aa11.33□□□□□ -0.6
CTNND1-208ENST00000428599 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
CTNND1-208ENST00000428599 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
CTNND1-208ENST00000428599 HTATSF1O43719 755 aaKnown RBP11.31□□□□□ -0.6
CTNND1-208ENST00000428599 GORABQ5T7V8 394 aa11.31□□□□□ -0.6
CTNND1-208ENST00000428599 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
CTNND1-208ENST00000428599 CCDC34Q96HJ3 373 aa11.29□□□□□ -0.6
CTNND1-208ENST00000428599 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
CTNND1-208ENST00000428599 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-208ENST00000428599 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.62e-9■■■□□ 18.1
CTNND1-208ENST00000428599 IPO8O15397 1037 aaKnown RBP11.29□□□□□ -0.6
CTNND1-208ENST00000428599 SUPT16HQ9Y5B9 1047 aaKnown RBP11.28□□□□□ -0.6
CTNND1-208ENST00000428599 MSNP26038 577 aaKnown RBP11.28□□□□□ -0.6
CTNND1-208ENST00000428599 IGF1RP08069 1367 aa11.28□□□□□ -0.6
CTNND1-208ENST00000428599 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
CTNND1-208ENST00000428599 KRI1Q8N9T8 703 aaKnown RBP11.27□□□□□ -0.6
CTNND1-208ENST00000428599 TPM4P67936 248 aa11.27□□□□□ -0.61
CTNND1-208ENST00000428599 PPP4R2Q9NY27 417 aa11.27□□□□□ -0.61
CTNND1-208ENST00000428599 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.61
CTNND1-208ENST00000428599 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
CTNND1-208ENST00000428599 CHMP3Q9Y3E7 222 aa11.26□□□□□ -0.61
CTNND1-208ENST00000428599 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
CTNND1-208ENST00000428599 APBB1O00213 710 aa11.25□□□□□ -0.61
CTNND1-208ENST00000428599 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
CTNND1-208ENST00000428599 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
CTNND1-208ENST00000428599 EIF3AQ14152 1382 aaKnown RBP11.24□□□□□ -0.61
CTNND1-208ENST00000428599 PTMSP20962 102 aa11.24□□□□□ -0.61
CTNND1-208ENST00000428599 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-208ENST00000428599 STK31Q9BXU1 1019 aa11.23□□□□□ -0.61
CTNND1-208ENST00000428599 NESP48681 1621 aa11.23□□□□□ -0.61
CTNND1-208ENST00000428599 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-208ENST00000428599 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
CTNND1-208ENST00000428599 HSP90B1P14625 803 aaKnown RBP11.22□□□□□ -0.61
CTNND1-208ENST00000428599 VPS53Q5VIR6 699 aa11.22□□□□□ -0.61
CTNND1-208ENST00000428599 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
CTNND1-208ENST00000428599 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-208ENST00000428599 PRDM2Q13029 1718 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms